Basic Information

Insect: Calameuta filum
Gene Symbol: -
Assembly: GCA_031763695.1
Location: JARPRI010000003.1:9066-15459[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.35 24 5.7 0.1 1 23 116 141 116 141 0.97

2 18 0.071 4.9 7.8 5.6 1 23 148 171 148 171 0.97

3 18 0.028 1.9 9.1 0.6 2 23 187 208 186 209 0.95

4 18 6.3 4.4e+02 1.7 3.7 1 23 215 237 215 237 0.97

5 18 0.04 2.8 8.6 0.5 2 23 243 264 242 264 0.97

6 18 2.2 1.5e+02 3.2 1.3 6 23 518 535 516 536 0.84

7 18 0.0014 0.099 13.2 4.9 2 23 547 569 546 569 0.96

8 18 2.6 1.8e+02 2.9 1.0 1 23 633 655 633 655 0.82

9 18 0.08 5.6 7.7 0.1 1 23 866 888 866 888 0.94

10 18 0.019 1.3 9.7 0.3 1 23 896 918 896 918 0.98

11 18 0.22 15 6.3 2.3 2 23 1014 1035 1013 1035 0.96

12 18 0.0037 0.26 11.9 0.2 1 23 1144 1166 1144 1166 0.98

13 18 0.041 2.9 8.6 0.3 1 23 1241 1263 1241 1263 0.97

14 18 6e-05 0.0041 17.5 0.6 1 23 1269 1291 1269 1291 0.97

15 18 0.0072 0.5 11.0 2.6 1 23 1340 1362 1340 1362 0.97

16 18 0.00052 0.036 14.6 1.4 1 23 1368 1390 1368 1390 0.99

17 18 0.14 9.7 6.9 0.2 2 23 1485 1506 1484 1506 0.97

18 18 3.6 2.5e+02 2.5 0.1 3 23 1515 1535 1514 1535 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.35	24	5.7	0.1	1	23	116	141	116	141	0.97
2	18	0.071	4.9	7.8	5.6	1	23	148	171	148	171	0.97
3	18	0.028	1.9	9.1	0.6	2	23	187	208	186	209	0.95
4	18	6.3	4.4e+02	1.7	3.7	1	23	215	237	215	237	0.97
5	18	0.04	2.8	8.6	0.5	2	23	243	264	242	264	0.97
6	18	2.2	1.5e+02	3.2	1.3	6	23	518	535	516	536	0.84
7	18	0.0014	0.099	13.2	4.9	2	23	547	569	546	569	0.96
8	18	2.6	1.8e+02	2.9	1.0	1	23	633	655	633	655	0.82
9	18	0.08	5.6	7.7	0.1	1	23	866	888	866	888	0.94
10	18	0.019	1.3	9.7	0.3	1	23	896	918	896	918	0.98
11	18	0.22	15	6.3	2.3	2	23	1014	1035	1013	1035	0.96
12	18	0.0037	0.26	11.9	0.2	1	23	1144	1166	1144	1166	0.98
13	18	0.041	2.9	8.6	0.3	1	23	1241	1263	1241	1263	0.97
14	18	6e-05	0.0041	17.5	0.6	1	23	1269	1291	1269	1291	0.97
15	18	0.0072	0.5	11.0	2.6	1	23	1340	1362	1340	1362	0.97
16	18	0.00052	0.036	14.6	1.4	1	23	1368	1390	1368	1390	0.99
17	18	0.14	9.7	6.9	0.2	2	23	1485	1506	1484	1506	0.97
18	18	3.6	2.5e+02	2.5	0.1	3	23	1515	1535	1514	1535	0.87

