Basic Information

Insect: Calameuta pallipes
Gene Symbol: ZNF236_1
Assembly: GCA_030142375.1
Location: JARQSW010000603.1:34438-50139[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 9.2e-05 0.0072 16.9 1.4 2 23 179 200 178 200 0.96

2 28 4.5e-05 0.0035 17.9 0.6 1 23 206 228 206 228 0.98

3 28 8.9e-06 0.0007 20.1 0.3 2 23 234 255 234 255 0.97

4 28 0.009 0.71 10.7 0.2 3 23 263 283 261 283 0.96

5 28 8.7e-05 0.0069 17.0 1.0 2 23 294 315 294 315 0.98

6 28 7.9e-07 6.2e-05 23.4 1.3 1 23 336 358 336 358 0.99

7 28 2.8e-05 0.0022 18.6 0.7 1 20 364 383 364 386 0.94

8 28 0.00026 0.02 15.5 0.2 3 23 394 415 393 415 0.97

9 28 0.00054 0.042 14.5 3.7 1 23 424 447 424 447 0.98

10 28 3.1e-07 2.4e-05 24.7 2.8 1 23 565 587 565 587 0.99

11 28 0.00063 0.05 14.3 3.8 1 23 593 615 593 615 0.99

12 28 0.73 58 4.7 4.8 1 23 621 643 621 643 0.98

13 28 2.9e-05 0.0023 18.5 1.7 1 23 647 669 647 669 0.98

14 28 0.00042 0.033 14.9 3.6 1 23 724 746 724 746 0.98

15 28 5.5e-05 0.0043 17.6 5.0 1 23 752 774 752 774 0.99

16 28 3.9e-05 0.0031 18.1 2.4 1 23 780 802 780 802 0.97

17 28 0.00013 0.01 16.5 7.2 1 23 808 830 808 830 0.98

18 28 1.5e-06 0.00012 22.6 4.1 1 23 1152 1174 1152 1174 0.99

19 28 0.068 5.3 7.9 0.8 2 23 1198 1219 1197 1219 0.97

20 28 9.9e-05 0.0078 16.8 2.9 1 23 1225 1247 1225 1247 0.99

21 28 3.3e-05 0.0026 18.3 3.4 2 23 1254 1275 1253 1275 0.97

22 28 6.6e-07 5.2e-05 23.7 1.6 2 23 1349 1370 1348 1370 0.98

23 28 0.04 3.1 8.6 5.2 1 23 1376 1398 1376 1398 0.96

24 28 0.00017 0.013 16.1 1.6 1 23 1404 1426 1404 1426 0.98

25 28 0.0024 0.19 12.5 3.0 1 23 1432 1454 1432 1454 0.98

26 28 0.0003 0.024 15.3 1.9 2 23 1668 1689 1667 1689 0.97

27 28 3e-05 0.0024 18.4 4.0 1 23 1695 1717 1695 1717 0.98

28 28 2.1e-05 0.0017 18.9 6.6 1 23 1723 1746 1723 1746 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	9.2e-05	0.0072	16.9	1.4	2	23	179	200	178	200	0.96
2	28	4.5e-05	0.0035	17.9	0.6	1	23	206	228	206	228	0.98
3	28	8.9e-06	0.0007	20.1	0.3	2	23	234	255	234	255	0.97
4	28	0.009	0.71	10.7	0.2	3	23	263	283	261	283	0.96
5	28	8.7e-05	0.0069	17.0	1.0	2	23	294	315	294	315	0.98
6	28	7.9e-07	6.2e-05	23.4	1.3	1	23	336	358	336	358	0.99
7	28	2.8e-05	0.0022	18.6	0.7	1	20	364	383	364	386	0.94
8	28	0.00026	0.02	15.5	0.2	3	23	394	415	393	415	0.97
9	28	0.00054	0.042	14.5	3.7	1	23	424	447	424	447	0.98
10	28	3.1e-07	2.4e-05	24.7	2.8	1	23	565	587	565	587	0.99
11	28	0.00063	0.05	14.3	3.8	1	23	593	615	593	615	0.99
12	28	0.73	58	4.7	4.8	1	23	621	643	621	643	0.98
13	28	2.9e-05	0.0023	18.5	1.7	1	23	647	669	647	669	0.98
14	28	0.00042	0.033	14.9	3.6	1	23	724	746	724	746	0.98
15	28	5.5e-05	0.0043	17.6	5.0	1	23	752	774	752	774	0.99
16	28	3.9e-05	0.0031	18.1	2.4	1	23	780	802	780	802	0.97
17	28	0.00013	0.01	16.5	7.2	1	23	808	830	808	830	0.98
18	28	1.5e-06	0.00012	22.6	4.1	1	23	1152	1174	1152	1174	0.99
19	28	0.068	5.3	7.9	0.8	2	23	1198	1219	1197	1219	0.97
20	28	9.9e-05	0.0078	16.8	2.9	1	23	1225	1247	1225	1247	0.99
21	28	3.3e-05	0.0026	18.3	3.4	2	23	1254	1275	1253	1275	0.97
22	28	6.6e-07	5.2e-05	23.7	1.6	2	23	1349	1370	1348	1370	0.98
23	28	0.04	3.1	8.6	5.2	1	23	1376	1398	1376	1398	0.96
24	28	0.00017	0.013	16.1	1.6	1	23	1404	1426	1404	1426	0.98
25	28	0.0024	0.19	12.5	3.0	1	23	1432	1454	1432	1454	0.98
26	28	0.0003	0.024	15.3	1.9	2	23	1668	1689	1667	1689	0.97
27	28	3e-05	0.0024	18.4	4.0	1	23	1695	1717	1695	1717	0.98
28	28	2.1e-05	0.0017	18.9	6.6	1	23	1723	1746	1723	1746	0.96

