Basic Information

Insect: Calameuta filum
Gene Symbol: -
Assembly: GCA_031763695.1
Location: JARPRI010000310.1:1264732-1268567[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.0035 0.24 11.9 2.1 1 23 395 417 395 417 0.97

2 21 0.0025 0.17 12.4 0.1 1 20 425 444 425 445 0.96

3 21 0.012 0.82 10.3 0.3 1 23 454 476 454 476 0.98

4 21 4.5 3.1e+02 2.2 0.3 2 23 503 524 502 524 0.78

5 21 0.046 3.2 8.4 0.8 1 23 532 555 532 555 0.92

6 21 0.0012 0.083 13.4 1.6 1 23 561 585 561 585 0.92

7 21 1.5 1e+02 3.7 0.2 2 23 618 639 617 639 0.91

8 21 0.14 9.6 6.9 0.6 2 23 648 670 647 670 0.93

9 21 0.00079 0.055 14.0 2.2 1 22 676 697 676 700 0.91

10 21 0.0003 0.021 15.3 6.5 1 23 784 806 784 806 0.98

11 21 0.0034 0.24 12.0 0.2 1 23 813 836 813 836 0.95

12 21 9.9e-05 0.0069 16.8 2.1 1 23 842 864 842 864 0.98

13 21 0.00068 0.047 14.2 2.1 1 23 870 892 870 892 0.97

14 21 2.1e-05 0.0015 18.9 0.8 1 23 898 920 898 920 0.97

15 21 0.015 1 10.0 1.0 1 23 933 956 933 956 0.96

16 21 0.00015 0.01 16.3 3.9 1 23 972 995 972 995 0.96

17 21 0.0011 0.079 13.5 1.3 1 23 1003 1026 1003 1026 0.96

18 21 5.7e-05 0.0039 17.6 1.6 1 23 1032 1054 1032 1054 0.98

19 21 0.0071 0.49 11.0 6.9 1 23 1060 1082 1060 1082 0.98

20 21 0.00012 0.0086 16.5 3.1 1 23 1088 1111 1088 1111 0.98

21 21 0.077 5.3 7.7 5.4 1 23 1117 1139 1117 1139 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.0035	0.24	11.9	2.1	1	23	395	417	395	417	0.97
2	21	0.0025	0.17	12.4	0.1	1	20	425	444	425	445	0.96
3	21	0.012	0.82	10.3	0.3	1	23	454	476	454	476	0.98
4	21	4.5	3.1e+02	2.2	0.3	2	23	503	524	502	524	0.78
5	21	0.046	3.2	8.4	0.8	1	23	532	555	532	555	0.92
6	21	0.0012	0.083	13.4	1.6	1	23	561	585	561	585	0.92
7	21	1.5	1e+02	3.7	0.2	2	23	618	639	617	639	0.91
8	21	0.14	9.6	6.9	0.6	2	23	648	670	647	670	0.93
9	21	0.00079	0.055	14.0	2.2	1	22	676	697	676	700	0.91
10	21	0.0003	0.021	15.3	6.5	1	23	784	806	784	806	0.98
11	21	0.0034	0.24	12.0	0.2	1	23	813	836	813	836	0.95
12	21	9.9e-05	0.0069	16.8	2.1	1	23	842	864	842	864	0.98
13	21	0.00068	0.047	14.2	2.1	1	23	870	892	870	892	0.97
14	21	2.1e-05	0.0015	18.9	0.8	1	23	898	920	898	920	0.97
15	21	0.015	1	10.0	1.0	1	23	933	956	933	956	0.96
16	21	0.00015	0.01	16.3	3.9	1	23	972	995	972	995	0.96
17	21	0.0011	0.079	13.5	1.3	1	23	1003	1026	1003	1026	0.96
18	21	5.7e-05	0.0039	17.6	1.6	1	23	1032	1054	1032	1054	0.98
19	21	0.0071	0.49	11.0	6.9	1	23	1060	1082	1060	1082	0.98
20	21	0.00012	0.0086	16.5	3.1	1	23	1088	1111	1088	1111	0.98
21	21	0.077	5.3	7.7	5.4	1	23	1117	1139	1117	1139	0.97

