Basic Information

Insect: Calameuta filum
Gene Symbol: -
Assembly: GCA_031763695.1
Location: JARPRI010000297.1:3894545-3900811[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00018 0.013 16.0 2.3 2 23 766 788 765 788 0.94

2 15 0.013 0.91 10.2 0.5 3 23 818 838 816 838 0.93

3 15 0.0022 0.15 12.6 1.8 3 21 934 952 933 953 0.96

4 15 0.86 60 4.4 0.4 2 23 970 991 969 991 0.95

5 15 0.3 21 5.9 0.1 1 19 1078 1096 1078 1099 0.94

6 15 0.0027 0.18 12.3 3.7 2 23 1118 1140 1117 1140 0.92

7 15 1.6 1.1e+02 3.6 0.3 5 21 1161 1177 1159 1178 0.92

8 15 4.1 2.9e+02 2.3 0.1 1 20 1185 1204 1185 1206 0.82

9 15 1.9 1.3e+02 3.4 3.7 2 23 1207 1228 1207 1228 0.94

10 15 0.00065 0.045 14.3 0.4 1 23 1428 1450 1428 1450 0.98

11 15 9.3 6.5e+02 1.2 0.1 2 11 1533 1542 1532 1546 0.86

12 15 2.8 1.9e+02 2.8 2.5 1 23 1842 1865 1842 1865 0.95

13 15 3.8 2.6e+02 2.4 7.1 1 23 1909 1932 1909 1933 0.93

14 15 3.2 2.2e+02 2.6 2.8 1 23 1936 1959 1936 1959 0.97

15 15 0.63 43 4.9 0.1 1 23 2062 2087 2062 2087 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00018	0.013	16.0	2.3	2	23	766	788	765	788	0.94
2	15	0.013	0.91	10.2	0.5	3	23	818	838	816	838	0.93
3	15	0.0022	0.15	12.6	1.8	3	21	934	952	933	953	0.96
4	15	0.86	60	4.4	0.4	2	23	970	991	969	991	0.95
5	15	0.3	21	5.9	0.1	1	19	1078	1096	1078	1099	0.94
6	15	0.0027	0.18	12.3	3.7	2	23	1118	1140	1117	1140	0.92
7	15	1.6	1.1e+02	3.6	0.3	5	21	1161	1177	1159	1178	0.92
8	15	4.1	2.9e+02	2.3	0.1	1	20	1185	1204	1185	1206	0.82
9	15	1.9	1.3e+02	3.4	3.7	2	23	1207	1228	1207	1228	0.94
10	15	0.00065	0.045	14.3	0.4	1	23	1428	1450	1428	1450	0.98
11	15	9.3	6.5e+02	1.2	0.1	2	11	1533	1542	1532	1546	0.86
12	15	2.8	1.9e+02	2.8	2.5	1	23	1842	1865	1842	1865	0.95
13	15	3.8	2.6e+02	2.4	7.1	1	23	1909	1932	1909	1933	0.93
14	15	3.2	2.2e+02	2.6	2.8	1	23	1936	1959	1936	1959	0.97
15	15	0.63	43	4.9	0.1	1	23	2062	2087	2062	2087	0.92

