Basic Information

Insect: Calameuta filum
Gene Symbol: -
Assembly: GCA_031763695.1
Location: JARPRI010000617.1:506191-510278[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.12 8.3 7.1 1.2 1 23 331 353 331 353 0.97

2 20 0.94 66 4.3 0.4 1 19 360 378 360 378 0.97

3 20 0.0055 0.38 11.3 1.5 1 23 402 424 402 424 0.98

4 20 0.016 1.1 9.9 0.4 1 20 478 497 478 499 0.94

5 20 0.035 2.4 8.8 7.1 1 23 511 534 511 534 0.98

6 20 0.056 3.9 8.2 4.6 1 23 539 561 539 561 0.97

7 20 0.00029 0.02 15.4 0.9 1 23 597 619 597 619 0.97

8 20 0.00034 0.024 15.1 0.1 1 23 625 647 625 647 0.98

9 20 4e-05 0.0027 18.1 0.6 1 23 685 708 685 708 0.96

10 20 0.003 0.21 12.2 1.1 1 23 714 737 714 737 0.89

11 20 0.2 14 6.4 0.2 1 23 744 767 744 767 0.92

12 20 0.00052 0.036 14.6 0.1 2 23 776 797 775 797 0.91

13 20 0.051 3.5 8.3 1.3 1 23 847 870 847 870 0.94

14 20 0.0006 0.042 14.4 0.5 2 23 886 907 885 907 0.96

15 20 0.00013 0.0088 16.5 1.7 1 23 921 943 921 943 0.98

16 20 0.0034 0.24 12.0 0.2 1 19 965 983 965 985 0.96

17 20 0.11 7.5 7.3 0.2 3 23 1041 1062 1039 1062 0.90

18 20 0.11 7.9 7.2 0.4 3 23 1089 1110 1088 1110 0.89

19 20 0.033 2.3 8.9 0.8 3 23 1144 1165 1143 1165 0.91

20 20 0.01 0.69 10.5 0.7 2 23 1195 1217 1194 1217 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.12	8.3	7.1	1.2	1	23	331	353	331	353	0.97
2	20	0.94	66	4.3	0.4	1	19	360	378	360	378	0.97
3	20	0.0055	0.38	11.3	1.5	1	23	402	424	402	424	0.98
4	20	0.016	1.1	9.9	0.4	1	20	478	497	478	499	0.94
5	20	0.035	2.4	8.8	7.1	1	23	511	534	511	534	0.98
6	20	0.056	3.9	8.2	4.6	1	23	539	561	539	561	0.97
7	20	0.00029	0.02	15.4	0.9	1	23	597	619	597	619	0.97
8	20	0.00034	0.024	15.1	0.1	1	23	625	647	625	647	0.98
9	20	4e-05	0.0027	18.1	0.6	1	23	685	708	685	708	0.96
10	20	0.003	0.21	12.2	1.1	1	23	714	737	714	737	0.89
11	20	0.2	14	6.4	0.2	1	23	744	767	744	767	0.92
12	20	0.00052	0.036	14.6	0.1	2	23	776	797	775	797	0.91
13	20	0.051	3.5	8.3	1.3	1	23	847	870	847	870	0.94
14	20	0.0006	0.042	14.4	0.5	2	23	886	907	885	907	0.96
15	20	0.00013	0.0088	16.5	1.7	1	23	921	943	921	943	0.98
16	20	0.0034	0.24	12.0	0.2	1	19	965	983	965	985	0.96
17	20	0.11	7.5	7.3	0.2	3	23	1041	1062	1039	1062	0.90
18	20	0.11	7.9	7.2	0.4	3	23	1089	1110	1088	1110	0.89
19	20	0.033	2.3	8.9	0.8	3	23	1144	1165	1143	1165	0.91
20	20	0.01	0.69	10.5	0.7	2	23	1195	1217	1194	1217	0.94