Sequence Information

Coding Sequence: ATGAATTCTGCAAAAACGTTCATTGTGAAGGTAGAGAACTCACATATTACATTATCAGTAGCAGACACATTTAAAGACCTGCAGATGAAGTTGAAAAAACATGGGATAGATGTAAACACAGCGTCAATGctaattaaaggaaaaatggtAAATGAATCTTCTGTCGTATCAGAGTGCCTTAGTGTcgAAAGTAAGGATGTTGAGGATGAGACTATAGAATTCGTATTACCAGATTTATCTGAAATCTCAGAAACAGAAATGATTTCTGATCAAGaTGTTGAGACTCCAGAGATTAAGTATTCACTGTGTCGATTATGTGGTATTACGACAGAAGACccaattgatatttttgaggaatcaaatattacagaaacaataaacaaattattacCGATATCTATATGTCAACAAAAAACACTATCACAATACATATGCAGCCCATgctataagaaaattattttcattcaggattttgttttactttgtatagaaaatgaaaaacgattGTCAAATCTAACTACTTCAACAAACCAATCCATTGAAATTCCAGTGAATGACAATACTGAAATTGAGAAAGTATTGCAAATGCATgacaaaacaaataaatacagatGTCCCAATTGCAAAGTAAATCTAATCATCTCCAAAGATGttcaatcgaaaaattttgatagtgCCTTTCAAATAACTTTAAATTCAACAGAGAGTACAGATAAATCTGAGATAAATGCagagataaagaaacaaaaaacggATGTCGTATCACGGAAAAGTACACACAAAGGAATAAGAACCACATTGGTAAGAAATTTACGATCATCTTccaatttacttaaaaaaagtaatacaattAGTGCAAGACATACAAGAAGGCAAACACAGAATATATCTAGACCTACAGAGAGCCACgcaaaaagtataaataacagtttaaataaaaaatcttttcgagAAAAGAGTAAAACTAATTTACGAGATATCAGAAAGAGAATAACGAATAGCGATCATGACAATGAACAGCATACACAGTCAccaaagaggagaaaaatggTTTCTAAGACcacaaaaaatacttttcttacAATTGATCCGAATTTGAAGTTTTCTAATACTACCGGtgaattcattgaatttgatACTCTGGAAGAAAGTAATGACGAGAGTGTAAAAAGgccaatgaaatataaatgcgATATATGtgatttagaattttcttcgGAAGATCATTATCGGTTTCATGTGAATCGACACGAGACGGGAtgttttgatgattttaaatGCCCTACATGTAAGAAAGAATTATCCTCTGAGGATAGCTTATGGGAACATCAAGAATGCTGTGAATTAGATCTTGAATACTATAGTTGTACGTTATGCCAGGAAACGTTccttgaaaaagaattattaaatgatcatTTGCAAATTCACGATCAAGAGGATGAAAAATCACTTAATACAGATACGGATACATTTCAAtcagaaaatggaaaaaaatcaactaaaTTAACGTGTAAAGTATGTGGAGCGCGCTATGTATTACGGGAAcgatatgaatttcatatagAAAGACATAATTTTGGAAACatcaaaactttttcatgcctaatttgtgaaaaaagatttaagaGTGAAAACATTTTGTGGGATCATTACCAATATCAACATAGAGCGGGCGAGAAATTCGCGTGTTTAACTTGtgagaaaacatttttcaaacgaGCAAACTTGAATTATCACTTAAAAACATTTGGCCACAAGGGTGGAAAATTCGTGAACAGCATTAAGCATAATCAAAGCACCGACTCCAATAACGTGAAACTGTCTGAGGTTGGTAAAGCACGGCCTAAAATAACTTGTTTAGAATGTGGAGCTCGTTTTGTTTTACAAGAAAGATATGAATTCCATATGGAAAGACATAAATCTGGAAAAATGGATGTTTGCGTGTGCAATCTGTGCGGTAGAGAATcaacaaatgaaaatgttttgtGGGATCATTATCAGTATATGCACAAACGCACGAAACGTTACGTTTGTACTACTtgtggaaaattatttcacaaacAGTCAATGTTGAGTAGGCACCAAGTCAAATATGGTCACAAAggtacaaaagaaataaatatcgaaacgGATGACAATGCAATAACAATAGACAGTGCTGCTTTTAAAAAGGTCATAGCTGAAGagataatagaaatgaaatcaGTGAATTGCGTACTCTGTGGAGAGGTAGTATGGGGTGTGGACCCAAATTTGATAAACGATGCTGTTACCTGTTCGAATTGTGAGAGACCTGGACTGTCTTTGCAAGTAGATTCCGACGGTGCTAAGGTAATATCACGTCGTCAGTACCACTGCAACATGTGTAACAAACATTTCACAACAAAAGATCGCCTAGAGTATCACATAATGCGCCACTCGGAAAATATGGAAGAATTTGTTTGTAGTACTTGTGGAAAGGAACTCAGTACCGAACAAGCTTTGTTTGAGCATTACTTATACGTGCATAAGGGTGCAAGACCACACGTTTGTGAGCTTTGTGGAAAATCTTATCAATTCAAAGCTCGATTAAAGGAGCATATGAGAAGTCATAGTGGAGAACGACCATTCGCCTGTGAAATATGTGGTCAACGATGTATGACGAATAATGCGCTACGTTCTCACAAAAAAACTCATATCACAGAGAAGCGATTTCCATGTCAAATATGTAAGAAGGCATTCAGAAAAAGACAGGATTTGAACGAACACTTGGAGAGACACTGGAAGAATGACAAGACGATGACATTACCACAAGTGTTTAGTTGTTCTATATGCATGGAGATGTTTCCGACTTTTCGGGTTCTAAAAAAGCACATGAAAGAGACTCACAGTGTGGAGAGTCAGGATCCCATATTGACTGAATTGCAACCATGGTTTGAGTGCGAAGACTGTCACGAGAAGTTCAAGCATCAAATGTCTTTGAAAGTTCATCGGGAGAGGGTTCACGAGGGTAAAATGAAGCCCGTTTATCATTGTGACATATGTGATATCACATATAAGAATGCACGTGTACTCTCAAATCACATTAAGAATAAACACGAGGGTGGTAAGCGGTATAAATGCGCTCAATGCGGTAAAGAGTACAATCAGTCTACGTCTTTAcataatcatattttattgcataCTGGAGAAAAGCCGTTCAGTTGTGAACATTGCGAAATGACGTTTCGCACTAAGGAATCCCGTGATCATCATCAACGAAAACATACTGGAGAGCGTCCTTATAAATGTCCACATTGTGACAAAGCATTCGCTACTACAACTCAACGTCGAGAGCATCGAAAACGAGAACACGATGAAGGCAATAATCATCATTGTCCGGAATGTGGGAAAGTATGTTTTGGTGAACATGGCGTAAGAAGTCATTTAAATACTCATATGGCCGAGAAACAGCAGTCCCAGAATGATATTACGTAA
Protein Sequence: MNSAKTFIVKVENSHITLSVADTFKDLQMKLKKHGIDVNTASMLIKGKMVNESSVVSECLSVESKDVEDETIEFVLPDLSEISETEMISDQDVETPEIKYSLCRLCGITTEDPIDIFEESNITETINKLLPISICQQKTLSQYICSPCYKKIIFIQDFVLLCIENEKRLSNLTTSTNQSIEIPVNDNTEIEKVLQMHDKTNKYRCPNCKVNLIISKDVQSKNFDSAFQITLNSTESTDKSEINAEIKKQKTDVVSRKSTHKGIRTTLVRNLRSSSNLLKKSNTISARHTRRQTQNISRPTESHAKSINNSLNKKSFREKSKTNLRDIRKRITNSDHDNEQHTQSPKRRKMVSKTTKNTFLTIDPNLKFSNTTGEFIEFDTLEESNDESVKRPMKYKCDICDLEFSSEDHYRFHVNRHETGCFDDFKCPTCKKELSSEDSLWEHQECCELDLEYYSCTLCQETFLEKELLNDHLQIHDQEDEKSLNTDTDTFQSENGKKSTKLTCKVCGARYVLRERYEFHIERHNFGNIKTFSCLICEKRFKSENILWDHYQYQHRAGEKFACLTCEKTFFKRANLNYHLKTFGHKGGKFVNSIKHNQSTDSNNVKLSEVGKARPKITCLECGARFVLQERYEFHMERHKSGKMDVCVCNLCGRESTNENVLWDHYQYMHKRTKRYVCTTCGKLFHKQSMLSRHQVKYGHKGTKEINIETDDNAITIDSAAFKKVIAEEIIEMKSVNCVLCGEVVWGVDPNLINDAVTCSNCERPGLSLQVDSDGAKVISRRQYHCNMCNKHFTTKDRLEYHIMRHSENMEEFVCSTCGKELSTEQALFEHYLYVHKGARPHVCELCGKSYQFKARLKEHMRSHSGERPFACEICGQRCMTNNALRSHKKTHITEKRFPCQICKKAFRKRQDLNEHLERHWKNDKTMTLPQVFSCSICMEMFPTFRVLKKHMKETHSVESQDPILTELQPWFECEDCHEKFKHQMSLKVHRERVHEGKMKPVYHCDICDITYKNARVLSNHIKNKHEGGKRYKCAQCGKEYNQSTSLHNHILLHTGEKPFSCEHCEMTFRTKESRDHHQRKHTGERPYKCPHCDKAFATTTQRREHRKREHDEGNNHHCPECGKVCFGEHGVRSHLNTHMAEKQQSQNDIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00293924;
90% Identity: iTF_00293924;
80% Identity: iTF_00255274;