Cido008364.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Calameuta idolon
Gene Symbol
ZNF236
Assembly
GCA_030142285.1
Location
JARQSV010000455.1:1050-20821[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 9e-05 0.0065 16.9 1.4 2 23 179 200 178 200 0.96
2 28 4.4e-05 0.0032 17.9 0.6 1 23 206 228 206 228 0.98
3 28 8.7e-06 0.00063 20.1 0.3 2 23 234 255 234 255 0.97
4 28 0.0088 0.64 10.7 0.2 3 23 263 283 261 283 0.96
5 28 8.5e-05 0.0062 17.0 1.0 2 23 294 315 294 315 0.98
6 28 7.7e-07 5.6e-05 23.4 1.3 1 23 336 358 336 358 0.99
7 28 2.7e-05 0.002 18.6 0.7 1 20 364 383 364 386 0.94
8 28 0.00025 0.018 15.5 0.2 3 23 394 415 393 415 0.97
9 28 0.00052 0.038 14.5 3.7 1 23 424 447 424 447 0.98
10 28 3e-07 2.2e-05 24.7 2.8 1 23 565 587 565 587 0.99
11 28 0.00062 0.045 14.3 3.8 1 23 593 615 593 615 0.99
12 28 0.034 2.5 8.8 4.0 1 23 621 643 621 643 0.99
13 28 1.9e-05 0.0014 19.0 3.4 1 23 647 669 647 669 0.98
14 28 0.00041 0.03 14.9 3.6 1 23 724 746 724 746 0.98
15 28 5.4e-05 0.0039 17.6 5.0 1 23 752 774 752 774 0.99
16 28 3.8e-05 0.0028 18.1 2.4 1 23 780 802 780 802 0.97
17 28 0.00013 0.0091 16.5 7.2 1 23 808 830 808 830 0.98
18 28 5.3e-07 3.9e-05 23.9 3.0 1 23 1152 1174 1152 1174 0.99
19 28 0.066 4.8 7.9 0.8 2 23 1198 1219 1197 1219 0.97
20 28 9.6e-05 0.007 16.8 2.9 1 23 1225 1247 1225 1247 0.99
21 28 1.3e-05 0.00092 19.6 3.5 2 23 1254 1275 1253 1275 0.97
22 28 6.5e-07 4.7e-05 23.7 1.6 2 23 1349 1370 1348 1370 0.98
23 28 0.039 2.8 8.6 5.2 1 23 1376 1398 1376 1398 0.96
24 28 0.00016 0.012 16.1 1.6 1 23 1404 1426 1404 1426 0.98
25 28 0.0019 0.14 12.8 2.9 1 23 1432 1454 1432 1454 0.98
26 28 0.00029 0.021 15.3 1.9 2 23 1668 1689 1667 1689 0.97
27 28 3e-05 0.0021 18.4 4.0 1 23 1695 1717 1695 1717 0.98
28 28 2.1e-05 0.0015 18.9 6.6 1 23 1723 1746 1723 1746 0.96

Sequence Information

Coding Sequence
ATGTTGACGCAGCACACTGTTGTCACAGAGTCTGTGGCCTCTGCTATTGACACACTACCTTtgggatttattatttctgacGATGGACATACACTATTAGCAGTAACTGAAAGAGATGACGGTGCTGTTGAATTCATGACAGTCCCAGTGGCTTTTATACATCAGAACCATACTGCAGTACAATCTACACTgaaaggaaataatgaaaattcaatttttcaaattagttTGGATGGTGATGTTACTACAGGAATCCAGCATTCTACACTTGTACCTACACAGCCTTGTCAACCAATACCTATTATTACAAGTGAGATACAAGTATCtcaagctgaaaaaaaaaatgaaatagaaactGACATAGAACAATATGGTATTCCAAGTTCATTGGATTTGGAAAATCCAATTCCAAATAAGGCACAAGGAAATGTTGGATCCGAATCTCAAACTTCTATTGAAAAACCAGTTACAAAGAGAAGTCCTGGTCGGCCAAGAAAAGATGAGACTACACTTTCTATTaaatCAAATAACTTGCAATGTGAAATTTGTGGTCAAGAATTTACTCGGCAAATGTTGtataaaaaacatattgaaCATCATGCTGAAGAAAAGCCACATCGCTGCCCAAAGTGTCCTGCTTCTTTTAATGTCCCTACGAATTTCACGCTTCATATGGCCACACACAACACTGGGGAGCCAAAGTGTCCTGAATGTGGTAGAAAGTTTGCCAGAATGGCAAGCCTGAAATCACATATGTTGCTACATGAAAAGGAGGAGAACCTCTTCTGTACTGAATGCGAGGATGCATTTTCTACAAAAgcaCAGCTTGATGCACATTTGAAACTTCACAATGAAAAGTGGTCAACGGAGGATGTGCGAAAATGCAAGCTttgtaataaacaatttacCCAGCCAGCTCTCTATCGACTTCACATACGAGAGCATTACAGGTTGCAAACCAAGATAGTGAAACACACCAAAAGAGGAACGAAGCACAAAACTATGTATAAGTGCAAAATATGCCTAAAGTCTTTCCAAAAACCAAGCCAGCTGATGAGACACATTCGAGTGCATACAGGCGAAAAACCGTTTAAGTGTAATGTCTGTAGTCGAGCTTTCACACAAAAAGGATCTCTACAAATTCACATGTGGAAACATAACGGCATACGGCCCCATGGATGTACATTGTGCAGTGCCAAGTTCAGTCAAAAGGGTAATCTGAATGCACATATACTCAGAGTACACAGCGTGCCAGAGGGCGAACCAATTTATAGATGCACCTATTGTTCTTGCGTCTTCAAAAAACTGGGTAGCCTCAATGGACACATGAAAAGGATGCACTCAAATCCCGTGGAGGACAAAACGAGTTGCGACAATTCCACGGAAGCAGATATGCAAGCCACCGTGGACACTGTAATCTCACAGTTAGCCTCTTTGGAGTCTggcataaaaaattcaatgaatccGACTAACAGCACAGCAGTTGAAACTTGTAAGAATGATATCCTTCAACAAGCACTGAAGAACAGCGGACTATctagtaaagagaaaaatttaaacaccACTGGTGCATCTAGCTTGAAGAAAGTTGAGGCTGAGACTACTTTAGTGACTCTATTGGACAGAACTACTGATGGTTCCATGAGGAAGTATATCACAATTAAGCAGCGGAGTATAGGAAGCATAAGATGGTACACGTGTTCCTATTGTCATAAAGAATTCAAGAAGCCATCTGATTTAATACGCCATTTACGGGTGCATACACAAGAGAAACCTTTTAAGtgttcgCATTGTTTTCGCTCATTTGCTTTAAAGTCCACGATGATGGCACACGAACGCACTCATATGGGTGCAAAGAAGTATGAATGCAGCTCGTGCGATAAATTATTTGCGTGTCATAGTAGTTTTACAGCTCACATCAGaatgCACGCCAAGTCTCACAGATGCACTATCTGTGATAAATTCTTCACTTCGAGTACAGTCTTGAGAAGTCATATGAAGATTCATACGCCAGAAAACTCCCAAATATCGGCCGAGGCCGAAGGTCTGGTGCCGCAAATCGTCCTGGAGGAACCGCTTATTATTAGCGATGCTGGAAATAAAATCAGTGTTGCTCAGGTTCAATCAAAACAaagacaaatttataataatggtGATGTGGCAAGACCGCACAAGTGTTGGGTCTGTCCTGCGGCATTTAGAAAGATCAGTCACCTAAAACAACACTATCGGAGACATACAGGAGAACGACCGTACAAATGTCAAAAATGCGACAGGAGATTTACGTCGAACAGCGTGTTGAAATCTCATTTACATACTCACGAAGACTCGAGACCTCATAGCTGTTCCATGTGTGGGGCAAAGTTTTCCACACAAAGTAGTATGAAGAGACACTTGGTGACACATAGCAACAAAAGACCATTTATGTGCCCTTACTGCCACAAAACTTTTAAGACGTCCGTCAATTGCCGAaaacatatgaaaattcataaacacGAATTGGCACAACAgcaATTAGAGCAGCAGAGAACACCACAGACATCGCAGCTCCCTCTGATAGAGGACAAACGTGAAATTACCTGTTTATCTGATAATCTTGAATTGACTAATGAGATGGAAGTAACGTTTCAGCCGCAAATTACTCCGGATTTTACTCAGGCATTTTCGGATCAGTTCCAAGGTATCGCTATGGACAAGGACAAAACATTCCTCTCTCAAAATGATACAACGCAACCGATAGTCAGTGAAAGTTTATCTGAAGCGGACATGGTCCCTTTAGGATCATCACAGACCTTGCATGCTGATGAAACTGGCACTATTACACTCCCTAACTATTCTGGCGATCAAACTCTAACACCGgaAAGTATACGAGAAATTGAGGAAACATTAAATCAGCAGTTGTTTAATATAGGAATGAATTTAGGTTTAGAAAATAATCTAACGAGGCAGATTAATGAGCCCAATACGGTCTCTTTAGATATGAGGGAGCAAcctgtattaaatataatttacgacAATAACAAAGGCATAGAATCGTCAAATTCTAGTGCAATTACTGGAAATATGTTTCCCACACAGTTCGATACGTTTGATATGAGTCATATTACTTTGCAGGCTGACACCGAACTAGATATAGGAATTAGTTCAGCCAATTCAACAAGTATGGCTAGTATTCTGCCACGATCAGCACAAGAAGAACAACGTCTCGTACCAGCAAAGACAACAGTCAACATTGAGGATGGGCAAACAAAAGCATCCAGACACCTCATGGTTGTAAGCTCGACGCAATCTTGTCCAGAATTATCAAGACCCGTTCAAGCTTGCCCAAAATACCCTAAAGTGATTGCAAAGGCTGACACGACGGAtgaattagaaattcaaaacgtcgataaagaagtaaaaaatcgagaggaaatgaaaatacttgaCAATCACGATGAAGAAATTGCGACGTTTACGTGTGACATATGCGATAAAATCTTCCATAAACAAAGTCAGCTAAAAGCTCATATGAAGACTCATGTATTACATGAAAGTGTCGATCAAAATAAAGACGACTTGATAATAGTTAGCGAAACAGATTCCCTCTTGCAGTGTCATATGTGTAGTAAAAAGGGTTTCGCTGCAGCCGCATTGAAAgaaCACTTAAAAACTCATCGGGGCACAAAGGAATTCCAGTGTACAGAATGTTCCTTAAGATTCTGTACAAACGGTGGACTGAGTAGACATCTAAAAATGCATGCAAGCAGACAaCAATGGAAATGTACTGTTTGtaacaaaacattttcaagtaaaatacaTCTAAAGTCCCACCGGCAAATCCATGAAATCAGCTGGAATACGAATTCAGTAGAGCCTGATAGTTCGCAAAAAGAACCATTAGCCAGAAGCACggattttttgtcaaattttaatcttaGCGTTACCACAGGAAACGATTCATCAGTTTCGCAAAAAGTCTTACTCGATACCGTAGCAGAAAAGGATATAATCGATCAtacaaatGaacaaaatgagaaaaaagagaaacaagagtATACAAACAAGTGTAAATTCTGTCCGAAAACATTTCGGAAACCAAGCGACCTAATAAGACATGTTCGTACGCATACGGGAGAACGACCGTATCAATGCGAATATTGTAACAAAAGTTTTGCAGTAAAATGTACATTGGACTGCCATCTGAAAGTGCATACAgggaaaaaaacattttcgtgTCACGTATGCAACAGTTTATTTGCAACTAAGGGCAGCCTTAAGGTCCATATGCGACTTCACACagGTTCCAAGCCATTTAGGTGTCTGCTGTGTGATCTACGATTCAGAACCTCGGGACACAGAAAAGTTCATCTACTGACCCATATGAGAGAACACAAAGGAGGACCAAAGCGAAAACCAAAGCAATCGAAGCTCAGCACTATCGCAGGTGTAGCTGCAGAATTGGAGAAGACCGTAGAAAGTGAAGTAAACGACGACACTACCATAATTAGTGAGGCTGCACAACCAACCGAGTACTCGAATCTCGATTCGATTACTATTGACACTGCAGAACTTACCGATCAAATTACGTTTAATGCCGACGGCACAATATTGAACAACAATTCCATGTTGTCAGTCAATGAAAGTAACCAATTGGTAGCCAATTTGCATTTTCTCCTTGCGAATGGTCTTGTAACTATTCAAACCGATGAGTCACTTTTAACGCATCTCCCAAACAGCGATACGCAGGTCATCCAAACTGAAACTGCAATCGCTGAACTCGTCACGTCTGAAACGCTAGAACACGTAACCTGCACCGACACAAATTCTAACATCGGTATAACGACAGAACCGTGCGAAGACGCTATTCCAGAGACTGTTTCCCAAACTGTTCCTGAGACTATTCCTCAGAACTTATCCAAAGAAATTCCACAAACCGTTAGTGATGTTGTTTCTGAAGCGAAAAAAGCAACGTTACAGAGTGTTCCCAAACAAGGAACACAGAGTAGTCAGTCCCGCAAGGAGTGCGATATTTGTGGAAAGACATTTATGAAACCGTGTCAGGTGGAGAGACACAAACGTATTCATACCGGGGAGAGACCTTACAAGTGTAATTTATGTACCAAGTCATTTGCCCAAAAAGCAACATTACAAATGCATCAGAAACATCACACTGGAGACAGGCCCCATCCCTGCCCCCATTGCGACTACTCTTTCACACAGAAATGCAATTTGCAAACTCATCTCAAGCGCGTTCACCAGTTGGACACCTTGGAGGTAAAAAAGTTACGACGCGGTCAACAGGTATTAAGTGCTAAGTCAATGCAAGATAATCTGGATGATACTAGAATACTCAGCTTGGATGATATTTCGTTTGTGGACTTCTTGAAGTAA
