Basic Information

Insect: Calameuta idolon
Gene Symbol: RREB1_1
Assembly: GCA_030142285.1
Location: JARQSV010000368.1:784639-790031[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00082 0.059 13.9 0.0 1 23 39 61 39 61 0.98

2 16 0.00018 0.013 16.0 0.3 1 23 75 97 75 97 0.98

3 16 2.4e-07 1.8e-05 25.0 1.3 1 23 103 126 103 126 0.98

4 16 0.11 7.8 7.2 0.2 1 23 219 243 219 243 0.92

5 16 0.074 5.4 7.8 5.4 2 23 249 271 249 271 0.95

6 16 1 73 4.2 0.3 1 19 327 345 327 347 0.94

7 16 0.2 15 6.4 0.1 1 23 461 483 461 483 0.96

8 16 1.7e-05 0.0013 19.2 0.3 1 23 492 514 492 514 0.98

9 16 0.0013 0.095 13.3 2.8 1 23 520 543 520 543 0.97

10 16 0.00048 0.035 14.6 3.0 1 23 929 952 929 952 0.97

11 16 0.0007 0.05 14.1 0.1 3 23 1224 1244 1222 1244 0.97

12 16 0.62 45 4.9 6.0 1 23 1250 1273 1250 1273 0.97

13 16 0.0044 0.32 11.6 2.2 1 23 1311 1335 1311 1335 0.97

14 16 5.8 4.2e+02 1.8 2.5 1 23 1421 1444 1421 1444 0.86

15 16 0.012 0.86 10.3 0.4 2 23 1495 1516 1494 1516 0.94

16 16 1.4 1e+02 3.7 8.2 1 23 1522 1544 1522 1544 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00082	0.059	13.9	0.0	1	23	39	61	39	61	0.98
2	16	0.00018	0.013	16.0	0.3	1	23	75	97	75	97	0.98
3	16	2.4e-07	1.8e-05	25.0	1.3	1	23	103	126	103	126	0.98
4	16	0.11	7.8	7.2	0.2	1	23	219	243	219	243	0.92
5	16	0.074	5.4	7.8	5.4	2	23	249	271	249	271	0.95
6	16	1	73	4.2	0.3	1	19	327	345	327	347	0.94
7	16	0.2	15	6.4	0.1	1	23	461	483	461	483	0.96
8	16	1.7e-05	0.0013	19.2	0.3	1	23	492	514	492	514	0.98
9	16	0.0013	0.095	13.3	2.8	1	23	520	543	520	543	0.97
10	16	0.00048	0.035	14.6	3.0	1	23	929	952	929	952	0.97
11	16	0.0007	0.05	14.1	0.1	3	23	1224	1244	1222	1244	0.97
12	16	0.62	45	4.9	6.0	1	23	1250	1273	1250	1273	0.97
13	16	0.0044	0.32	11.6	2.2	1	23	1311	1335	1311	1335	0.97
14	16	5.8	4.2e+02	1.8	2.5	1	23	1421	1444	1421	1444	0.86
15	16	0.012	0.86	10.3	0.4	2	23	1495	1516	1494	1516	0.94
16	16	1.4	1e+02	3.7	8.2	1	23	1522	1544	1522	1544	0.98

