Basic Information

Insect: Calameuta pallipes
Gene Symbol: -
Assembly: GCA_030142375.1
Location: JARQSW010000388.1:3098552-3102040[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.41 32 5.5 2.5 1 23 499 521 499 521 0.97

2 8 0.12 9.3 7.1 1.9 3 23 534 555 534 555 0.96

3 8 6.7e-05 0.0053 17.4 0.6 3 23 596 616 596 616 0.99

4 8 0.0002 0.016 15.8 1.8 3 23 624 644 622 644 0.95

5 8 3.6e-06 0.00028 21.4 1.0 1 23 652 674 652 674 0.98

6 8 2.1e-05 0.0016 19.0 1.5 1 23 706 728 706 728 0.99

7 8 0.14 11 6.9 2.3 2 23 738 760 737 760 0.93

8 8 0.18 14 6.6 0.2 1 19 771 789 771 792 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.41	32	5.5	2.5	1	23	499	521	499	521	0.97
2	8	0.12	9.3	7.1	1.9	3	23	534	555	534	555	0.96
3	8	6.7e-05	0.0053	17.4	0.6	3	23	596	616	596	616	0.99
4	8	0.0002	0.016	15.8	1.8	3	23	624	644	622	644	0.95
5	8	3.6e-06	0.00028	21.4	1.0	1	23	652	674	652	674	0.98
6	8	2.1e-05	0.0016	19.0	1.5	1	23	706	728	706	728	0.99
7	8	0.14	11	6.9	2.3	2	23	738	760	737	760	0.93
8	8	0.18	14	6.6	0.2	1	19	771	789	771	792	0.93