Sequence Information

Coding Sequence: ATGTTGACGCAGCATACTGTTGTCACAGAGTCTGTGGCCTCTGCCATTGACACACTACCTTtgggatttattatttctgatgATGGACATACACTATTAGCAGTAACTGAAAGAGATGATGGTGCCGTGGAATTCATGACAGTCCCAGTGGCTTTTATACATCAGAACCATACTGCAGTACAATCTACActaaaaggaaataatgaaaattcaatttttcaaattagttTGGATGGTGATGTTACTACGGGAATCCAGCATTCTACATTTGTACCTACACAGCCTTCTCAACCATTACCTATTATTACATATGAGATGCAAGTATctgaaactgaaaaaaaaaatggaatagaAACTGACGTGGAACAATATAGTATTCCAAGTTcattgaatttggaaaatccaATTTCAAATAAGTCACAAGGAAATGTTGGATCCGAATCTCAAATTCCTATTGAAAAACCAGTTGCAAAGAGAAGTCCTGGTCGGCCAAGAAAAGATGAGACTATACTTTCTATTAAATCAAATAACTTGCAATGTGAAATTTGTGGTCAAGAATTTACTCGGCAAATGTTGTATAAAAAACATATCGAACATCATGCTGAAGAAAAGCCACATCGTTGCCCAAAGTGTCCTGCTTCTTTTAATGTCCCTACGAATTTCACGCTTCATATGGCCACACACAACACTGGGGAGCCAAAGTGTCCTGAATGTGGTAGAAAGTTTGCCAGAATGGCAAGCCTGAAATCACATATGTTGCTACATGAAAAGGAGGAGAACCTCTTCTGTACTGAATGCGAGGATGCATTTTCTACAAAAgCACAGCTTGATGCACATTTGAAACTTCACAATGAAAAGTGGTCAACGGAGGATGTGCGAAAATGCAAGCTTTGCAATAAACAATTTACCCAGCCAGCTCTCTATCGACTTCACATACGAGAGCATTACAGGTTGCAAACCAAGATAGTGAAACACACTAAAAGAGGAACGAAGCACAAAACTATGTATAAGTGCAAAATATGCCTAAAGTCTTTCCAAAAACCAAGCCAGCTGATGAGACACATTAGAGTGCACACTGGCGAAAAACCCTTTAAGTGTAATGTCTGTAGTCGAGCTTTCACACAAAAAGGATCTCTACAAATTCACATGTGGAAACATAACGGCATAAGGCCCCATGGATGCACATTGTGCAGTGCCAAATTCAGTCAAAAGGGTAATCTGAATGCACATATACTCAGAGTACACAGCGTGCCAGAGGGCGAACCAATTTATAGATGCACCTATTGTTCTTGCGTCTTCAAAAAACTGGGTAGTCTCAATGGACACATGAAAAGGATGCACTCAAATCCCGTGGAGGACAAATCGAGTTGCGACAATTCCACGGAAGCAGATATGCAAGCCACCGTGGACACTGTAATCTCACAATTAGCCTCTCTGGAGTCTGGCATAAAGCATTCAATGAATCCGAATGACAGCACAGCAGTCCAAACTTGTAAGAATGATATCCTTCAACAAGCACTGAAGAACAGCGGACTGTCtagtaaagagaaaaacttAAACGCCACTGGTGCATCGAACTTGAAGAAAGTTGAGGCTGAGACTACTTTAGTGACTCTATTGGACAGAACTACTGATGGTTCCATGAGGAAGTATATCACAATTAAGCAACGGAGTATAGGAAGCATAAGATGGTACACGTGTTCCTATTGTCATAAAGAATTCAAGAAGCCATCTGATTTAATACGTCATTTACGTGTGCATACACAAGAAAAACCTTTTAAGtgttcGCATTGTTTTCGCTCATTTGCTTTAAAGTCCACGATGATGGCGCACGAACGTACTCATATGGGTGCAAAGAAGTATGAATGCAGCTCGTgcgataaattatttgcgTGTCATAGTAGTTTCACATCTCACGTCAGattGCACGCCAAGTCTCACAGATGCACTATCTGTGATAAATTCTTCACCTCGAGTGCAGTCTTGAGAGGTCATATGAAGATTCATACGCCAGAAAACTCCCAGATATCGGCCGAGGCGGAAGTTCTGGTGCCGCAAATCGTCCTGGAGGAACCGCTTATTATTAGCGATGCCGGAAATAAAATCAGCGTTGCTCAGGTTCaatcaaaacaaaaacaaatttataataatggcGATGTGGCAAGACCGCACAAGTGCTGGGTCTGTCCTGCGGCATTCAGAAAGATCAGTCACCTAAAGCAACACTATCGGAGGCATACAGGAGAACGACCGTACAAATGTCAAAAATGCGACAGgAGATTTACTTCGAACAGCGTATTGAAATCTCATTTACATACTCACGAAGACTCGAGACCTCATAGCTGCTCCATGTGTGGGGCAAAATTTTCCACACAAAGTAGCATGAAGAGACACTTGGTGACACATAGCAACAAAAGACCATTTATGTGCCCTTACTGCCACAAAACTTTTAAAACGTCCGTCAATTGCCGaaaacatatgaaaattcataaacacGAATTGGCACAACAgcaatTAGAGCAGCAGAGAACGCCGCAGACATCGCAGCTCCCTCTGATAGAGGACAAACGTGAAATTACCTGTTTGTCCGATAATCTTGAATTGACTAATCAGATGGAAGTAACGTTTCAGCCGCAAATTACGCCGGATTTTACTCAGGCATTTTCGGATCAGTTCCAAGGTATCGCTATGGACAAGGACAAAACATTCCTCTCGCAAAATGATACAGCGCAACCGATAGTCAGTGAAAGTTTATCTGAAGCGGACATGGTCCCTTTAGGATCGTCACAGACCTTGCATGCTGATGAAACTGGCACTATTACACTCCCTAACTATTCTGGCGATCAAACATTAACACCGgAAAGTATACGAGAAATTGAGGAAACATTAAATCAGCAGTTGTTTAATATAGGAATGAATTTAGGTTTAGAAAATAATCTAACGAGGCAGATTAACGAGCCCAGTGCGGTCTCTTTGGATATGAGGGAGCAAcctgtattaaatataatttacgagAATAACAAAGGCATAGAATCGTCAAGTTCTAGTGCAATTActggaaatatatttcccaCACAGTTCGATACCTTTGATATGAGTCATATTTCTTTGCAGGCTGACACCGAACTAGATATAGGAATTAGTTCAGCCAATTCAACAAGTATGGCTAGTATTCTGCCACGATCAGCACAAGAAGAACAACGTCTCGTACCAGCAAAGACAACAGTTAGCATTGAGGATGGACAAACAAAAGCATCCAGACACCTCATGGTTGTAAGTTCGACGCAATCTTGTCCAGAATTATCACGACCTGTTCAAGCTTGTCCAAAATACCCTAAAGTCATTGCAAAGGCTGACACGACGGATgaattggaaattcaaaatgttgataaagaagtaaaaaatcgagaggaaatgaaaatacttgaCAATCATGATGAAGAAATTTCGACGTTTACGTGTGACATATGCGATAAAATCTTCCATAAACAAAGTCAGCTAAAAACTCATATGAAGACTCATATATTACATGAGAGTGTCGATCAAAATAAAGATGACTTGGTAATAGTTAGCGAAACAGATTCCCTCTTGCAGTGTCATATGTGCAGTAAAAAGGGTTTCGCTGCAGCTGCATTGAAaGAACACCTAAAAACTCATCGGGGCACGAAGGAATTCCAGTGTACAGAATGTTCCTTAAGATTCTGCACCAACGGTGGACTGAGTAGACATCTAAAAATGCATGCAAGCAGACAacaaTGGAAATGTACGGTTTGTAGCAAAACATTTTCAAGCAAAATACATCTAAAGTCCCACCGGCAAATCCATGAAATCAGCTGGAATACGAATTCAGTAGAGCCTGATAGTTCGCAAAAAGAACCATTAGCCAGAAGCACGGATTTCCtgtcaaattttaatcttAACGTTACCACAGGAAACGATTCATCAGTTTCGCAAAAAGTCTTACTCGATACCGTAGCAGAAAAGGATATAATCGATCattcaaatGAACAAAgtgagaagaaagagaaacaggaGTATACAAACAAGTGTAAATTCTGTCCGAAAACATTTCGGAAACCAAGCGACCTAATAAGACATGTTCGTACGCATACGGGAGAACGACCGTATCAATGCGAATATTGTAACAAAAGTTTTGCAGTAAAATGTACATTGGACTGCCATCTGAAAGTGCATACagggaaaaaaacattttcgtgTCACGTATGCAACAGTTTATTTGCAACTAAGGGCAGCCTTAAGGTCCATATGCGACTCCACACagGTTCCAAGCCATTTAGGTGTATGCTGTGTGATCTACGATTCAGAACATCGGGACACAGAAAAGTTCATCTACTGACCCATATGAGGGAACACAAGGGCGGACCAAAGCGAAAACCAAAGCAATCGAAGTTCAGCACAATCGCAGGCGTCGCTGCAGAATTGGAGAAGACAGTAGAAAGTGAAATAAACGACGACACTACCATAATTAGTGAGGCTGCACAACCAACCGAGTACTCGAATCTCGATTCGATTACCATTGACACTGCAGAACTTACCGATCAAATTACGTTTAATGCCGACGGCACAATATTGAACAACAATTCCATGTTGTCAGTCAATGAAAGTAACCAATTGGTAGCCAATTTGCATTTCCTCCTTGCGAATGGTCTTGTAACTATTCAAACCGATGAGTCACTTTTACCGCATCTCCCAAACAGCGACACTCAGGTCGTCCAAACTGAATCTAGCATCAGTGAACTCGTCACGTCTGAAGCGCTGGAACACATAACCTGCAACGACACAAATTCTAACATCAGTATAACGACAGAACAGTGCGAAGACACTATTTCAGAGACTGTTTCCCGAACTGTTTCTGAGACTGTTCCTCAGAATTCATCCAAAGAAATTCCACAAGCCATTAGTGATGTTGTTGCTGAAACGAAAAAAGCAACGTTACAGAGTGTCCCTAAACAAGGAGCACAGAGTAGTCAGTCCCGCAAGGAGTGCGATATTTGTGGAAAGACATTTATGAAACCGTGTCAGGTGGAGAGACACAAACGAATTCATACCGGGGAGAGACCTTATAAGTGTAATTTGTGCACCAAGTCATTTGCCCAAAAAGCAACGTTGCAAATGCATCAGAAGCATCACACTGGAGACAGGCCCCATCCTTGTCCCCATTGCGACTACTCTTTTACACAGAAATGCAATTTGCAAACTCATCTCAAACGTGTTCACCAGCTGGACACCTTGGAGGTAAAAAAGTTACGACGCGGTCAACAGGTATTGAGTGCTAAGTCAATGCAAGATAATCTGGACGATACTCGAATACTCAGCTTGGATGATATTTCGTTTGTGGACTTCTTGAAGTAA