Sequence Information

Coding Sequence: ATGGAGGAATTAGACATTCAAAGCAGGCCATCTGAAGAAATCACGGATATGTCAGATATTCCTGATGATTTAAGTCATAAGTCGATGGCAATAATGGAGAACAAAAGCATCAAAGCTACCACAGACACTGAAAGAGAGGCAAATAGTTTAGAATCAGACACATGTCAATGGAGAGATATGTTGAAATTATGTACACCACTATCGATACAGCTTACACATTTATCAACAgacattttgaagaaatttacAGTGCCTAAGAAGAATGCTACACATAGACAATCAGGTAGcataaaaaatttggtaatGGACTCTAGGGATTACCGTTctagaaaacgaaaaaaaaggtatgtcagtgaaaaatttaaatatgcaAGGAGAAAGCAAAAGACAATACTTGATAAAACCTCACATCCCAATGAAAGTGTTGAAAATTCCATACTGAAATATTGTACTGTTACTTCAACAAATGATAATGCATCTACCGCTCCAGCTTGTGCATCTAAGGAACATATAAGatctgagaaaattattaatgaaactgCAATAGACAAAGTATTAGATGTGCCTATCTCTGTGGAACACACAGTTAAAGATGATACATCCTCGGTCCAGTGTCTAAATGAGAACACAGAAGATCATACccaagttgaaaaaaataatacggaAACAGAAGAATCGCGATACCAGGAATATGTGCGTAACATATTAATGGAATATTGCTACTCTTATGGGAATTTGTCTCATATGtcaaaagaaatgaatgatAACGAAAATAGTAGTGATACAAAGAGTACTGCTGGAGATAAACGACGTAGTAACGAGAATTGTCCTGATGACCAGATTCCCTCATggaattcaagaaaaagaagaaaaaaggcaCAATTAAATTCAAAGGACGAAACAATTGTTAACAGAAAATCGCCAAAGAAGAAACAACAGCCAAGAAATCAGAAAAATCTCGCATCGACACCAACAAAAGATAATAGTAGACGATCAGTTTCTATGCAACGAACTAAATCCCCGAGTTATACTCCGCCAACAGTTGAGCAAGAGATAGGGGAAACTGGCGCAGActccccaaaaaaattaaaaattcagttAATGAAGCTAGAAGATGTATCTGGCATGTATGCTCCAATAGAATCTACGGATATgattatagaaaatgaaagggATGTCTCGTCatcaatgaataatgaaaatgactcTGTAGTTGGTTCAGAAGGAATCAGCGATGCAGAGACAGTAGTGAATTCAATGTTCACAGAGGAAAGCAGAAATGGCATTGAGATTCAAGAATCTGATCACGCCTTGGATTCGCTTCCAATAATAGCACTTGAAAAGAAGTCGGGTTCTGGTTCTGAAATTTCGGACGTTTCTACCGAAAGGGATTTAAAAATGGTTGAAAAGCAGCGAAAAACGTCTATGTCCTCGGATGAAATAGTTCGCCAGAATAGTGAAGCGGATAATTATATCAATGACGTAGACGAAGCAATTGATGTAGACACTATATTAAGACTGAAGTATGGCATTAAGAAGGACCCAGTTatacttttggaaaaattgaatcttACACATAATTATGTGTCAACGAATGTTTATCAATACGATCATGATGTCAGTGACGTTCTTGAAGAATCCGACTCCACCAGCAGTGATTCGGAGATCTTTATGTTTGTAAGAAAACGTAAATCGCCATCTGTGAGGAGTCGTCGGATATCCTCTTCAAGTGAAGAAGAACACGAATCCTCGGTCAAACCTGTGGCTGCACCAGTTCCGAGTAAAGATGAGGATATTAAGAATAGAAGTCCTATTTCCAGAACTACAAATACCAGGGAAGAGACTTCGGAAGTGTTTGTTACTAATCAAACTTCAGGTACTTCTAAAGACACGTCCTTGGAGGGAAGCGAACATGTTGCGACCATTTCGACCCCAGTAAAGGCTAAAGTTTCTCAACCGGAAAATACGAACAGTTTATCTCCCAAAAGTGTTGTGCAAAATCCTAACATTGTCGAATGCAATTCAGATTCTTCGGATTCGGATATCCAGGTATTGTCAGTGATGACGATGAATTCTAATGTTCCACCAAAAACCTGTGAAACGCTCGGAATAAATTCCCCCAGCACTGCCTTGAACCCTAAAAAATCACTTTCTAGTTTATCTATTGATAATACTGATAGTGCAGTTATGTCGCATACAAATGAAACACCAATAGTAAATACACAATCACCAGTGAAAAACACGCAAACGCCATCGGGCTCGAAAATCACACCTGTTACTACAACACCAAAGCTCAGCTGTCATATATGCAACCGGAAGTACGTGAGGAAGAGATCACTCAAGATTCACATGGAGTTGCAACATAACAACGATCCCAGTAAGAAGTTCCCAAAGCCAGACACATCGTCGTGCACGACACAAGAAGGCAATAATGCAAATGAGTCCTTGGACTGCGGTAtatgttcaaaaaaatttgtctcgAAGAAAGAATTCGTCGATCACGTATTTAACCATCAGTCAGAGGCACAGCAAGATTACAGAACAGCACCTGATAAACGTTCACGAGCAGTATGGTTGGATCTCTACGGTCTGAAAGATAAGAATGCTGAAGATCAACATGTGGAGAAATccaaaaaggacaaaaaagaTTCATCCAGTGACAAACGAATTAGAAAGGAAGAGCAGATTATATCTAGCTTGACAGCTTCTCCGAAAGAAGTTATTGTATGCCCATGTCATCCTAATAATGGATTGTTAAATGAACAAGGTTCTAGCGTTTATATAGAGATGGTGTTACTGTGCGAACATTGTAATGTTGTCTTCCGGAGGAAAGAGTGCCTGGAGACACATTATCGTGTTAGCGCGCAGTGTTCCGTAAACAGGACAAGTGGCAGGGTACCAAAACTGTACTGCACTGCGTGCAATGTTACTGTGGAGTCCTTATCTGTCTTGCGTCATCATCTCGAGATGCATCCACGTCTTCAGGTCCGTGGCATAGTAACCTTCCTATGTAACATATGCAAAGTGATCTTCTTCGGCATTGGAAGTATATTTCGCAGACACTGGTTCAGTCATATAAAGAATCCTCTCTTCGTGGCTAGTCGTCATTCGTTCCCTAAGATATCTGTTATGAAAGCACTTGAAAATTACAACGTATCTGCAGAGGAAAGAATGCAGGTGGCTCAGGCTGCTCAACTGGCTGAAAACATAAAATACGTTCTCATCGCTGAGCACGTCTGTCGTAATTGTAAATTACCCTTTGGCTCTGAGGCTGATCTTACAAATCATTCAGCATCCTGCTCTGGCATTAAGAATACATCTAATGTTACTAATGCATTAAGTGATGGCACGAAATGTTCAACTTGTCAAAAAACTTTTACTGATAAGAGTAATTATGACATTCATGTTGGCAAGTGCCATGCGATGGCCGATGGATCCTCTCCTGCAAAATCAAAGGACACCAGTCATTATAGTTCTGACATTTGCCATATGACCTGTCAAACGGAAGATCAATTGACGCTGCATCAGAATAGTCAGAGAAGTGCTGGTGTGTTCTTGTGCCCTCGATGTAACGCGTCTTTCAGTGCAGTGGAGCCTTTTACTACCCATACACAAGCCACATGCACAATATGTGACAAGCAATTCGACTGCCAAAAACGGTATCAGGATCATCTGTCAAGTCATTTCACGAATCTTGCAATCAGTGAAAAACCTCAAGAATCTTCAACAAAAACACTGATctcgtgtgaaaaaaatttggaagtAGATAAAGGAACCGCCCAAAAGAATCATGTAGAAAATACGAAGGTAACTGTGAGTTCAGGCAGTTCGCCTCTTCAAGCAACACGATCTGCCGAACCAAATCAATCAAAATCGCAAACCGAAGTTAGATATCTGATAATCAGAGATGAAATCACAAAGTTACCGAAGCAAGTAGTAACTATCACTTCCGCAGGCAACACTTCGAATACATCATGTATATCTAAAGAATCTGAGCAGCAAACAAGTAttctcaatgaaattatatctatTAATAACGCCATCAAGAACGTCACGAATATCGTTGAAGTCCAACCAGCTAATATAGAAAAGGGTCCCCCGGCTTcaagtgaagaaaaagatacagcTACAACTATGGATACGGAAGTGCCAACGGATAGTTCGGAAACAAGTTCTACTACTGGGATGCCACGTAGctcaaagaatgaaaagacaCCTGCATCAGGATTTTTACGTGTGAAAAGTATGTCAGAACTTTTGGAGAAGCGTGATAAGAAATCTTACATATGTAAAACATGTGGATTGCCATGTACGTCTGCTGAGAATTTGGCAGAACATTCAAACACGCATGTCACTCAGCAAGTGGCTAACGAGAAGGTACCATCGTCGGTCAACGATGTCCAGCGTGTCATCGACCAGGATAGTTCAAGATTACTCAATCAATATATAACGTcgaacaaatttattttacagccaATAAGAAGCAATATTACCAACGCCAGTTCTAACAACTTCAATGCCGAAATGACCACTAATGTCAATAATACACAACAAGCTAACAACGAAGATATTTGTGGCAATGCCTCTGCTTTTACTCCGTGTGTGATATGCGGTACAGTTTTCAATGCCACAGAGAATCCTATTCATTGTCAAACAGCAACAACAAGTACAGGACAAGTTAATATGCATACCAACCCCAGGGTATATCAGCCCGTTGCAAATAATCAAACACAAAGTATTGAAAATGCATCTACATTTAATATAGCCGTACATCATTCTCCATTCGTAACGTATACTTCAAATACAATTGGAAGAGAACCACCTGTCAGTACTGTTAACAGTGTCAAcgtaaatttgaatatgaATCAACAAGTGGCACAACCTCTTGCAAATTCTCAATGGAATAACTTAACTTACGATACTAGAAATGTTCCTATTGTGCAGAGTCAAGTCCCATTACGGCTTCCACCTCCTTACTCAGCTCCGACTAATATTCATACTAATACCCTTCCAAAGAATACGAATAGCACCACTACTGCTACCATTAACTCTCACTGCATTGTTCCGAATCCTCCAATGCGTCCTCAGTATCCTTACAGAGCAGTCAGTCAATCAGGCAACAAATCTGTTGCTGCGAAACCCTCAAATTCTTCCTTTTCGTCTTCAACTTCGTTCACTAACAACAACACGCAGCCTATCACTACCGACGCGCCAATCGGGAATACAAGACCTTCAGGATATTCAATGAACTACAGCATTCAGAATTGCCCATTGCAGCAGTCACAAtcagatataattttacgaacAGAATCTCATGTGACACGAAAACCTGCTCACCAATCGATATCTCACACTATACATCAGCTGCCGGAGCAGCCAAGTCAGCCAAGTCAGCCAGGGTCACAACGACCAGCGCAATcatgtaatttcattaatcaaccAAAAACGACTCAAACATACCAAGAGACTTCGCAGAAAACAACCAGAGAACAACCATGCATGAATTTATCCAGCGGAGTAATCTTCACTTGTCCCTCCTGTAAAGATTTCACATGCACTACTGCTGAGGAATTGAGATTGCACCGAACTCAACATGCAAAATCACAACCGACACAGTCAAGCAAATTATACCGTACCTCAAGCTCTGATGTTGAACCTGGTGCACATAGCAGTTCATATTCTGCAACGAATCAACAAGTTCGACCAATTTCCAACGAACCGTTATATGTGTGTAATAAATGTCATACCTTCCGTACCACCAACCACGTGGAACTTCAAGAGCATATGAAACAGCATCACAAATCCTATATATGCCAGTTGTGCCATGTCTACAAGTGTAAATCCGCGGCCCAAATGCAAGATCATATTAAGCTACACATAGGTGGAAAAATTGCGCCACATGCGGTACGAAACACCCTTCAACACAATGGTAAAGCCGCGTCAAAAATTCAAGCATCGCAACTTCCGAGTTCATCCTTTAGTGAATCCTCGCACTCTGCCGGTCTTCGATCTTCACCAGTACATCAGATGCAACCGACTCAGGTCAGGAGCAAACAATATTCACAGTGTGAATTTCGCAGTAATGATTCCCAAGTGCTGGATCATGAGAGTAATAcagataatttaaattcttgtTCCAAAAAACAGGCAGAGGAATGGtcaggatttaaaaaaacggtttattatttttgtaaaatatgtcAACCAACTCCTGTATTTCAGACTGCAGCTGAGCTGGAACGACATCAAGTTAGCCGGCATCCTTAA
