Cfil006120.1
Basic Information
- Insect
- Calameuta filum
- Gene Symbol
- clz9
- Assembly
- GCA_031763695.1
- Location
- JARPRI010000280.1:107313-111703[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.6e-09 5.4e-06 26.0 0.0 1 40 29 67 29 69 0.94
Sequence Information
- Coding Sequence
- ATGGACACTGCGGAGGCAGCTGATCCATCCTTTCCATTCAAAGCTTCAGCGGAAGggaaAAGGACAAATGTTGAACGGGTATACACAAATGCTGATCTCGAGAAAGCCTTAAACGCGGTGAAAACGGGAATGCCTGTAAAGACAGCATCGAATCTTTACAAGATTCCAAAGACGACATTGCTCTACAAAAAGCGTGGTACATTACCACCTGTAATGAAATCTCCTGGACCTGAGTGCATACTTGGCGAAGCAAATGAACGCAAGCTCGTTGAGTGGATTTTGCACATGAGTCGAAGCGGCTTCCATCCAACTCGGGTCCAATTATTGGATAGTGTTCAACTGCTTCTAAAGCATCTAAAGATGAAGACTCAGTTTAAGGGTAATCGCCCTGGGAGACATTGGTACGACGCTTTTAAAAATCGTCACCGAGAAATAGCTGAaagaatttcacaaaatttgaCGCACAATCGAGCTGATTTAAGTGAGAAAAAGCTTCGAGGGTGGTTCAGCGAGGTACAGAAGTATTTTCAGTCGAAGTCACTTCTTGATATTGATGCTTCTCGCGTATTTAATTGCGACGAGTCGGCTTTTTTTCTGAGTCCGAAAGGGGTCTCGGTATTGAccaaaaaaggtgaaaaaacaGTGTGCAATTTCGTCAGTAATGATGAAAAAGAGTGCTTGACTACGCTCATCTGTGGAAGTGCGAGCGGGGAACTCGCGCCACCGATGgtacttttttcttacaaacGGATTCCCGGACATGTCGCTGCACGAATGCCAAAAGACTGGGGCCTCGGTCGCTCGGACAATGGGTGGATGACTGGAGAAACGTTTTTCGAATACGTCGCGAACATTTTTTACCCATGGTTGCTCAAGAATAAAGTTGTGTTCCCAGTCGTACTGTTTCTAGACGGGCATACTTCGCATGTGACCATGGCGTTAAGCGATTTTTCTAGAGAAAAACGCATCGAGCTCGTGGCGCTATACCCAAATGCAAGTCACATCTTACAACCGATTGACGTCgcattttttcatcctctcAAGGGTGTATGGGCGAATGTAGTTCGTCATTGGCGACTAGAAAATAACGGTGAACGTTTAAAGCGAGAAGACTTTGGACCGCTTCTTCAGAAAGCTATCGAAACTCTCGACGTAAAAAGTATTCTCAAAAATGGTTTCAAAACAACTGGGCTCCACCCTTTTTCAGCAGATGTAATTGACTACCAGAAGTTTTTTAAGAACGGCGATAGCTCCGAAAAGAACCCTCCGATGACTCAAACCGAAAGACCTcggtataaagaatttttagagtacgttgaaaataatatcgaaaacGAAGTGCTGGAGATGTTCAGAAACGTCAAAGACGAAGCAGAATGGAGTGGCGACCTGGCACATCGAAGTTTATTCTACTTCTGGCGAAAAATTAAGAACATTAGCATCAACGCCAACGAAGTCAGTCACGTTACTTCAGCCGTAAACGTTGTCCAAGGAGAGTTCCTTCCAGTTGGAGAAGACGAGATTTCGCAAAATCCTTCAACAGTCGACGCAGATTCTCAAACTAGCGATATCACCTTCTACGAGATCGACGCAGCTGGAGCGTTAGCACCGTTGGAAAATGCCAACGAAAGTGCACAAGAAAGGACGAAGCtggtaaaattgcaaaatcatAGCATTTACGAAAATCCGAAAAAGCCGACTTCTCCGAAGCCATCGACCTCAAATTCGCATGTTGATATTCCTCCCGGTATCCCTTCGTCATTCAAGTATGTTCTTCTTTGGCCTCCCAAGGAGGAGCttccgaaaaaaaatcaagcaaaaGATACAGTGCCAGCAGTACTTACATCCGACGAGTGGATAGCTTATGCCAAGGcgaaagataagaaaacaCGTACAGaagtggaggaaaaaaaggcgAGAAAAGAGGAACATTTGAGGAAAGGGCAGATGAAAAAGGAGCAACAAGAGATCGCAAAAACAGCCAgACCAACCTTGATGCGACAGTGGCGCGCTCAGGTGGTCGTTGTTGACACCAACATCGGACAGTCGCGCCTGAGCGTCAGCCACGGCAGCAAGTGTTCTCATCGAGTTTGTTACTGTACTACATCATTGTGA
- Protein Sequence
- MDTAEAADPSFPFKASAEGKRTNVERVYTNADLEKALNAVKTGMPVKTASNLYKIPKTTLLYKKRGTLPPVMKSPGPECILGEANERKLVEWILHMSRSGFHPTRVQLLDSVQLLLKHLKMKTQFKGNRPGRHWYDAFKNRHREIAERISQNLTHNRADLSEKKLRGWFSEVQKYFQSKSLLDIDASRVFNCDESAFFLSPKGVSVLTKKGEKTVCNFVSNDEKECLTTLICGSASGELAPPMVLFSYKRIPGHVAARMPKDWGLGRSDNGWMTGETFFEYVANIFYPWLLKNKVVFPVVLFLDGHTSHVTMALSDFSREKRIELVALYPNASHILQPIDVAFFHPLKGVWANVVRHWRLENNGERLKREDFGPLLQKAIETLDVKSILKNGFKTTGLHPFSADVIDYQKFFKNGDSSEKNPPMTQTERPRYKEFLEYVENNIENEVLEMFRNVKDEAEWSGDLAHRSLFYFWRKIKNISINANEVSHVTSAVNVVQGEFLPVGEDEISQNPSTVDADSQTSDITFYEIDAAGALAPLENANESAQERTKLVKLQNHSIYENPKKPTSPKPSTSNSHVDIPPGIPSSFKYVLLWPPKEELPKKNQAKDTVPAVLTSDEWIAYAKAKDKKTRTEVEEKKARKEEHLRKGQMKKEQQEIAKTARPTLMRQWRAQVVVVDTNIGQSRLSVSHGSKCSHRVCYCTTSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00253488;
- 90% Identity
- iTF_00255003;
- 80% Identity
- iTF_00255003;