Basic Information

Insect: Calameuta filum
Gene Symbol: -
Assembly: GCA_031763695.1
Location: JARPRI010000554.1:392706-396899[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.22 15 6.3 0.1 1 23 74 96 74 96 0.97

2 13 0.0038 0.26 11.8 2.7 1 23 134 157 134 157 0.98

3 13 2e-05 0.0014 19.0 0.5 3 23 165 185 163 185 0.97

4 13 0.001 0.07 13.7 5.3 2 23 192 213 191 213 0.94

5 13 8.5e-07 5.9e-05 23.3 0.3 1 23 219 241 219 241 0.98

6 13 0.099 6.9 7.4 3.8 1 23 286 308 286 308 0.95

7 13 0.32 22 5.8 0.3 2 19 316 333 315 333 0.80

8 13 4.1e-07 2.9e-05 24.3 2.4 1 23 1063 1085 1063 1085 0.98

9 13 0.00012 0.0086 16.5 0.7 1 23 1092 1115 1092 1115 0.95

10 13 8.5e-05 0.0059 17.0 0.1 1 23 1123 1146 1123 1146 0.97

11 13 0.017 1.2 9.8 5.8 5 23 1155 1173 1152 1173 0.96

12 13 0.0023 0.16 12.6 4.1 1 23 1179 1201 1179 1201 0.98

13 13 2.4e-06 0.00017 21.9 1.2 1 23 1207 1229 1207 1229 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.22	15	6.3	0.1	1	23	74	96	74	96	0.97
2	13	0.0038	0.26	11.8	2.7	1	23	134	157	134	157	0.98
3	13	2e-05	0.0014	19.0	0.5	3	23	165	185	163	185	0.97
4	13	0.001	0.07	13.7	5.3	2	23	192	213	191	213	0.94
5	13	8.5e-07	5.9e-05	23.3	0.3	1	23	219	241	219	241	0.98
6	13	0.099	6.9	7.4	3.8	1	23	286	308	286	308	0.95
7	13	0.32	22	5.8	0.3	2	19	316	333	315	333	0.80
8	13	4.1e-07	2.9e-05	24.3	2.4	1	23	1063	1085	1063	1085	0.98
9	13	0.00012	0.0086	16.5	0.7	1	23	1092	1115	1092	1115	0.95
10	13	8.5e-05	0.0059	17.0	0.1	1	23	1123	1146	1123	1146	0.97
11	13	0.017	1.2	9.8	5.8	5	23	1155	1173	1152	1173	0.96
12	13	0.0023	0.16	12.6	4.1	1	23	1179	1201	1179	1201	0.98
13	13	2.4e-06	0.00017	21.9	1.2	1	23	1207	1229	1207	1229	0.98