Sequence Information

Coding Sequence: ATGTGCGGTTTTGTGATTACAGTGACCGCTGACAGTGGACCGGATCAGCGACAGACCAGCGAGACTCAGACGGATGCTGGATCTTCGCCATTGGTCGAGCATCCGGAGGGAACGTATCCTTGTCCTGCATGCCCTACAGTACTCTCAAGCTCCAGGGAACTAACGAATCATCTACGTGGTCACAATTCGCCACGCAGTACGGATTGCAGCGGCGAGGAGGACTATTCCTGTGGGGTCTGTCACAAGGTTCTTAGCTCTGCCAGTTCTCTCGATCGGCACGTGCTCGTTCACTCGGGCGAAAGACCGTTCAAGTGCAAATACTGCGACATGGCCTTTACCACCAATGGAAATATGAACAGACACCTCAGGACGGCACATCGTGCGCTCTCGCCTCACAGTTGCACGGATTCCGATGGGAGCAGCGATTCGGAAAAGCCTGTCAAGAGACGTTGCATCGAAGAGTACAATAATAACGAGATTGCCAAACGCAATTCTCCGGATCTCATTGAGAAACATAAATCTCCCAGCATGACTATCAACAAGAGGAAGTCGTTGGATTCTACGGATGAGGTTGAGTCACTGCGCAAGCACAAGATACTCCTGAACAGTTCCAGAACTGAGACAAAGAGCAACGTATACGAGGACACGGCTGTTCACAATTGTCAAGTGTGCGGGAAACAGGATTTCGCCACTGCTGGTCTTCTGGAGGCTCATCTCGAGCGTAACCATCCTGAGGTGTTAGCGAAATGCGATATGTGCGATCTATCGTTCAAGAATCATCGCGTGCTCAATCATCATCGGTTCATGAcacattttaatgaaaattcgattaacaATAGTTCACGGAACCTTAGGAATTCTGTGGTAGGCTTTGATGATTTGACATTCGTCGATTTCTCGGCTGACAAATTCCCGGCAATCGCCAGGGCCGTTTGTGAACAGTCTGTTCATAGACCAGCTTCCGGGGAAGTCACTAGGTTCCAATGCGCCAAGTGTCTCAGGGCCTTCCCTTGCAGATCAGCCCTGGAGGCGCATGAGTCTGACTGTGGGATACCCAATTCTCAAAGCAGAACCCATGGCGAGGATCAGTCCAGGAGGGACAACTTCTTTGCTGGTCTTGATCTTCAGAATAAGGCTGCTCTCGCTGAGGCCAAGGAAGGCAAGGATCTGGCTGACATACAGAGCATCATTTCCATGACCTCTGGACCCATTCTTCAGAACTTTCCTAGGTCCGATGCCAGCACACCGGATAACAGTATAAAAATCAATCCTAACCTTGGATCATCCGGTTCGTCCGGCACACCCTCCTCCGAGTATCACGAGGAAGAAGCACAGGACGCCTTCGCGGCTGAGTTCAGGAAGATGAAACTCAAAGGAGAATTTCCATGCAGACTTTGCACCGCAATATTTCCAAATCTTCGAGCTCTCAAGGGTCATAACCGCGCGCATATGAATGTCGGTCCAGGTATGCCCTATCCATGTAACATGTGCCCGTACACGAGCACCGATAAGGCTACCCTTATCAGACATTTAAGGTCGCACAATGGCGATAGACCCTACGAATGCTCTCTGTGTAATTACGCTTTCACGACCAAGGCCAACTGTGAAAGACATGTTCGCAATCGTCATGGTAAACTCACCCGTGAGGACATTAAGAGCGTTCTGATATATCATCCCAACGAAGACTCCACAAACGACACCGTCGACCGTACATCTCCCAGAGCCATTTCTAGGGAGGATGCTCGCAAAACTCTAGTCTATCACAGCGAACGTGATGAAGGCATCCATCAGCATCATCATTACTCTACGTTATCCATGTCCACTGAGCCCAAGTCTGAAATCCGAGTGATCGAGGAGGCGAAGCTTCGTCAGCCGGGAATGCCCTCACTCTTTGCCGTGAATCATTACGAAAATTCGGAATTCTTCTCCAGGCCAACGAGTATCCAATCCATGGAGCTCGGAAGGCATTCCGAGGAGCCGGAGAAGGGTCAGGAACTGTTAGGAAAGCACAGTTACTCCAaggacgatgatgacgatcAAGACACCAGGTCGTCGGATGAAAGCGTGTCTCTAGTCAGCGAAACCAAATCCGAGCTGCACCAAAGAAATCAGGATGGTCCTATCGACTTGAAAAAGACTATCGGAGACTCCGGAAACGTGGTCGATTCCGGAGTCGAAGAAGCTCCCCTTGATCTCTCCATGGATGCACTTGATCTCAGAAAAAGATCCAGGAGCAACGAAACCGACCAGCCTAGCTCGTCCGAAGACTACTCCAGGAATCCCAAGGACTTCTATAATGCTACGAATCAACTTTTATTGACGCAGGCTCTCCTCAAAGCCGGACAGGCAGGGACTCAGCCTAACTCCTTGGAAGCTCTGTATGCAAACGCTCATCTGATTTATCGAAACTTTGGCACATTCCCACCGGGCACTGGCCTTATACCCCCTTATCTCCTCAACCCGCATTTGTTTGGCCATGATTTTGCCATGAAGGACAGAATCCAGAAGGAACTGGTACGAGGCCTGCAGCTCACCAGTGGCGGAACTCTCGTCGAACCCTCCGGATTTGTCTCAAACTTCCCTCAAGGACGGGAATTATCAGCGCATACAGCTACTGACCAAACTGATTACTCCAAACTGATTTCATCCCAACTGAATAACAAGGTATCGGTACCGCGTGAGAAGTTAGAAAATTCTCCCAGCTCGAATTCTGTCAAAATGGTGATAAAGAATGGAGTCCTCATGCCAAAACAAAAGCAAAGGCGATACAGAACCGAGCGACCGTTCACCTGCGAACACTGTTCGGCCAGGTTCACCCTCAGGAGTAACATGGAAAGACACATCAAGCAACAGCATCCTCAGCACTGGAGCCAAAGACCACGAGGTGGTCATTCCACAAGAGGTCGACCTCCAGCGAATCCTCCCACCTTGTTGCAGAATCTTGGACAATCCAGCATGTCCCAGCAGGTACAACAGCAATATCAAAACATATTACCAAAGATGGGACAGAATGTGAATTCTGAGTACGGGAAGCACGCTATTTCCGATCAAGTGAAATACGCTATACTGGCACAACAGTTGAAAGGTAACAGAGTAGAGGAAAATGACACCGACGAGGAGCTGATAATCGACGAAGGTCCAACCGGAAGAGAAACACCGGATACCCATCGTGAGAACGAACAGCAGCATACCAGTCTGCTCAGAGATCAGTCGCAGAACAACGAAGAAGACGACGAGCACGATGCCAAGGGCAAAATAAAGTCTGAAATAAACGAGTCCAAGCCGGAAGTTGAGACTAATGTGGACGACGATGACCTAATATCAGAGAACAGTCTAGTGAAGTCAGAGATGCCGGACGACATGGGAAAGAGAAGCGAATCGTCCCGAGAGGACGAAAACGAAAGAACCGAAGATGGCGCTGTTGATCTTGCTAGTGTTTCCAAGTTGCTGGACAATGCTTCCCAACAATATCAACAGTTTCAGCCTCAGTATCTTAGCGACGAGGAAGGTCTCGTTGCCTCTACCAGCGACTGTAACAATTCGGGTAGCGACGAGAAATCCGATTCCGGAAATTCAGTAAATTCCGGCACATCGAGCTcctccaagaagaagaagaaaaagaagaagaagaagaaatctgCATACTCGATGGCGCCGAACAGAGTGATCTGTCCTTACTGCGAGAGGCCGTTCCCATGGACGTCGTCCCTGAGGAGACACATTCTCACTCACACTGGACAAAAGCCCTATCAGTGTGTACACTGCTCCCTTCTATTCACGACAAAGTCAAACTGCGATCGTCATCTTTTACGAAAGCACAAGACCAATCCACATAAGATTCGTCGAGCAAGAAACTCCTCGTCCCCGGAAGCGACAAATATTCCAGCAAACAGCAATAGCTTCTCAATGAGAAACGTCCCGGAGAGACCCTACAAGTGTAACCAGTGTCCAAGCTCCACCTTCTCCACTTTGGGTAACTTGAAGAAGCATCGATCCACCAAGCatctagataaaaaaaataaatccagatGCAACACCCCGTTGAGCGAATCCCAAAACAGTCCGCATAGTTCAGGGAAGCATAACGATCAGAGTGGATACGAGAGTCAGTCCTCAAGTATTTCTGAAAACATGCAAAGTTCCCCACAGAACGTTCCCGTTATTAAATTGACAGCCAGTACAACCTCCTCCTCGATCAACGACGCGTCTCGTTCGCGAAAAACATCTCCAAGATCCTCACCAGGACCTGCCGAAGCGCCTTTCAAGTGTCACCTGTGCGATAGCGGCTTCGCAGAGCGTCAAGATTGCCTTGAACACATCAAGGACAACCACAAGAGGTCCTACGAGATGTTGGTGGCCAAGGGTGCGCTGGACATGGACATAGAAGTAGCAGAGGATCAGCAACAACCTCTGGTGCATCAGCACGCGAGCGACGGCGAAGAGAAACGTGGCAAATTTCCTGACTACAGTAATAGAAAGGTAGTTTGCGCGTTCTGCATGCGCAGATTTTGGTCTGCAGAGGATCTTCGTCGTCACATGAGAACTCATACCGGGGAGAGGCCATTTTCCTGCGACATTTGCTGTCGCCGCTTCACTCTGAAACACAGCATGCTGAGACACAGGAAGAAGCACGAATCCGTCGACTCTCCCATGTACGTGGGTACGAGTGGAGATGAAGAATCCGTAGCGAGTCAACCACCCACGATCACACCGAGAAGTCAGCAGCATCCAGCGCTCGTAATGTCATCCAGCAGTGATAACAGATTGCGAGAGCGTGTATCTCTGCCCACTGTGGAGACGGTGGCCACAGCAGACGCTGCTCCTAGTGGTCTGATGAGGTACAACGCGTACGAGAACCTGACTACTCTGACTGGGCAGCTGACTACTGTTCAACAAAGTGGAAATCTTGATGTTCCTGAAAATTCAGAGAATGATCTTATCTCGAATCTCCTTGGTATTCGCGATAAGAGCATTATAGACAGAGTGCTTCAGGCATCAGCTGACGACGCGGCCAAATTGCTCGGAGTCAAGAGAAACTAA
Protein Sequence: MCGFVITVTADSGPDQRQTSETQTDAGSSPLVEHPEGTYPCPACPTVLSSSRELTNHLRGHNSPRSTDCSGEEDYSCGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHRALSPHSCTDSDGSSDSEKPVKRRCIEEYNNNEIAKRNSPDLIEKHKSPSMTINKRKSLDSTDEVESLRKHKILLNSSRTETKSNVYEDTAVHNCQVCGKQDFATAGLLEAHLERNHPEVLAKCDMCDLSFKNHRVLNHHRFMTHFNENSINNSSRNLRNSVVGFDDLTFVDFSADKFPAIARAVCEQSVHRPASGEVTRFQCAKCLRAFPCRSALEAHESDCGIPNSQSRTHGEDQSRRDNFFAGLDLQNKAALAEAKEGKDLADIQSIISMTSGPILQNFPRSDASTPDNSIKINPNLGSSGSSGTPSSEYHEEEAQDAFAAEFRKMKLKGEFPCRLCTAIFPNLRALKGHNRAHMNVGPGMPYPCNMCPYTSTDKATLIRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLTREDIKSVLIYHPNEDSTNDTVDRTSPRAISREDARKTLVYHSERDEGIHQHHHYSTLSMSTEPKSEIRVIEEAKLRQPGMPSLFAVNHYENSEFFSRPTSIQSMELGRHSEEPEKGQELLGKHSYSKDDDDDQDTRSSDESVSLVSETKSELHQRNQDGPIDLKKTIGDSGNVVDSGVEEAPLDLSMDALDLRKRSRSNETDQPSSSEDYSRNPKDFYNATNQLLLTQALLKAGQAGTQPNSLEALYANAHLIYRNFGTFPPGTGLIPPYLLNPHLFGHDFAMKDRIQKELVRGLQLTSGGTLVEPSGFVSNFPQGRELSAHTATDQTDYSKLISSQLNNKVSVPREKLENSPSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPANPPTLLQNLGQSSMSQQVQQQYQNILPKMGQNVNSEYGKHAISDQVKYAILAQQLKGNRVEENDTDEELIIDEGPTGRETPDTHRENEQQHTSLLRDQSQNNEEDDEHDAKGKIKSEINESKPEVETNVDDDDLISENSLVKSEMPDDMGKRSESSREDENERTEDGAVDLASVSKLLDNASQQYQQFQPQYLSDEEGLVASTSDCNNSGSDEKSDSGNSVNSGTSSSSKKKKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCVHCSLLFTTKSNCDRHLLRKHKTNPHKIRRARNSSSPEATNIPANSNSFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHLDKKNKSRCNTPLSESQNSPHSSGKHNDQSGYESQSSSISENMQSSPQNVPVIKLTASTTSSSINDASRSRKTSPRSSPGPAEAPFKCHLCDSGFAERQDCLEHIKDNHKRSYEMLVAKGALDMDIEVAEDQQQPLVHQHASDGEEKRGKFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESVDSPMYVGTSGDEESVASQPPTITPRSQQHPALVMSSSSDNRLRERVSLPTVETVATADAAPSGLMRYNAYENLTTLTGQLTTVQQSGNLDVPENSENDLISNLLGIRDKSIIDRVLQASADDAAKLLGVKRN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01474941;
90% Identity: iTF_01474941;
80% Identity: -