Sequence Information

Coding Sequence: atggtacGTGTTTTGGATTTCTGCACAACTTGCCGTCTTTGTGCAAAAGCATATAGTATTGAAAAGCTGGTAAAGATTTTTAGCAGTCGAGGGAATTCTTTAAACCTCAAAAATAGCATTAATTTGCACCTTCCTATAAAGGTGACAGAAAAAGATAATCTgcctttaaatatttgtatcatgtGCCTACGTCGAATAAATGCCAccaacgaattttttaatactattatTTCGTCAGATAAATTgttcaataaaatcttaagAAAGAAACAGAGTAAGCATTCATCTTCATCTGATACTCATAAAGGATCGAATGagcaaaagcaaagaaatCCATTTTTGATCACAGTAGAAGCATCTGATTCTACGAAGAAAACTAACTCTGGAGTTATCATGAAATCAGCAAACATAGATGCAGAGTATCAGTATATCGAATATATAGAATGCAATTCAAAAGATAGTACTGAACAAATTTGtagaactattgaaaataacaaattagTGAGTGATATACATGACAAATGTACAAAGAACGCAGTAGATTCTTCAGTAAAAGATGGTATAACGAAAATTGATGATTTGTCAGTATTTGCCATAGAGTCAAAGATAAATCATAATTCTTTATGTATAGAAAATGATAATGTACATGCTACTGAACATAGAAGTATATCAATATCTGACAGTCaacatattatacaaaatgagAACTTAGACAGCTCTGGGAATGATTTAACAATAGTTCCTAAGACAAGTGCTGTTTTAATTTCTATGAAGAACAATGTTGCAACTTTTAATGGAAATTGGCAATCATCAAATGATATATTACAACAGAAAGATTATCAATgcaatgtaataaataaaaatgaatctgTAATTGTTTCAACAGAAGCTGCAACTACTGTAGTACATAAATCAATCAACAACCAGATTGTATATAATGACTTTGGAAAACAGCAGCCACTAATATGTAGTGATCCAAAACAAAATGAGTATATCGTTGGAAATATCAATATCTTGAGCAATGATAATAGCAGCGTAATGCTGAAAGGAAGTAGTAATGTAGTAATAGGCGTCGCAAACAGTGTAATTGCGAAAAATTCAGCAAAAATACCCTTAGAAGTTCTGCGATGTCCTGATTGCGAAGAAAGTGTCAAGATTTTCTCATTGGAGGAGCGGCGGCTGTTTTTTGCTTACTTGAAGCAACATTCGTGCAATAAAGCGAACAATCAAGAAAACTCGACgagtaaatataaaagcaaCCAGGTTGTTGAATCCTTTTCCGAGTACAAGGAGAAATatcagacgaaaaaaaaaaaaagaaaggaaaaccAAGAAGTAGGAGATTTAGGAAAATCATCGTCGAGGTCATGGCCGGACGGTGATCTTCCTGCTGATCCTGGACCAGATCCTGCACCGCAAGAGGACATCTTTGAAGACGACGTTAGATTGGATGATGACTTTCATTGGCCAATGCCAAAGCGAAATCGTCGATTGCATCGATGCCTCTCTTGTGATTTTATCACAAAAAGTGCAGTCAGATTGAAATCTCATCAAAAACTACATCGAATGGATAAGagacaaaatatttactaCACAGGTTGTCGACATTGTTATAAACAATTTGAAACAAGTGTTGAAGCAAGGAAGCATGAAAGACTAGTACATATTTCCAATGGTGCAAAAAATAGTTTGTGCGAATACTGTGGACTTATGAAACCACAAAAGACATTACGAGATCATATCTTAAAGCAGCACACAGTGGAGTCCGAAATAGAGATGCAAGGGTGTAACGTCTGTGGAAAAATGTTTATCTCACCAACGAGCTTATATTTGCATAAGAAAACACATTCTATAGAGAGGCAACATTTGTGTGATCTGTGTGGTAAGGCATTCAAACAACGTATGGCTATGCGTCGGCATTACATGCTGCACTTTCCACGTGCACCGCCTAAATTCACTTGTAACGTATGCGATAAAAGAGTAACTACAAGAGGATCCTTACGTCTGCATATGATGCGACACACTGGTGAAAAGCCTCAAAAATGTCCAGAGTGTCACATGGTTATGCGTCATGGCCTAAAACATCACATGCGTTTGCATTCCGATGATGCACCCTTTAAATGCGTTGTGTGTGATGCTGATTTCAAACGAAGAGATTATATAAGACGTCACATGCGAAAGCATCTAAACGATACACAGAGCCAGCTATTGCACTGCTCCACTTGCAATTATGCGTTCGATGATATTAAATCGTTTTTAATACATCATCGAGATGTGCATAACAATGAGATTTTTACTCAGATAAAAACTTACGAGTGCAAACGTTGCACTGCGCAATTTATAGACTCTTCCCGGTATAGGGATCACGAGGAAATTTGTCAGAGTTTGCAGGAAAACACACGAGATAAAATGTATTCTGATATTGAGCAAACTTACATCCCCAATAGTTATTCTAAAGCAGTTGGGGACTTGCAAAAGTCTTGCGGAAGAATTATAATCGGTTCTTGCAATGACAGTACCTGCAACTGCATAGACAATACATGCATGAACTATGCTAATCGAAATTGCATAAGCTCTGTATGCGCTAGCGATAATAATGTCACAGACTTATGCACGATTCCTATAAGTTCATGTAGTAGCAGTGCATCTCTAGACGCGAACCTCCTAAACAGAAGTTGTACAAATTTAGTATATTCTGGTACTAATAATGTGCCTAACACTCGTACGTATTCACCTACCAAAATAGTGGATCACGCAAAGAAGTCGGGTCCTCGTGTGATTCTTAATCAGAAACTTACTAGTAACTATGACTATAGATTTTGTCAAAATCGAATTAAGTCTAGTCAAGAATTTCGTAGGTTGAAGAAAATTGAGGAGCCTGTTTTACTAAATGATGGACCTACGACAATCGTCCTTTCGGAGCAGGTCACGCATTTAGATCCTGCATCGGAGTACGCTTATCTGAACATggacaaacaaaatattcgtGACAAGAATGTACTATTGGAAGTAGAAGAGGATATGATTCCAAATGCTACTGTTcatgaatatgaaaatcacatagaacatttttcaagtaattcaTCCCCTGATCAACTTCAGGCTCAGCTCTGTCTGCCATCATCGAGTAGTAACAATATCTACGTAAGAGAGCCCATATCTTGGAAACAATTGTAA
Protein Sequence: MVRVLDFCTTCRLCAKAYSIEKLVKIFSSRGNSLNLKNSINLHLPIKVTEKDNLPLNICIMCLRRINATNEFFNTIISSDKLFNKILRKKQSKHSSSSDTHKGSNEQKQRNPFLITVEASDSTKKTNSGVIMKSANIDAEYQYIEYIECNSKDSTEQICRTIENNKLVSDIHDKCTKNAVDSSVKDGITKIDDLSVFAIESKINHNSLCIENDNVHATEHRSISISDSQHIIQNENLDSSGNDLTIVPKTSAVLISMKNNVATFNGNWQSSNDILQQKDYQCNVINKNESVIVSTEAATTVVHKSINNQIVYNDFGKQQPLICSDPKQNEYIVGNINILSNDNSSVMLKGSSNVVIGVANSVIAKNSAKIPLEVLRCPDCEESVKIFSLEERRLFFAYLKQHSCNKANNQENSTSKYKSNQVVESFSEYKEKYQTKKKKRKENQEVGDLGKSSSRSWPDGDLPADPGPDPAPQEDIFEDDVRLDDDFHWPMPKRNRRLHRCLSCDFITKSAVRLKSHQKLHRMDKRQNIYYTGCRHCYKQFETSVEARKHERLVHISNGAKNSLCEYCGLMKPQKTLRDHILKQHTVESEIEMQGCNVCGKMFISPTSLYLHKKTHSIERQHLCDLCGKAFKQRMAMRRHYMLHFPRAPPKFTCNVCDKRVTTRGSLRLHMMRHTGEKPQKCPECHMVMRHGLKHHMRLHSDDAPFKCVVCDADFKRRDYIRRHMRKHLNDTQSQLLHCSTCNYAFDDIKSFLIHHRDVHNNEIFTQIKTYECKRCTAQFIDSSRYRDHEEICQSLQENTRDKMYSDIEQTYIPNSYSKAVGDLQKSCGRIIIGSCNDSTCNCIDNTCMNYANRNCISSVCASDNNVTDLCTIPISSCSSSASLDANLLNRSCTNLVYSGTNNVPNTRTYSPTKIVDHAKKSGPRVILNQKLTSNYDYRFCQNRIKSSQEFRRLKKIEEPVLLNDGPTTIVLSEQVTHLDPASEYAYLNMDKQNIRDKNVLLEVEEDMIPNATVHEYENHIEHFSSNSSPDQLQAQLCLPSSSSNNIYVREPISWKQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00292536;
90% Identity: iTF_00297134;
80% Identity: -