Protein Sequence: MEELDIQSRPSEEITDMSDIPDDLSHKSMAIMENKSIKATTDTEREANSLESDTCQWRDMLKLCTPLSIQLTHLSTDILKKFTVPKKNATHRQSGSIKNLVMDSRDYRSRKRKKRYVSEKFKYARRKQKTILDKTSHPNESVENSILKYCTVTSTNDNASTAPACASKEHIRSEKIINETAIDKVLDVPISVEHTVKDDTSSVQCLNENTEDHTQVEKNNTETEESRYQEYVRNILMEYCYSYGNLSHMSKEMNDNENSSDTKSTAGDKRRSNENCPDDQIPSWNSRKRRKKAQLNSKDETIVNRKSPKKKQQPRNQKNLASTPTKDNSRRSVSMQRTKSPSYTPPTVEQEIGETGADSPKKLKIQLMKLEDVSGMYAPIESTDMIIENERDVSSSMNNENDSVVGSEGISDAETVVNSMFTEESRNGIEIQESDHALDSLPIIALEKKSGSGSEISDVSTERDLKMVEKQRKTSMSSDEIVRQNSEADNYINDVDEAIDVDTILRLKYGIKKDPVILLEKLNLTHNYVSTNVYQYDHDVSDVLEESDSTSSDSEIFMFVRKRKSPSVRSRRISSSSEEEHESSVKPVAAPVPSKDEDIKNRSPISRTTNTREETSEVFVTNQTSGTSKDTSLEGSEHVATISTPVKAKVSQPENTNSLSPKSVVQNPNIVECNSDSSDSDIQVLSVMTMNSNVPPKTCETLGINSPSTALNPKKSLSSLSIDNTDSAVMSHTNETPIVNTQSPVKNTQTPSGSKITPVTTTPKLSCHICNRKYVRKRSLKIHMELQHNNDPSKKFPKPDTSSCTTQEGNNANESLDCGICSKKFVSKKEFVDHVFNHQSEAQQDYRTAPDKRSRAVWLDLYGLKDKNAEDQHVEKSKKDKKDSSSDKRIRKEEQIISSLTASPKEVIVCPCHPNNGLLNEQGSSVYIEMVLLCEHCNVVFRRKECLETHYRVSAQCSVNRTSGRVPKLYCTACNVTVESLSVLRHHLEMHPRLQVRGIVTFLCNICKVIFFGIGSIFRRHWFSHIKNPLFVASRHSFPKISVMKALENYNVSAEERMQVAQAAQLAENIKYVLIAEHVCRNCKLPFGSEADLTNHSASCSGIKNTSNVTNALSDGTKCSTCQKTFTDKSNYDIHVGKCHAMADGSSPAKSKDTSHYSSDICHMTCQTEDQLTLHQNSQRSAGVFLCPRCNASFSAVEPFTTHTQATCTICDKQFDCQKRYQDHLSSHFTNLAISEKPQESSTKTLISCEKNLEVDKGTAQKNHVENTKVTVSSGSSPLQATRSAEPNQSKSQTEVRYLIIRDEITKLPKQVVTITSAGNTSNTSCISKESEQQTSILNEIISINNAIKNVTNIVEVQPANIEKGPPASSEEKDTATTMDTEVPTDSSETSSTTGMPRSSKNEKTPASGFLRVKSMSELLEKRDKKSYICKTCGLPCTSAENLAEHSNTHVTQQVANEKVPSSVNDVQRVIDQDSSRLLNQYITSNKFILQPIRSNITNASSNNFNAEMTTNVNNTQQANNEDICGNASAFTPCVICGTVFNATENPIHCQTATTSTGQVNMHTNPRVYQPVANNQTQSIENASTFNIAVHHSPFVTYTSNTIGREPPVSTVNSVNVNLNMNQQVAQPLANSQWNNLTYDTRNVPIVQSQVPLRLPPPYSAPTNIHTNTLPKNTNSTTTATINSHCIVPNPPMRPQYPYRAVSQSGNKSVAAKPSNSSFSSSTSFTNNNTQPITTDAPIGNTRPSGYSMNYSIQNCPLQQSQSDIILRTESHVTRKPAHQSISHTIHQLPEQPSQPSQPGSQRPAQSCNFINQPKTTQTYQETSQKTTREQPCMNLSSGVIFTCPSCKDFTCTTAEELRLHRTQHAKSQPTQSSKLYRTSSSDVEPGAHSSSYSATNQQVRPISNEPLYVCNKCHTFRTTNHVELQEHMKQHHKSYICQLCHVYKCKSAAQMQDHIKLHIGGKIAPHAVRNTLQHNGKAASKIQASQLPSSSFSESSHSAGLRSSPVHQMQPTQVRSKQYSQCEFRSNDSQVLDHESNTDNLNSCSKKQAEEWSGFKKTVYYFCKICQPTPVFQTAAELERHQVSRHP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00297919;
90% Identity: iTF_00255458;
80% Identity: iTF_00255458;