Protein Sequence
MLTQHTVVTESVASAIDTLPLGFIISDDGHTLLAVTERDDGAVEFMTVPVAFIHQNHTAVQSTLKGNNENSIFQISLDGDVTTGIQHSTLVPTQPCQPIPIITSEIQVSQAEKKNEIETDIEQYGIPSSLDLENPIPNKAQGNVGSESQTSIEKPVTKRSPGRPRKDETTLSIKSNNLQCEICGQEFTRQMLYKKHIEHHAEEKPHRCPKCPASFNVPTNFTLHMATHNTGEPKCPECGRKFARMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDAHLKLHNEKWSTEDVRKCKLCNKQFTQPALYRLHIREHYRLQTKIVKHTKRGTKHKTMYKCKICLKSFQKPSQLMRHIRVHTGEKPFKCNVCSRAFTQKGSLQIHMWKHNGIRPHGCTLCSAKFSQKGNLNAHILRVHSVPEGEPIYRCTYCSCVFKKLGSLNGHMKRMHSNPVEDKTSCDNSTEADMQATVDTVISQLASLESGIKNSMNPTNSTAVETCKNDILQQALKNSGLSSKEKNLNTTGASSLKKVEAETTLVTLLDRTTDGSMRKYITIKQRSIGSIRWYTCSYCHKEFKKPSDLIRHLRVHTQEKPFKCSHCFRSFALKSTMMAHERTHMGAKKYECSSCDKLFACHSSFTAHIRMHAKSHRCTICDKFFTSSTVLRSHMKIHTPENSQISAEAEGLVPQIVLEEPLIISDAGNKISVAQVQSKQRQIYNNGDVARPHKCWVCPAAFRKISHLKQHYRRHTGERPYKCQKCDRRFTSNSVLKSHLHTHEDSRPHSCSMCGAKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTSVNCRKHMKIHKHELAQQQLEQQRTPQTSQLPLIEDKREITCLSDNLELTNEMEVTFQPQITPDFTQAFSDQFQGIAMDKDKTFLSQNDTTQPIVSESLSEADMVPLGSSQTLHADETGTITLPNYSGDQTLTPESIREIEETLNQQLFNIGMNLGLENNLTRQINEPNTVSLDMREQPVLNIIYDNNKGIESSNSSAITGNMFPTQFDTFDMSHITLQADTELDIGISSANSTSMASILPRSAQEEQRLVPAKTTVNIEDGQTKASRHLMVVSSTQSCPELSRPVQACPKYPKVIAKADTTDELEIQNVDKEVKNREEMKILDNHDEEIATFTCDICDKIFHKQSQLKAHMKTHVLHESVDQNKDDLIIVSETDSLLQCHMCSKKGFAAAALKEHLKTHRGTKEFQCTECSLRFCTNGGLSRHLKMHASRQQWKCTVCNKTFSSKIHLKSHRQIHEISWNTNSVEPDSSQKEPLARSTDFLSNFNLSVTTGNDSSVSQKVLLDTVAEKDIIDHTNEQNEKKEKQEYTNKCKFCPKTFRKPSDLIRHVRTHTGERPYQCEYCNKSFAVKCTLDCHLKVHTGKKTFSCHVCNSLFATKGSLKVHMRLHTGSKPFRCLLCDLRFRTSGHRKVHLLTHMREHKGGPKRKPKQSKLSTIAGVAAELEKTVESEVNDDTTIISEAAQPTEYSNLDSITIDTAELTDQITFNADGTILNNNSMLSVNESNQLVANLHFLLANGLVTIQTDESLLTHLPNSDTQVIQTETAIAELVTSETLEHVTCTDTNSNIGITTEPCEDAIPETVSQTVPETIPQNLSKEIPQTVSDVVSEAKKATLQSVPKQGTQSSQSRKECDICGKTFMKPCQVERHKRIHTGERPYKCNLCTKSFAQKATLQMHQKHHTGDRPHPCPHCDYSFTQKCNLQTHLKRVHQLDTLEVKKLRRGQQVLSAKSMQDNLDDTRILSLDDISFVDFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01395274;
90% Identity
iTF_00293894;
80% Identity
-