Sequence Information

Coding Sequence: ATGGACGAGGTGGAGCAATTACGGAATGTCGAGGATTTGTGCAGATTATGTCTCTCTGTTGATCAGCCAAAGTCCTCAGTATTTCATGGGGAAGACTCTTCTGTTTCGCTTGCTACTAAAATAGAGGCATGCCTCTCGATCGAGATTTCTCAAGGCGACAAGCTCTCTACCACAATATGCACAGAGTGTGTGACGAAGGTCAACCAGTGGCATGCTTACAAAGAATCCTGTCTACGGTCCCAGGATAAGCTACGAGAGTGGTTGGCAAAACAAACTTCTTCACAATTATTGGGAAATGCTGTAAAAGAAGAGCCTGTGGAATTGGACTATAATGGAGAGGATGATGTGATCTTGACCGAATGCATTGAACCCAGTGAAAGAGATTCCAGCAACCCACAAATATCATGCACGAACGTTCAGGAACATTCTgaggagaaaaagagtgaagaTGTCAATGAGGAGTCACAGTGTACCGAGTTGTTAAAGAATATAGTAAATTCAGAAGTTTCGGGTAGCTCCACAAAAGAACCAGTTCATGAGGAGCAGCTTCCGATAAAAGCTATAAAGAAAGAACCATTGTCAAATCATGAAAATGATACCAATGTCGAAGTGGGTCCAGTGCCAGGTGGAGAGTTGCTTCTCAATCCTTTAgccgtaaataaaaataaaccagACATGGTAATGGAGGCCGATTCAACCCAGAAATCAACGTCAGCGGTAGTCACtgtcaaaagaaaaATCCATCTACATTCAAAATTCACGTACGCGAAGCACAtggcaaaatttcattcagaCCCAGATAATACTCAAGAAAATCAAAACGTAGAAGCGCCAGCGAAGGCGCCACCACCTCGAAAGACAAAAGCTGTAACCGAAGTATCGGAAGAAGTTGAAGAGATGATCGAGGACGTGGAGGAGGAAATAGACATCATGGATCAGAACTCATCTCTTTCGCAAGTTCAGCAAAGCATAATCAGTCAGTTGAAGACATTTTCGTGTTACTCTTGTCAGCTTTCATTTCCGGACCGTCGCAGTACATTGTATCATATTCGAGAACACATGCCTGACCTGCGACCTTACACTTGCGTGGCATGCCTAACTGAATTTTCCGATAGGTCCACTTATCAGTCTCATTGTGGTGCGTCTGTCGAGTGTGCCATGAAGATAGCACTTGTAGTGCCGACAATGGGTATCGAGAAGCTCTTCACGTGTAACATGTGCCTGCGGTCGTTGAACAATCGCAAAGAACTGCTCAGTCATTTGTCCAAACATTCTGACAAGCAGTACGCAAAATTGACGACGTCAATGAGCGTTCCTCCCAAACTGAAACCGATAACCTTACTGACGTTGGAGGAGACGAATACCGTGTCCGACGATCGTATCTACGCTACCATGCCGCATCCTTATAAAAATGGCGATCCTGCGTTCAATCACGAGTGCAACTTCTGCGGGATGATATATCGATACAAGCCAAACATGTTGAAGCACCGTGATATATGCAAAAAACTTCCGCCGGACGCTCGCACCGTCTACAAGTGCGTCCATTGCGGCATGACCTTCAGGGTCTTCAAGAAGTTTCACTCCCATACGAGAGTGAAGCACAAGAAGAGGGAATTCGTTTGTTCAAAGTGCCACGGGAAGTTTCGATCGCCCCGTGATTACCTGTCTCATCATGAGAGTCATACGAAGGTCACATCAAAGAATGAGAGGTACCTGGTAACGGAGAACGGAGAAGACGTGATCCTGAATGACGAAGAGACCAGCTTGCCGAGGATCAGTGAGAAAAAGTATAACTGTGGGATGTGCAACATGGATTTTGGAAGCAGGTCTGAGCTGACGAAGCACAGGAACCAGCATCTGAAAGTGAAGATCTACTCGTGCGTAATCTGCAGGAGTATGTTCAGTAGTCCAGGTGCCCTGGAGATCCATATGAAGGAGCATGGGATCGAGGATCCCAAGGAGAGAAAAGCAAACAGTTCCTGCGTGGAGTACAGAACTCCTAGGGAGGGTGAACATAGTACAGGCCACGTTACAAATTCCAGTGAGACCAGGTTCAACTGCGACAGTTGCATCAAGAGTTTCTCCAACCTGGCGAACCTGCGACGACACATCAGGAGCGCGCACACACCTAACGAGGTCTTCAAGTGTCCTGATTGTTCAAAGTTCTTCAAGGATAAAACCATTTACGAGCAACATGCCAAAGCTGAGCACAAGTCTTCAAGGCCGTCTTATCAGTGTATCACGTGCACAAAGATCTTCGCCCTGCATGCGAACCTCGCCCTGCACATCGTGAACGTCCACGAGAACAAACTGGGCACGAGGTTGCAGTGCGACATCTGTGGCAAGAGATTTGTTGAGGAGACATCTTTGCGGATTCATAAAGGCTGGCACGCAAGGGCCAATTGTCGTTTGAACGCTGACAAGTTTCCAGGTGACGTTAAGAGGGTCAAGATCGAGCCTAACCCCGTGGATCCGGTGAAGCCGGCCAGAGCCAGAAAGTCCTTGCCAAGCGTACCAACTGCTAGGCAGTTGCATCAGTTTCAGTGTTACGTttgtcatgaaaatttcaggGAGATCAATCGCCTCAAGGTGCATCTTCAGGATGTTCACCAAGCGGACGGCAAGGACGAGAAGAGTCACGTGAACAAGGAGCTGCACTGTGAACTCTGCGCTAACGTGTTCCCGGACAACGACAGCCTGCAGAAGCACATGAAGTGGCACAAAGAGAATCCAGCTCCGAGTGCCCAGAAACGTAAGAATTTCCAGTGCGACGTCTGCGGCAAGTATTACACCCTGAAGAAGAGTCTGGCGCGTCACAAGAAGCTTCACAAGGCTACAGCAGCGGTGTCCTTGAAGTTTCAGTCTCTAACGAGAAAGCAAACGGCTGCCGTCTATCAGTGCCCAGCATGTCGCAAGGTCTTCGACACCTACATGGGTCTGCAGAGGCACAAAGTCTGTCACGGGTCCGAGCCCAGTACACAGAAATCTTCCCAATCAGCTCGTGGGACGAGAACGTCGGTCAACGTGGATCACGAAGACCTGAGGAATCCAAAAATCGAATTGGACGATTCACCGGAAATCGATTCCCTCGACAACACTGGCGCCAAGAAACCGCTCACGTGCATACTCTGCAAGAAGGTCTTCCCCGGCATGAGTATGCTCCTTAAGCACAAGCAGGTCGCTCACAACATACGTTACAATAGACAGTCGAAGCAACCTAAAGTCGAGTTCATACCGATCCTCCAGCGAAGCGGTCGTGTCGCCTGTAATCTTTGCTCCAAGGAATTTCCAACGTTGCCAAGACTCAAGCAGCACTTCACCCTGATCCACAAGTCTGAGCACAGTGGCTGCACGGCTCATTGCTGCGACCCTGCAAACGCCACTGTCtcgaaaacgaagaagaaggtcCACGGTGGGCTCGTCGTCTTTTGTAAACTGTGCGACAAGCATTTCGATAACAAGCCTGACGTGGTGGATCATCTGATCGGGAAGCACAGATGCGGTGGCGATTTCGATAAGCAGGATAAATTCTTTTCCGTGCTGAACTTGGACACTTATGTGGTAAACGGCGCGAACGGTACTGTCTGTCCTActtgcaatataaaatatccaaatttgAGATCactcaaaattcattatttcaaatttcatgatTCTACATGA
Protein Sequence: MDEVEQLRNVEDLCRLCLSVDQPKSSVFHGEDSSVSLATKIEACLSIEISQGDKLSTTICTECVTKVNQWHAYKESCLRSQDKLREWLAKQTSSQLLGNAVKEEPVELDYNGEDDVILTECIEPSERDSSNPQISCTNVQEHSEEKKSEDVNEESQCTELLKNIVNSEVSGSSTKEPVHEEQLPIKAIKKEPLSNHENDTNVEVGPVPGGELLLNPLAVNKNKPDMVMEADSTQKSTSAVVTVKRKIHLHSKFTYAKHMAKFHSDPDNTQENQNVEAPAKAPPPRKTKAVTEVSEEVEEMIEDVEEEIDIMDQNSSLSQVQQSIISQLKTFSCYSCQLSFPDRRSTLYHIREHMPDLRPYTCVACLTEFSDRSTYQSHCGASVECAMKIALVVPTMGIEKLFTCNMCLRSLNNRKELLSHLSKHSDKQYAKLTTSMSVPPKLKPITLLTLEETNTVSDDRIYATMPHPYKNGDPAFNHECNFCGMIYRYKPNMLKHRDICKKLPPDARTVYKCVHCGMTFRVFKKFHSHTRVKHKKREFVCSKCHGKFRSPRDYLSHHESHTKVTSKNERYLVTENGEDVILNDEETSLPRISEKKYNCGMCNMDFGSRSELTKHRNQHLKVKIYSCVICRSMFSSPGALEIHMKEHGIEDPKERKANSSCVEYRTPREGEHSTGHVTNSSETRFNCDSCIKSFSNLANLRRHIRSAHTPNEVFKCPDCSKFFKDKTIYEQHAKAEHKSSRPSYQCITCTKIFALHANLALHIVNVHENKLGTRLQCDICGKRFVEETSLRIHKGWHARANCRLNADKFPGDVKRVKIEPNPVDPVKPARARKSLPSVPTARQLHQFQCYVCHENFREINRLKVHLQDVHQADGKDEKSHVNKELHCELCANVFPDNDSLQKHMKWHKENPAPSAQKRKNFQCDVCGKYYTLKKSLARHKKLHKATAAVSLKFQSLTRKQTAAVYQCPACRKVFDTYMGLQRHKVCHGSEPSTQKSSQSARGTRTSVNVDHEDLRNPKIELDDSPEIDSLDNTGAKKPLTCILCKKVFPGMSMLLKHKQVAHNIRYNRQSKQPKVEFIPILQRSGRVACNLCSKEFPTLPRLKQHFTLIHKSEHSGCTAHCCDPANATVSKTKKKVHGGLVVFCKLCDKHFDNKPDVVDHLIGKHRCGGDFDKQDKFFSVLNLDTYVVNGANGTVCPTCNIKYPNLRSLKIHYFKFHDST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01474139;
90% Identity: iTF_00253778;
80% Identity: iTF_00255291;