Basic Information

Insect: Calameuta idolon
Gene Symbol: -
Assembly: GCA_030142285.1
Location: JARQSV010000400.1:1421535-1425359[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.047 3.4 8.4 3.1 1 23 391 413 391 413 0.93

2 21 0.0055 0.4 11.3 0.2 1 20 421 440 421 441 0.96

3 21 0.003 0.22 12.1 0.3 1 23 450 472 450 472 0.98

4 21 2.4 1.8e+02 3.0 0.2 2 23 499 520 498 520 0.86

5 21 0.045 3.2 8.4 0.8 1 23 528 551 528 551 0.92

6 21 0.00027 0.019 15.5 0.9 1 23 557 581 557 581 0.92

7 21 1.5 1.1e+02 3.7 0.2 2 23 614 635 613 635 0.91

8 21 0.14 9.8 6.9 0.6 2 23 644 666 643 666 0.93

9 21 0.00077 0.056 14.0 2.2 1 22 672 693 672 696 0.91

10 21 0.0003 0.021 15.3 6.5 1 23 780 802 780 802 0.98

11 21 0.0033 0.24 12.0 0.2 1 23 809 832 809 832 0.95

12 21 9.7e-05 0.007 16.8 2.1 1 23 838 860 838 860 0.98

13 21 0.00066 0.048 14.2 2.1 1 23 866 888 866 888 0.97

14 21 6.7e-05 0.0049 17.3 1.0 1 23 894 916 894 916 0.97

15 21 0.1 7.4 7.3 0.6 1 23 929 952 929 952 0.96

16 21 0.00016 0.011 16.2 4.1 1 23 968 991 968 991 0.96

17 21 0.0011 0.08 13.5 1.3 1 23 999 1022 999 1022 0.96

18 21 5.5e-05 0.004 17.6 1.6 1 23 1028 1050 1028 1050 0.98

19 21 0.011 0.79 10.4 6.9 1 23 1056 1078 1056 1078 0.98

20 21 0.00012 0.0087 16.5 3.1 1 23 1084 1107 1084 1107 0.98

21 21 0.075 5.4 7.7 5.4 1 23 1113 1135 1113 1135 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.047	3.4	8.4	3.1	1	23	391	413	391	413	0.93
2	21	0.0055	0.4	11.3	0.2	1	20	421	440	421	441	0.96
3	21	0.003	0.22	12.1	0.3	1	23	450	472	450	472	0.98
4	21	2.4	1.8e+02	3.0	0.2	2	23	499	520	498	520	0.86
5	21	0.045	3.2	8.4	0.8	1	23	528	551	528	551	0.92
6	21	0.00027	0.019	15.5	0.9	1	23	557	581	557	581	0.92
7	21	1.5	1.1e+02	3.7	0.2	2	23	614	635	613	635	0.91
8	21	0.14	9.8	6.9	0.6	2	23	644	666	643	666	0.93
9	21	0.00077	0.056	14.0	2.2	1	22	672	693	672	696	0.91
10	21	0.0003	0.021	15.3	6.5	1	23	780	802	780	802	0.98
11	21	0.0033	0.24	12.0	0.2	1	23	809	832	809	832	0.95
12	21	9.7e-05	0.007	16.8	2.1	1	23	838	860	838	860	0.98
13	21	0.00066	0.048	14.2	2.1	1	23	866	888	866	888	0.97
14	21	6.7e-05	0.0049	17.3	1.0	1	23	894	916	894	916	0.97
15	21	0.1	7.4	7.3	0.6	1	23	929	952	929	952	0.96
16	21	0.00016	0.011	16.2	4.1	1	23	968	991	968	991	0.96
17	21	0.0011	0.08	13.5	1.3	1	23	999	1022	999	1022	0.96
18	21	5.5e-05	0.004	17.6	1.6	1	23	1028	1050	1028	1050	0.98
19	21	0.011	0.79	10.4	6.9	1	23	1056	1078	1056	1078	0.98
20	21	0.00012	0.0087	16.5	3.1	1	23	1084	1107	1084	1107	0.98
21	21	0.075	5.4	7.7	5.4	1	23	1113	1135	1113	1135	0.97