Sequence Information

Coding Sequence: ATGTCAGGACGACTTCCTCGGCTGCGTGCGCTACGTCCTCGACCTCAGCAACATCTTCAGAATACACCAACACCTACGAGGACTGAGTCTAGATATAacaaggaggaggaagaggaaattAATGACGAAGAGGACGAGTTGTTGGTTGAAGATGAGGAGGATATTGAGGGGGGAGTggatgaggaagaggaggaagaagatgagATTATTGATGAACAGGAACTGGAGGAGCAGGAGTCTGTGAATGATGATAGATTTAAGAGTGATGAAAGTGAAAAGAGACTTGTTATCAAAGAGGAACCTGGGGAAATTGTTACTGAGGAACCGGAGGACTCTGAAAGGAATTATGAGTGTAAAACCTGTAACCCACCTAAGGGTTTATCCAATCTAAAAGCTTATCTTGCACATCTTAAGACTGAGCATAAACAAAAGGTCAAGTGCTATGAATGTCCCCACTGCGAATTTGTTTGTCAGCAcgtaaagaaattacaaagacACTTCCGTGTTGCTCATGAGGATCTTCAGGACAAGGTTGCAGCTGAATCCGCGGAAAGAAGTCGCTGTCCAATGTGTGCTCACATTGCAGCCAACCCTCAGGATCTCGAAACCCATCAAAGAGTCCATCACTTGAAACGACGTTTTTTCAGATGCGCCAAGTGTTCCTACGTAACACACGTTCGTGCTCGTTATACAAAACATGTTAAATATCATTCGATGCCAATGATAAAGTGCGACGCTTGCGATTTTCGTACTCCATACAAGTGGAATTTGGATCGTCATACACGCAATCATGGTGGAGGTGGAGCCTTTCAATGTAGAGCCTGTAATTTTACAGCAGACATTCGCCAAAGTTTAACAGTACACGAAACCAATCATCATGAGCCTCCTGTAGGACGAACTCCCCGCAAGATGAACACACCTTTTGAACGCAAACCTCGTAATAGTCCAAAGCGTTATAACCAGGTGGGTGCAAGTGATTTTCGAGATACAGCGACTGGGTCGAACAATCCGGAAAAACTGAAGTCTGGCAGTCCGGCTAAGTCTTTATCTCCAGAAAAAAACTTAAGCTCATCCGAGGACAGAAGAAGTGCCATTGCCGGTGCAGAGTGCATCGCCCTCAAGTGCGAAGAGAAAGGTTGCCAATTCATCACCGCCTGGGACTCGAAGATGCAGCGACACTTGGCAGAATCTCATTCTCAGAACGCGGCAAATAAACCTAAGAAACCATTGCCTATGCTAATACCACTGAGTCCCGTAAGCAACGCCAAAGCTAACAATGCTGGAGACAGTGGTCCGGGTACGACCTTGCTGAAGGTTCCCCGGGTTAGAGTAAGACCAGAATTAGCTCGAATCGCACGTGATACAGAAATGGCACGGCTATATGGAAGCAAAGAAGCGTCCGAGCTGAAGAAGGAGGCTGGTACGACAGATTCCTTTGAGAAAAAGAACGCCTCCTTCTTCGACAAACTGAAGGAGAGACTGATGACGACTTCCGGGAACAATGGGATAGCTGAGGTGGCCGTAAGTAGCCAGAATGATTTGAAGTGTTGGTGTACCTTCGAAGCGAGTAGCCTCGAGGAGCTGACCAGTCACAGACGGACTCATCACACTGCTCTCAGTGTGTCCCTTGGCACTTCGCGTTGTCCTAACTGTAGAAGACGTTGTAAGAGCTCGGCTGATCTGCAAGTGCACATGCGCCTCTGCCACCCTACGAACAATGATTATGCAGCTACCGATAATAGCCTGGAAAACTCCACGGGTTACACGGAACTTCGCACCGCTTACCGCGGTGAATACGCGTTTCCGTTTCAAGTGGACTGGGATGCGAATTTTGGAGCGCTCAATTCTTCTGGATCCTCGGTCGAGGGTGGCTCTACGCCGAGTGGACGACGGGTATTCAAATGTCCTCACTGCCCGTTCTGGGCTTCAACGGCCAGTCGCTTTCACGTACACATTGTGGGTCACTTGAATCGGAAACCATTTGAATGTTCACTCTGCGCCTACCGCTCGAACTGGCGGTGGGATATCACAAAGCACATCAAACTTAAGGCAGCTAGAGATCCTGCGCATATGAGTGCCAGGGTTCTTATGACCGATGAGACCGGTCGGCGCAACTACTCCAAGTACAACAAGTATCTCGCTCAGATAGAGCAGCAGTCGGGAGATGAACGCATTTACGAGGAACGTACTGGTGAAGACCGTACCTCTGATGAACCACCAACTAAAGTCCTTATTATGAGTGATACCAAGGAGTATCCGCAACCTCCAGAACTTACTCCAGCACCTGTTTCTCTCCTAGCATCCACAAATTCCTCAAGGGAAATCTCGGCATTACCTTTGCGACCTCCGCCACCCTTAAAGGCTGCTACCCGAAGTCAGGGTCAGTCACTCCTGAAAAATAATCCTGCTGTCTCTAACGCCAATGCGACTGTAACGCCGACTACAGGCGTTGCTACTTCCTCTAAAGAGAGTAAACGCACTTTGTGGAAGTGTAAACGATGTAACTTTCGCGATTCCAACAAGGAGACTGTGTTAATTCATGTTAAATCTCATTATGAGTCTATGGATGATGTTGCTGAATCTGAAAAGAGTGCCTTTACATGTGAGGATTGTCCTTTCTCAGCTGCTGATGCCGAATCCTTGGCTCTGCATCGTGTACATCATCGACCCAATCTTGAAGCCATATTTAAATGTTATCTCTGTCCATACTATGTTAGCACAAAagtAGAGCTCTTGGATCATGCTCGATTACATGGAGAGGAATTGGCTGTTGTTCATCAGAGAAATGTAGAATCTGAATCACCACCTTCTAAGCgtaaatattctcaaaatcatCGTACAGTTCTAGCGAACAGCCAAACTAAAGAGGAATCATCGATGGAACAAGTTATACACATAACATCCCCAAGCACTTCAACTTCAGGTTCAGTTTCATCAAAGGGTAACGAAGCTCCACCTCTTCTATTGGATACGCGCGCCCTTCCTGATGCACCCTTAGTGTGGGTATCGAGAACAGATGGTACGATTGctaaaatgttaaaatgtcGACACTGTCCGCACGTATCATCACGCCGAGCCGAGGTCCGCGATCACGAAAGTATGCACATGAACTCACCCAACCAGGGTTCTCTCATAGCTTGTCCGAGCTGCAGCTTCGCTTGTTCACGAAGAGAAGTCATGGATTCTCATGCAGAGATGCATTCAGGCGCCCTGGGGACTGTACACTGTCTCGTTGACGAGGGTCGGACTGATGCTCAACAACTCAACGACCTCTCCACTCTCCTTGGGCTTCCTCAACCCATGGCCGTGGCTTCGGAACCTGATTTGAGGGATTCTAGGCTGGTTCACTGCTGTAGCAAATGTCCTGCACGCTTCCTATGCGAGAAGGAGCTCAGAATTCATCTGCGTTATCATTGTACGGAGCTAGCCTACTCGTGCCAATGGTGCTCGTACGCTGCTCGACAACCAGCTCATCTGCTGGCACATCAGAAAGCACATTCCCCCGAGTACCAGGACCGCACTCGTTACCTGCTCTCCCTGTATGGCCACTCGCAGAGATATCCTCCTCCTACGACGGCGTGTGTCGAGGCGAACACTCAGGATTCCGCAGAGGGTAACGTTGCTAACGTCGCTTGGATCGTCGTCGAGGTAGGGACAGGACGTAGTAATGTTCTGACTAATCACCTTACGACTAGCAGTCAGGAAACCGGAAACCAAGTGTTCACCTGTGCCAAGTGTCCGGCGCGGTACTTTAAACTGGACGCCCTGGAGTATCATATGACTCTTCATGGTACAAACAATAGGTTCAAGTGCACTGAGTGTGATTACTCATCGAAGACGGCTCAAAATCTGGTGAAGCACCAGGTTGTTCATCGTCGGCATGCCGAAGCTAACGAGAATGTGACGTCTTCCAGACTGCTACCCCCACCCGATCCACAGTTCGGCATCCTTATGCGTGGTAATCCTAACTTTGTGTATCCAGGATACCTAAGGAATGGCCGACTTCGGGAGAAACGGTACAAGTGTCACAAATGTCCGTCGGCTTTCGAAAAGCGTGAACAGTATAGGATTCACTTGACGTTACATGGTGCCAAGCAACGATATCGTTGCGATACTTGTGATTATTCGGTCAAATATTACGCGAATTATGCTCAACACTTAAGAAAACATCAGGCCAATGCCCAAGCACAAGCGTCTCGACGACGATACGAGGACGATGCTATAACTATTGACACTGGAATCCAATCTGATAGcggtatatctgtatctcgCTCTGGCAAATCCTTAACCAAGTCCTCAGCAGGTTCCTCCGCAGCTGGCAATATCTTGGCTAGTGGTAGTGCAGCGAATTCTGCCGTGTTGCAAGTTTCGAACCAGGACAAGCAGTCACTGATGCTCTTACAAAAGAAAGGTCTTCTGGTGGCACCTAGTGAAGCAGAAGCAGAAACTATTCGCTGTCAAGACTGTCCTTTTAGTACCCCTGATAAGGATGTCATGGATGCTCATAAGCGTCGCCATGGTATTGAGAGAATGACACCTCCTTGTCCTCATTGCGATTATGTACCTCGCAAGGATGAAAACGTGGGCGACCATATTCGTCTTCATTTCACCAGGCTCTACAAGCCAGACTCTTACCTCATCGCTGAATTGCTCACTCTGACGATGCGTCGTGTTCCTGCAAACGGCAAAGAGGACGCTAAGGAAAATGAATTGCTGTTCAAGGAATGTGCTGATGGAAGATTTCTACCAATAGTTGATCCGAATACGTCCTCCAGGTCTTTATCTCCCAATGGAAACAATGTGCAAGAGAAAGTCATCGTAGATCCTAATACAGGTGAAGCCAAGCAGCATCTCACtgtataa
Protein Sequence: MSGRLPRLRALRPRPQQHLQNTPTPTRTESRYNKEEEEEINDEEDELLVEDEEDIEGGVDEEEEEEDEIIDEQELEEQESVNDDRFKSDESEKRLVIKEEPGEIVTEEPEDSERNYECKTCNPPKGLSNLKAYLAHLKTEHKQKVKCYECPHCEFVCQHVKKLQRHFRVAHEDLQDKVAAESAERSRCPMCAHIAANPQDLETHQRVHHLKRRFFRCAKCSYVTHVRARYTKHVKYHSMPMIKCDACDFRTPYKWNLDRHTRNHGGGGAFQCRACNFTADIRQSLTVHETNHHEPPVGRTPRKMNTPFERKPRNSPKRYNQVGASDFRDTATGSNNPEKLKSGSPAKSLSPEKNLSSSEDRRSAIAGAECIALKCEEKGCQFITAWDSKMQRHLAESHSQNAANKPKKPLPMLIPLSPVSNAKANNAGDSGPGTTLLKVPRVRVRPELARIARDTEMARLYGSKEASELKKEAGTTDSFEKKNASFFDKLKERLMTTSGNNGIAEVAVSSQNDLKCWCTFEASSLEELTSHRRTHHTALSVSLGTSRCPNCRRRCKSSADLQVHMRLCHPTNNDYAATDNSLENSTGYTELRTAYRGEYAFPFQVDWDANFGALNSSGSSVEGGSTPSGRRVFKCPHCPFWASTASRFHVHIVGHLNRKPFECSLCAYRSNWRWDITKHIKLKAARDPAHMSARVLMTDETGRRNYSKYNKYLAQIEQQSGDERIYEERTGEDRTSDEPPTKVLIMSDTKEYPQPPELTPAPVSLLASTNSSREISALPLRPPPPLKAATRSQGQSLLKNNPAVSNANATVTPTTGVATSSKESKRTLWKCKRCNFRDSNKETVLIHVKSHYESMDDVAESEKSAFTCEDCPFSAADAESLALHRVHHRPNLEAIFKCYLCPYYVSTKVELLDHARLHGEELAVVHQRNVESESPPSKRKYSQNHRTVLANSQTKEESSMEQVIHITSPSTSTSGSVSSKGNEAPPLLLDTRALPDAPLVWVSRTDGTIAKMLKCRHCPHVSSRRAEVRDHESMHMNSPNQGSLIACPSCSFACSRREVMDSHAEMHSGALGTVHCLVDEGRTDAQQLNDLSTLLGLPQPMAVASEPDLRDSRLVHCCSKCPARFLCEKELRIHLRYHCTELAYSCQWCSYAARQPAHLLAHQKAHSPEYQDRTRYLLSLYGHSQRYPPPTTACVEANTQDSAEGNVANVAWIVVEVGTGRSNVLTNHLTTSSQETGNQVFTCAKCPARYFKLDALEYHMTLHGTNNRFKCTECDYSSKTAQNLVKHQVVHRRHAEANENVTSSRLLPPPDPQFGILMRGNPNFVYPGYLRNGRLREKRYKCHKCPSAFEKREQYRIHLTLHGAKQRYRCDTCDYSVKYYANYAQHLRKHQANAQAQASRRRYEDDAITIDTGIQSDSGISVSRSGKSLTKSSAGSSAAGNILASGSAANSAVLQVSNQDKQSLMLLQKKGLLVAPSEAEAETIRCQDCPFSTPDKDVMDAHKRRHGIERMTPPCPHCDYVPRKDENVGDHIRLHFTRLYKPDSYLIAELLTLTMRRVPANGKEDAKENELLFKECADGRFLPIVDPNTSSRSLSPNGNNVQEKVIVDPNTGEAKQHLTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01475809;
90% Identity: iTF_01475809;
80% Identity: iTF_00255423;