Basic Information

Insect: Calameuta pallipes
Gene Symbol: lov
Assembly: GCA_030142375.1
Location: JARQSW010000565.1:1098992-1101431[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.5e-18 3.6e-15 55.6 0.0 1 44 500 543 500 544 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.5e-18	3.6e-15	55.6	0.0	1	44	500	543	500	544	0.96

Sequence Information

Coding Sequence: ATGTCGAGCGCCGCGGAGAGTCCTGACGGGATGGCTCTGCAGTCCCATTATTCCCTTAGATGGAACAACCACCAGGCCCATATTCTTCAGGCGTTTGAGGCCCTTCTTCACGCCGAGACCCTCGTCGACGTGACCCTCGTGTGCGCCGAGACCAGCATCAGAGCTCACAAGGTCGTTCTGAGCGCGTGCAGTCCCTTCTTCGAGAGGATATTCGCGGAGCATCCCTGCAAGCATCCGGTGATCGTGTTGAAGGACTTTCCCGGCCGGGAGGTAACAGCACTGATTGACTTCATGTATCGTGGCGAAGTGCGAGTAGGACGTGAAGAATTGCCAGGACTGATGCGAGCAGCCGAGAGTCTTCAGGTGCGAGGTTTGGCATCTTCGGAACCAAGGCCAGCGAGTCCACCGGAAACACCAACGGCGGATCTTCTACTTGGAGAACCGTCGACGCCGGAAGGCGCACGTCAAGGTACGCCAGAGGACGACGACGCGTCAGAAAGCGCGACAGTGCCACCTCCAGAACCTGGAGGCTTCTCCAGGGAACATCAACTAGCACGTGACAGGTTACCGCACATGGGCCAACTTAATTTCTCAGTGCGGGAACTGCGAGAGTCCTGCGGTTCGCCATTGATGCCCCGAAGAAAGCAAGCGAGACCGCGACGAAGATCCGGGGAGTTGGTACCTCAGGATTTGAGTAGACATCATCCCGCCCCGAGTCCAAGTCCTCCGAGTGGCGGTAGCGGcagtggtggcggcggcggcggcggcggtggcggacTGAACCTCACGAATCAACAGAGGGACCAGCCCGGCCAACAGGAGGACATGGCGGAGAATCTATCGATGAAAAGGTCGCTCTCTCCCTTACCGACGGAGCATAATATCAAGACGGAGAGCGAGAGTGCCAGCAGTCCTCGAGGATCGCCTCTAACAGGGACGTGTCTACAACCCGACGGTTCGTTGCAGGAGTTACCAGCAGCAGGCTTCCCAGGAGTCTCGGCCCTCTCCTTAACCCCACCCCATCACCACAGTGAGTACCTGACCAGTCTGGGACAACTGGCAGCTCAGTGGCTCCCGAATCACCCGCAGGGTCAATTGCCTCAAGGTCATCACCCACGGGAAGGGAGTCCGCACAATAGGTCCCATCCTTaccaacagcagcaacaagaCTCGCCTCTTACCCCAAGACGGTCGGTTGCAGTTTTTCCCATGGACGGGGTGGGCCACTTGGCTGGTGCCGGCAGTTTATTCCCACCAGGAAGCACACTCGATCGAAGCAGCTCCCTTTTGGCGGATCTCCATGATAGTTTCAAGCCGGAGAGCCTTCACGGCCTCTTTGGCACTGGTCTCGGACATCATCCCAGCAAAAAAGCGAAGAAGCACAGAGCCGAGAGTGCAGACGGTCCCCGAAGATGGTCTGAGCACAGTCGCGGGTTACCCGTTGGTCGACCTAAAGGTCAACACAGTGCACCTAGAGGAGGACCGCCCAGGTCATGGACCAATGCTGAACTCACCGAAGCACTTCAGCATGTTTGGAACAAGAAAATGACGACCTCACAAGCCAGCCGTATCTTTGGCATCCCCTACAACAGTTTGCTGATGTACGTGCGCGGAAAGTACGGCAAGAGTCTCAAGCTGGAGCAGTTACGCAGGGACTGCACAGGTGCCACCACCGGCGAGGTAGTGATGAATTCTTTGAACAACAACGTCAAGGCCGTCCAACCGCCCACCCAGATGTCACATCATCTGGCGGGTATTCCACATCCTGGTGACGACGCGGGATTCACACATCCCCTTCTGGGTGGTAATTTACCCCAGGGTTTCTTCCCAGACTTTAGTGCTGCCTTTCCGGTACCCGTTAGCATGGTGCATCTGCTGCCACCTAGCGAGCAAAAAGCCTTCGAACCACCACCCACATCAGGACCTGTATCCAGCGAACTCACCCCAAGGAGTAGGACGCCTTCACCATCGGCCGCGCACGATCCGCCACCTCAACCACCGACGCAGTCGGCCCCAGCGCTATTACAGCAAAATGGAAACGACTAG
Protein Sequence: MSSAAESPDGMALQSHYSLRWNNHQAHILQAFEALLHAETLVDVTLVCAETSIRAHKVVLSACSPFFERIFAEHPCKHPVIVLKDFPGREVTALIDFMYRGEVRVGREELPGLMRAAESLQVRGLASSEPRPASPPETPTADLLLGEPSTPEGARQGTPEDDDASESATVPPPEPGGFSREHQLARDRLPHMGQLNFSVRELRESCGSPLMPRRKQARPRRRSGELVPQDLSRHHPAPSPSPPSGGSGSGGGGGGGGGGLNLTNQQRDQPGQQEDMAENLSMKRSLSPLPTEHNIKTESESASSPRGSPLTGTCLQPDGSLQELPAAGFPGVSALSLTPPHHHSEYLTSLGQLAAQWLPNHPQGQLPQGHHPREGSPHNRSHPYQQQQQDSPLTPRRSVAVFPMDGVGHLAGAGSLFPPGSTLDRSSSLLADLHDSFKPESLHGLFGTGLGHHPSKKAKKHRAESADGPRRWSEHSRGLPVGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRRDCTGATTGEVVMNSLNNNVKAVQPPTQMSHHLAGIPHPGDDAGFTHPLLGGNLPQGFFPDFSAAFPVPVSMVHLLPPSEQKAFEPPPTSGPVSSELTPRSRTPSPSAAHDPPPQPPTQSAPALLQQNGND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01474063;
90% Identity: iTF_00296927;
80% Identity: iTF_00254461;