Sequence Information

Coding Sequence: ATGAATTCTCCAAAAACGTTCATTGTGAAGGTAGAGAACTCACATATTACATTATCAGTAACAGACACATTTAAAGACCTGCAGATGAAGTTGAAAGAACATGGGATAGATGTAAACATAGCATCGATGctaattaaaggaaaaatggTAAATGAGTCTTCTGTTGTATCAGAGTGCCTTAGTGTggaaagTAAGGATGTAGAGGATGAGACTGTAGAATTTGTATTACCAGATTTATCTGAAATCTCAGAAACAGAAATGATTTCTGATCAAGatattGCGACTCAAAAGATTAAGTATTCATTGTGTCGATTATGTGGTATGATGACAGAAGACCCAGTTGATATTTTTGAGGAATCAAATATTACAGaaacaataaacaaattattatcaatatctATATGTCGACAAGAAACATTATCACGATACATATGCAGCCCATgccataagaaaattattttcattcaggattttgttttactttgtatagaaaatgaaaaaagattgTCAAATCTAACTACTTCATCAAACCAATCCATTGAAATTCCAGTGAATGACAATACAAAAGTTGagaaattattgcaaatacatgacaaaacaaataaatacagatGTCCCAATTGCAAAGTAAATCTAATCATCTCCAGAGATGTTCAATCGGAAAATTTTGATAGTGCCTTTCAAATAACTTTAAATTCAACAGATAGTACAGATGAATCTGAAATAAATGCAGagttaaagaaacaaaaaacggATGTCGTATCACGGAAAGGAATAAGTACCAGATCGGTAAGAAATTTACGATCATCTTccaatttacttaaaaaaggTAATACAGTTAGTGCAAGACATACGAGAAGGCAAACACAAAATATATCTAGACCTACAGAGAGCCacgcaaaaaatataaataacgctttaaataaaaaatcttctcGAGAAAAGAGTAAAACTAATTTGCGAGATATCAAAAAGAGAATAACGAATAGCGATCATGACAATGGAAAACACACACAGTCAccaaagaggagaaaaatggTTTCTAAGACCacagaaaatacttttcttacAATTGATCCGAATTTGAATGATTCTAATACTACTGGTGAATTCGTTGAATTTGATACTCTTGAGGAAAGTAATGACGAGAATATAAAAAGGCCAATGAAACATAAATGCGATATATGtgatttagaattttcttcggAAGATCATTATCGGTTTCATGTGGATCGACACGAGACGGGAtgtttctataattttaaatgcacTACATGTAAGAAAGAATTATCCTCTGAGGATAGCTTATGGGAACATCAAGAATGCTGTGAGATAAATCTTGAATACTATAGTTGTACGTTATGCCAGGAAACGTTccttgaaaaagaattattaaatgatcaTATGCAAATTCACGatcaagaagatgaaaaatctCTTAATACAGATACGGATACAGTTCAAtcagaaaatggaaaaaaatcaactaaaTTAACGTGTGAAGAATGTGGAGCGCGCTATGTATTACGGGAACGATATGAATTTCACATACAAAGGCATAATTTTGGAAACATCAAGACTTTTTCATGTCtaatttgtgaaaaaagatttaagaGTGAAAACATTTTGTGGGATCATTACCAATATCAACATAGAGCAGGCGAGAAATTCGCTTGTTTAACTTGTGAGAAAACATTTGTCAAGCGagcaaatttgaattatcacTTAAAAACATTTGGCCACAAGGGTGGAAAATTCGTGAACAGCATAGAACATAATCAAAGCACCGACTCCAGTAACATGAAACTGTCTGATGTTGGTAAACCACGACCTAAAATAACTTGTTTAGAATGCGGAGCTCGTTTTGTTTTACAAGAAAGATATGAATTCCACATGGAAAGACATAAATCTGGAAAAATGGATGTTTGCGTGTGCAATCTGTGCGGTAGAGAATcgacaaatgaaaatgttttgtgGGATCATTATCAGTATATGCACAAACGCACGAAACGTTACGTTTGTACTACAtgtggaaaattatttcacaaacAGTCAATGTTGAGTAGACATCAAGTCAAATATGGTCACAAAGGTACAAAAGAAATAGATATCGAAACGGATGACAATGCTATAACAATAGACAGTGCTGCTTTTAAAAAGGTTATAGCTGAAGAgataatagaaatgaaatcaGTGAATTGCGTACTCTGTGGAGAAGTAGTATGGGGTGTGGACCCAAATTTGATAAACGATGCTGTTACCTGTTCGAATTGTGAGAGACCTGGACTGTCTTTGCAAGTAGATTCGGACGGTGCTAAGGTAATATCACGTCGTCAGTATCATTGCAACATGTGTAACAAACATTTCACAACAAAAGATCGCCTAGAGTATCACATAATGCGCCACTCGGAAAATATGGACGAATTTGTTTGTAGTACTTGTGGAAAGGAACTCAGTACCGAGCAAGCTTTGTTTGAGCATTACTTATACGTGCACAAAGGCGCAAGACCACACGTTTGCGAGCTTTGTGGAAAATCTTATCAATTCAAGGCTCGGTTAAAGGAGCATATGAGAAGTCATAGTGGAGAACGACCATTCGCCTGTGAAATATGTGGTCAACGATGTATGACGAATAATGCGTTACGGTCTCACAAAAAAACTCATATCACAGAGAAGCGATTTCCATGTCAATTATGTAAGAAGGCATTCAGAAAAAGGCAGGATTTGAACGAACACTTGGAGAGACACTGGAAGAATGACAAGACGATGACATTACCACAAGTGTTTAGTTGTTCTATATGCATGGAGATGTTTCCGACTTTTCGGATTCTAAAAAAGCACATGAAAGAGATTCACAGTGTGGAGAGTCAGGATCCTATATTGACTGAATTGCAACCATGGTTTGAGTGCGAAGACTGTCACGAGAAGTTCAAGCATCAAATGTCTTTGAAGGTTCATCGTGAGAAGGTTCACGAGGGTAAAATGAAACCCGTTTATCATTGCGACATATGTGATATCACATATAAGAATGCACGGGTACTCTCGAATCACATTAAGAATAAACACGAGGGTGGTAAACGGTATAAATGCGCTCAATGCGGTAAAGAGTACAATCAGTCTACGTCTTTAcataatcatattttattgcatACGGGAGAAAAGCCGTTCAATTGTGAACATTGCGAAATGACGTTTCGCACTAAGGAATCCCGCGATCATCATCAACGAAAACATACTGGAGAGCGTCCTTATAAATGTCCACATTGTGACAAAGCATTCGCTACTACAACTCAACGTCGAGAGCATCGAAAACGAGAACACGATGAAGGCAATAATCATCATTGTCCAGAATGTGGGAAAGTATGTTTTGGTGAGCATGGCGTTAGAAGTCATTTAAATACTCATATGGCTGAGAAACAGCAGTCACAGAATGATATTACGTaa
Protein Sequence: MNSPKTFIVKVENSHITLSVTDTFKDLQMKLKEHGIDVNIASMLIKGKMVNESSVVSECLSVESKDVEDETVEFVLPDLSEISETEMISDQDIATQKIKYSLCRLCGMMTEDPVDIFEESNITETINKLLSISICRQETLSRYICSPCHKKIIFIQDFVLLCIENEKRLSNLTTSSNQSIEIPVNDNTKVEKLLQIHDKTNKYRCPNCKVNLIISRDVQSENFDSAFQITLNSTDSTDESEINAELKKQKTDVVSRKGISTRSVRNLRSSSNLLKKGNTVSARHTRRQTQNISRPTESHAKNINNALNKKSSREKSKTNLRDIKKRITNSDHDNGKHTQSPKRRKMVSKTTENTFLTIDPNLNDSNTTGEFVEFDTLEESNDENIKRPMKHKCDICDLEFSSEDHYRFHVDRHETGCFYNFKCTTCKKELSSEDSLWEHQECCEINLEYYSCTLCQETFLEKELLNDHMQIHDQEDEKSLNTDTDTVQSENGKKSTKLTCEECGARYVLRERYEFHIQRHNFGNIKTFSCLICEKRFKSENILWDHYQYQHRAGEKFACLTCEKTFVKRANLNYHLKTFGHKGGKFVNSIEHNQSTDSSNMKLSDVGKPRPKITCLECGARFVLQERYEFHMERHKSGKMDVCVCNLCGRESTNENVLWDHYQYMHKRTKRYVCTTCGKLFHKQSMLSRHQVKYGHKGTKEIDIETDDNAITIDSAAFKKVIAEEIIEMKSVNCVLCGEVVWGVDPNLINDAVTCSNCERPGLSLQVDSDGAKVISRRQYHCNMCNKHFTTKDRLEYHIMRHSENMDEFVCSTCGKELSTEQALFEHYLYVHKGARPHVCELCGKSYQFKARLKEHMRSHSGERPFACEICGQRCMTNNALRSHKKTHITEKRFPCQLCKKAFRKRQDLNEHLERHWKNDKTMTLPQVFSCSICMEMFPTFRILKKHMKEIHSVESQDPILTELQPWFECEDCHEKFKHQMSLKVHREKVHEGKMKPVYHCDICDITYKNARVLSNHIKNKHEGGKRYKCAQCGKEYNQSTSLHNHILLHTGEKPFNCEHCEMTFRTKESRDHHQRKHTGERPYKCPHCDKAFATTTQRREHRKREHDEGNNHHCPECGKVCFGEHGVRSHLNTHMAEKQQSQNDIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00293924;
90% Identity: iTF_00293924;
80% Identity: -