Protein Sequence: MLTQHTVVTESVASAIDTLPLGFIISDDGHTLLAVTERDDGAVEFMTVPVAFIHQNHTAVQSTLKGNNENSIFQISLDGDVTTGIQHSTFVPTQPSQPLPIITYEMQVSETEKKNGIETDVEQYSIPSSLNLENPISNKSQGNVGSESQIPIEKPVAKRSPGRPRKDETILSIKSNNLQCEICGQEFTRQMLYKKHIEHHAEEKPHRCPKCPASFNVPTNFTLHMATHNTGEPKCPECGRKFARMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDAHLKLHNEKWSTEDVRKCKLCNKQFTQPALYRLHIREHYRLQTKIVKHTKRGTKHKTMYKCKICLKSFQKPSQLMRHIRVHTGEKPFKCNVCSRAFTQKGSLQIHMWKHNGIRPHGCTLCSAKFSQKGNLNAHILRVHSVPEGEPIYRCTYCSCVFKKLGSLNGHMKRMHSNPVEDKSSCDNSTEADMQATVDTVISQLASLESGIKHSMNPNDSTAVQTCKNDILQQALKNSGLSSKEKNLNATGASNLKKVEAETTLVTLLDRTTDGSMRKYITIKQRSIGSIRWYTCSYCHKEFKKPSDLIRHLRVHTQEKPFKCSHCFRSFALKSTMMAHERTHMGAKKYECSSCDKLFACHSSFTSHVRLHAKSHRCTICDKFFTSSAVLRGHMKIHTPENSQISAEAEVLVPQIVLEEPLIISDAGNKISVAQVQSKQKQIYNNGDVARPHKCWVCPAAFRKISHLKQHYRRHTGERPYKCQKCDRRFTSNSVLKSHLHTHEDSRPHSCSMCGAKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTSVNCRKHMKIHKHELAQQQLEQQRTPQTSQLPLIEDKREITCLSDNLELTNQMEVTFQPQITPDFTQAFSDQFQGIAMDKDKTFLSQNDTAQPIVSESLSEADMVPLGSSQTLHADETGTITLPNYSGDQTLTPESIREIEETLNQQLFNIGMNLGLENNLTRQINEPSAVSLDMREQPVLNIIYENNKGIESSSSSAITGNIFPTQFDTFDMSHISLQADTELDIGISSANSTSMASILPRSAQEEQRLVPAKTTVSIEDGQTKASRHLMVVSSTQSCPELSRPVQACPKYPKVIAKADTTDELEIQNVDKEVKNREEMKILDNHDEEISTFTCDICDKIFHKQSQLKTHMKTHILHESVDQNKDDLVIVSETDSLLQCHMCSKKGFAAAALKEHLKTHRGTKEFQCTECSLRFCTNGGLSRHLKMHASRQQWKCTVCSKTFSSKIHLKSHRQIHEISWNTNSVEPDSSQKEPLARSTDFLSNFNLNVTTGNDSSVSQKVLLDTVAEKDIIDHSNEQSEKKEKQEYTNKCKFCPKTFRKPSDLIRHVRTHTGERPYQCEYCNKSFAVKCTLDCHLKVHTGKKTFSCHVCNSLFATKGSLKVHMRLHTGSKPFRCMLCDLRFRTSGHRKVHLLTHMREHKGGPKRKPKQSKFSTIAGVAAELEKTVESEINDDTTIISEAAQPTEYSNLDSITIDTAELTDQITFNADGTILNNNSMLSVNESNQLVANLHFLLANGLVTIQTDESLLPHLPNSDTQVVQTESSISELVTSEALEHITCNDTNSNISITTEQCEDTISETVSRTVSETVPQNSSKEIPQAISDVVAETKKATLQSVPKQGAQSSQSRKECDICGKTFMKPCQVERHKRIHTGERPYKCNLCTKSFAQKATLQMHQKHHTGDRPHPCPHCDYSFTQKCNLQTHLKRVHQLDTLEVKKLRRGQQVLSAKSMQDNLDDTRILSLDDISFVDFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01395274;
90% Identity: iTF_00293894;
80% Identity: -