Cfil000338.1
Basic Information
- Insect
- Calameuta filum
- Gene Symbol
- Stk17b
- Assembly
- GCA_031763695.1
- Location
- JARPRI010000006.1:422460-433144[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.9 9.6e+03 -3.6 0.1 4 20 261 277 260 278 0.74 2 2 2.5e-08 2.4e-05 24.0 0.0 9 40 586 618 585 623 0.85
Sequence Information
- Coding Sequence
- ATGATCTATCAATCGAGTCATCAAGCACCGACAATGTCTTCTTCGCGAAAAACCTCACCAAGACCACAACACCGCACTCTAACCTCAAAGTCGTCTTCCTCGATGTCAACTAAGGGAAAGCGCGGCGCCGACaggacgacgacgactgcCGAAAAGTGCCGAGGAAGGTGCAGAGTCGAATGGAGTGAAAAACACGTCAAGGAGGGATTGGTGCTTGTACAGGAAGCGCAATTGGCCAGAGTCGTGAAAACTGGACCAATTTCGGAATATTATGAAATCGATCAGAAACCTTTTGCAAGCGGACAGTGGGCCAGGGTGTACAGATGTCGATCGAGATCGACAGGGATTCTGTATGCAGCTAAATACTCATCGAGAAATCGATTCAATTCCGATTGCAGCGCCGAGCTGCGTCACGAAATTGCACTTTTGTCTCTGTGCTCGCAGAGTCCTCGTGTCGTCAGGCTTCACGACGTCTATGAGACACCGAAGGAAATTATACTCGTTATGGAATACGCACCCGGAGGTGATCTGCAGACTCTAATTGACGGGGACCTGGTACCGCTCGAAGGAGACGTCGTTCATTTTGTGAGGCAACTGGTGGAAGGGTTGGCATACCTGCACGAGAGAAATATAGCTCATCTTGATATTAAGgGCCTCCTCAGCGAACACTATGACAAGCATCCCGTGTTTATACTCAAGGATATTAAGTTCAAAGAACTCAAAGCCATGATGGACTACATGTATAAGGGAGAAGTAAATATCTCTCAAGACCAATTGGCAGCGCTCCTCAAGGCCGCCGAGTCCCTGCAAATCAAGGGTCTCTCGGAATGTAAAACGAGCGGCAAtagtggcggcggtggcggtggcgggGGTGGTTGCGGCGGAAGGAGCGAGCCCAGACCACCGAAAGTCGTCTCACAGCCAACGGCGCCGTCGTTGGACATTCCCCACCCGTCTTCCGGTCTCACCATAGAAAAGAACAGCAAAGTTCCTAGGCAAAGTTTGACACAGGTCTCCGTCGGTGATCTGCCAGAAGACTCCGCCAGTCCCCAGCTCCCCAGAGGGCTCTCCTCCAGgGAAGGTTCGCAAAGTCCGACCAatgcgaaaagaaagaaaaggtttCGCGGTAGGAGCCTGGGCGATGACAATTCCGTTGAAAATCACGACGCATCGAATTCGAGTGACATGCCCCAGCAAATGGGGGTCTCGGCACTCGCGATCGCGCCTGTTGCCAATGAAAAGTCACACGCCGACCCCACAGACTCTCTCGGTAGTTCAGTGCTAATGCAACAGCTGGCCAAACCTGCCGACGAGATGCTCCAGATGCCGCTGGAGAATCAACAGCCTAATGATAATTTGATAGAACCAAAGTCAGAGTACCTTGAGGATCCGGAGGAGAGTGTCGAGGATCTAACCCTCGATGACGACATGAACGATTTGAATGAGATGGAACAGGATACCAACAGAGCTGGCCCTTCTCATGAATCCTCCCAGCACCCTGGTGGGGGGGCGGGAGCGCGGGCTCGGTCGAGCGGGATTTTGAGTTATGGTGAAGTtggtggtgatgatggtgACGGTGAGGGTATTAGCGCCTGCGATGGTGCTGAAGGGGCCTTATGGGCCTCCCATTTCCTCGAATGTAAAAAAGGCCCTAACACGAGGCGACCTCGACCGGACGTTGACGTAGGCGCGTTGCTCAAGTCCCTGGCCAATAAGCAGGGTAGAAAATATAGCTTAGACTCGGTTAAGATGTCCCTGGACGCGATTTTGCAGCAGGGCGTTAGCACCACTCAGGCCTCTGAAATGTACGGCATTAATCGCTCGACTCTGcagttttatttgaaaaaattgaacgtcGTAAGAAGACGATGGAGACAACCTAGCAACTGGATGCAGCCTAGTCAGTCTTCGACTTGA
- Protein Sequence
- MIYQSSHQAPTMSSSRKTSPRPQHRTLTSKSSSSMSTKGKRGADRTTTTAEKCRGRCRVEWSEKHVKEGLVLVQEAQLARVVKTGPISEYYEIDQKPFASGQWARVYRCRSRSTGILYAAKYSSRNRFNSDCSAELRHEIALLSLCSQSPRVVRLHDVYETPKEIILVMEYAPGGDLQTLIDGDLVPLEGDVVHFVRQLVEGLAYLHERNIAHLDIKGLLSEHYDKHPVFILKDIKFKELKAMMDYMYKGEVNISQDQLAALLKAAESLQIKGLSECKTSGNSGGGGGGGGGCGGRSEPRPPKVVSQPTAPSLDIPHPSSGLTIEKNSKVPRQSLTQVSVGDLPEDSASPQLPRGLSSREGSQSPTNAKRKKRFRGRSLGDDNSVENHDASNSSDMPQQMGVSALAIAPVANEKSHADPTDSLGSSVLMQQLAKPADEMLQMPLENQQPNDNLIEPKSEYLEDPEESVEDLTLDDDMNDLNEMEQDTNRAGPSHESSQHPGGGAGARARSSGILSYGEVGGDDGDGEGISACDGAEGALWASHFLECKKGPNTRRPRPDVDVGALLKSLANKQGRKYSLDSVKMSLDAILQQGVSTTQASEMYGINRSTLQFYLKKLNVVRRRWRQPSNWMQPSQSST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00252965; iTF_00255004; iTF_00255228;
- 90% Identity
- iTF_00252965; iTF_00255004; iTF_00255228;
- 80% Identity
- iTF_00252965; iTF_00255004; iTF_00255228;