Sequence Information

Coding Sequence: ATGTTGTTCGTCAAGATTGAAGACAATGGAAAATATGACAGCCTGACATCAAAAAgcAAATGGATTATTAGGATTATGAGTAAAATGCTTGCATTTCTACAGAATGTAGAAGGAAATGATTCCAGATCTAAGAATACTGCTGAAATATGTGGCACATCTTTAAAAGCCAATGCAGATCCTGTACAGAATCCTTGTCCATTGGATGTCAAACCCAAAGATTTTATATGCTCAGTTTGTGGTGATGGCTTTGCaggagaaaaacaattttatggaCATTTGCAAACACATACAGGAGAAATACATTGGAAGTGCACTCAATGTCCAGAGTCCAATGTTGGTTTCGATTCTCTTTCGAGGCTTAAGATTCATGAGAATGCTTGTCATAATATAGTTAGACCTTTCAAATGCAAGCACTGCGATTTACTTTTTGACCGAGCTTCTCAGCGAGATTATCATATGAGAAGTGTGCATTTCGGTGAAAAATCACAAATATGTCAGATATGTGGTAAAGGATTTTTTCGCAGAAATGATTTACGTACTCATCTGAACATTCATTTAGGTACAAATCTTTGCATTTGCGAAATTTGTGGAAGGAAATTCAATCATGTATCAAATCTCATTAGACACTGTAGAATTCACGCAGgagTGAAACCATATCCTTGCTCTATATGTGGCAAGAGATTCACACAAATTGGTTCTTTGGCAAGGCATAAAAGAATTCACAGCCGAGAACAAGATAGTATTAAAGCTTGCTCAATCAAAAACCAAGCGCCTTTCGATCTTAAAAATGAAGTTTCCAACAAACATGATTTGCAAGGTGTGGAGCCAAGTCAGCATAAGCCTAGTAAACGCCAGCACTATTGCAAAATTTGTGGGGAAAGTTTTCAATTCATATTGCTGTTACGGCAACATGAAAAACATCACTTGCACAGTGCTGAAGATTTGGAATGCAAAAGCTGTGGAAAGACATTCCAGAAAGTAGAAGAAGTCAAGGAACATTGCTGTCGACCGCTTTCTTCTTGTGATGTTAAAGTCACAGAAAACATTGTTAAAAAGCTTTCGAAATTCATTagaaagacagaaaatttaaatgacacAGCTGATGGCTCTCACGGCGCTGAAACTATTCTAATACAATTACaggatgaaagaataaaaaatgctgCAACTTCTAACATAtcaatgaatgaaattaaagaacaACCAATCCAAGGACAACCTATGATATACTCAGGATCAGATCAGGTCACCAATTTTAATTCGGAAGAAGCTGAAGAAAtaccaaatgaaatattacaagaACACTTGATGGAACTTGCTggcaaaataaatacaataagcATGGCACCAGACCGGGATGCTAGCATCAATATTTCTGAAATACTTGAAACGTACAATTGCGAGGATGCGGAGTTTGGAACtgataatgatataaaatcgaaaccatatgaaatccaaaatattGGAGTACAaagtgataacaatttttcaagagaaaataacattatttatatacaaacatTAGGCAAGGATGGGTTTGCAATTTTAACTGATCATGAAGGTATAATGAGAAATGTCTCTTTAGACATAGTGCAAGAAGCAAATAATACGAATTATCAACCTAATATAGAAAATTGCCATTCTGATATGTCAGAagtgcaaatttcaaaaagtactgAACTTCCATCGATAGCGACACAATTATCATGCGTACTAAAAtcatttgatgaaaaattgatcaatcaGAACTTTAATTCTAATGGACCTTGTGCAAttgattcaatttcaaaactgATGATGTCACAAGAAAAATTGGATTGTAAGCCTTTAAATACGGAAACCACAACGAAGGCAGATCATTAccataatttaaaagaaaaaaatcagtttaatATGGATATTTGTAATTCAAGTACCTTAAAAAACTGCCAATTGAAAACACCCGAATTTCAAGATAACTCTGATATGTCACTTGCGCATGGGAATCATGAATGTGCAAATGCTGAGCCGCATTATTTGTCATCTTGTGATGATGACGCAGTATCACAACCTTTTTTCTCAAATACTAGCGCAATGGAGTCGACAAAAAACGATGAACAAGTGCAGAACcttgtcaattttgaaaatattgttttaaatcGGACTGACCCAACGTTGCGTTTAGTCCAAACTGAAACTGGTGAACAATTTTATGagttaatattaaatgatttgacagataaaatatcaaactcTCCAAACATTCAAAGTTTACCAGAACCTGATAAAACCAATAGTATGTCAACCTCCTGTGACATATCCAAAAATATCGAAACAATGAGCAACGATACCTCTAAACAACCTAGTTTACGTTTGGTACAAATGGAAAATGGACAgcagttttttgaaattgttcgGAACGATTCCTtggaattggaaaattttacatcaccATTGCACGAGCCACAAACCTTACAAGTAAATAATGCTGAGAATCCCATTGAAGTTAATATCAACTTACAGCcggataataatattgaaacaaataatttaaaacataatgaaaataatcaatatttcttcGTAAACGAAAGTCAGGaagtaaattcaataaatgctTTAACAAATGATATAGTTACTGTTCAACATTCGAATTTGGAATTCGTGAAGAGTGATGCGCAgtctgattttcaaaataatgatcAAACAAACTTTACTGACTTTGCAAAAACTCATTTTGACAATAGCGCAGAACACTTTCTCGAGCTTGCACGAAACGTTGACAATGGTCAAAGAACAGTTCCAGAAGAAGCAGATCGACCTATGCCGATAGTACGTCTCATACAAAATGAAGATGgcgaacaattttttgagttAATTCACGATTCCTTACAATTCGACAAAAATCGTCACTTAGAACtacaaaatgaaagaatggataaaaattcttccGCAAATATTCAAGACACAAAGACATTAAATGATCCAGActgtaataaatcaaatttgttaatttgCTTCCGAAATAATTTAGAATTCCgaccaataataaatatggaaGCAAATACGACAAAGGAACTTACTGGCGACGGTAATGATAAATCAAACACTATCAATTTCTATATAGATTTTAATCCAAACAATACTGCAGCTACAAGAAGTATCGTAGAGGAACAAAAACAGAAATCCAAATCATccataaagaaatttcagtgTTCTGAATGCAATAAGAGCTTCTCTAGTAGCTACAACTTTAAGCAACATATTGGCACACATTTTACAGATCAACAAAAGTTTCAGTGCAAAGAATGTGGAACCCAATTTGCATGGAAATCAACATTGAACAAGCATATGGCATTATATCATAGACCGGATGGGCCACAGAAATTTGTTTGTGAAATTTGCCCAAAAGTATATAACACTCTTTCTCAAGTGAATGAACATGTGAAAAGGGACCATTTGAAAGAACGGAAGCATGTCTGCCATTGtggtaaatcattttttaagaaattcgaCCTAAAAACACATGGAAGAACTCATACTAAGGAGCGGCCTTACGTTTGTCGAGCATGTGGAAAAGGATTTCATCATCAAAGTCATATTATTCGACATGAACGTATACACTCTGGGGAAAGGCCATATTCCTGTGATATCTGTCAAAAAACCTTTACACAATTAGGTTCACTGAAGGCGCATAAACAACGTCATCGTGAGattcaaattgatttattagATTATCAATTAGATGAGGATGATCCGTTAGCACTAAATGTGCTGTAG
Protein Sequence: MLFVKIEDNGKYDSLTSKSKWIIRIMSKMLAFLQNVEGNDSRSKNTAEICGTSLKANADPVQNPCPLDVKPKDFICSVCGDGFAGEKQFYGHLQTHTGEIHWKCTQCPESNVGFDSLSRLKIHENACHNIVRPFKCKHCDLLFDRASQRDYHMRSVHFGEKSQICQICGKGFFRRNDLRTHLNIHLGTNLCICEICGRKFNHVSNLIRHCRIHAGVKPYPCSICGKRFTQIGSLARHKRIHSREQDSIKACSIKNQAPFDLKNEVSNKHDLQGVEPSQHKPSKRQHYCKICGESFQFILLLRQHEKHHLHSAEDLECKSCGKTFQKVEEVKEHCCRPLSSCDVKVTENIVKKLSKFIRKTENLNDTADGSHGAETILIQLQDERIKNAATSNISMNEIKEQPIQGQPMIYSGSDQVTNFNSEEAEEIPNEILQEHLMELAGKINTISMAPDRDASINISEILETYNCEDAEFGTDNDIKSKPYEIQNIGVQSDNNFSRENNIIYIQTLGKDGFAILTDHEGIMRNVSLDIVQEANNTNYQPNIENCHSDMSEVQISKSTELPSIATQLSCVLKSFDEKLINQNFNSNGPCAIDSISKLMMSQEKLDCKPLNTETTTKADHYHNLKEKNQFNMDICNSSTLKNCQLKTPEFQDNSDMSLAHGNHECANAEPHYLSSCDDDAVSQPFFSNTSAMESTKNDEQVQNLVNFENIVLNRTDPTLRLVQTETGEQFYELILNDLTDKISNSPNIQSLPEPDKTNSMSTSCDISKNIETMSNDTSKQPSLRLVQMENGQQFFEIVRNDSLELENFTSPLHEPQTLQVNNAENPIEVNINLQPDNNIETNNLKHNENNQYFFVNESQEVNSINALTNDIVTVQHSNLEFVKSDAQSDFQNNDQTNFTDFAKTHFDNSAEHFLELARNVDNGQRTVPEEADRPMPIVRLIQNEDGEQFFELIHDSLQFDKNRHLELQNERMDKNSSANIQDTKTLNDPDCNKSNLLICFRNNLEFRPIINMEANTTKELTGDGNDKSNTINFYIDFNPNNTAATRSIVEEQKQKSKSSIKKFQCSECNKSFSSSYNFKQHIGTHFTDQQKFQCKECGTQFAWKSTLNKHMALYHRPDGPQKFVCEICPKVYNTLSQVNEHVKRDHLKERKHVCHCGKSFFKKFDLKTHGRTHTKERPYVCRACGKGFHHQSHIIRHERIHSGERPYSCDICQKTFTQLGSLKAHKQRHREIQIDLLDYQLDEDDPLALNVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00293926;
90% Identity: iTF_00254534;
80% Identity: iTF_00255268;