Basic Information

Insect: Calameuta filiformis
Gene Symbol: zfh1
Assembly: GCA_030142265.1
Location: JARQSU010000748.1:14459-18605[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.028 2.1 9.1 1.0 2 23 85 107 85 107 0.92

2 7 2.7e-05 0.002 18.6 0.6 2 23 126 147 125 147 0.97

3 7 6.4e-06 0.00048 20.5 7.8 1 23 156 178 156 178 0.99

4 7 1.6e-05 0.0012 19.3 1.9 1 21 184 204 184 205 0.95

5 7 9.9e-05 0.0075 16.8 4.2 1 23 655 677 655 677 0.94

6 7 3.7e-05 0.0028 18.1 7.2 1 23 683 705 683 705 0.98

7 7 0.0052 0.39 11.4 4.6 1 21 711 731 711 732 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.028	2.1	9.1	1.0	2	23	85	107	85	107	0.92
2	7	2.7e-05	0.002	18.6	0.6	2	23	126	147	125	147	0.97
3	7	6.4e-06	0.00048	20.5	7.8	1	23	156	178	156	178	0.99
4	7	1.6e-05	0.0012	19.3	1.9	1	21	184	204	184	205	0.95
5	7	9.9e-05	0.0075	16.8	4.2	1	23	655	677	655	677	0.94
6	7	3.7e-05	0.0028	18.1	7.2	1	23	683	705	683	705	0.98
7	7	0.0052	0.39	11.4	4.6	1	21	711	731	711	732	0.96

Sequence Information

Coding Sequence: ATGTCTTACGCAAGACTATCGACGTATCCTCCCTCTTATGCAAATGACCCCAAGTCCCAGATAGTCCTAGGCTATGAGGTTGCCGTACTGAAATCAGTACCAAGTAGCGCCGACGTGTCTGGCTCCAGGGATTCCGGGTGCAGCGAGGACGAGACAGGTGCCGATGCAGAGGTGGCTggtggcggtggaggtggcggaggtggtggaggcgGCGGCGGAGACGGAGATGGGGCATCGGCCAAGCAGGGAGAACGATGCCCCCAGTGTGGCATCCTCTGTCGAAACTTGCACGCCCTGCAGCTCCATCTCGAAGACATCCACAAGACGTCCTACTCCATCGACAAGCACGACCTAGGCGCTCAGTTCTCCCAAGTCTCGTGCAAGGTCTGCAGCAAAACTTTCGCCAACGTGTACAGATTGCAGAGGCACATGATCAGCCACGACGAGAGCGCCGTACTCAGGAAATTTAAATGTCCCCACTGCGAAAAGGCCTTCAAATTCAAACATCACCTTAAGGAACACCTACGCATTCACAGCGGAGAAAAGCCATTCCAATGCAACAATTGCGGTAAACGATTTTCCCATTCGGGTTCCTACTCGAGTCATATGACTTCGAAAAAGTGCTTGATAGTTAACCTGAAGAAGTCCAGGCAAAGCGCAATTGGCAACGTCGACAGGGCAGCCAAGAAGTCCCAGCAGCCATTGCAATCTCGTCGTGACGTTGATCTCCTAGTGGCGAACAATAATACTTTTCTCCCTATTCTACCGAAACTGTCTCCCTCCGACTATCAAGATCTTCAGCAAAACGGCGGAGGAATCTACGATATGCCGACTCTACTACCTCAGATGATAGGATTCTCAAGCTACTTCCTGCAGTCCTCCCTGGGAAAGATTCTAAATCAACTGCAGTCGAAGAGACGCGACGAAGTGGCTGAACAGTTTGAAACAAAGCGCGAAACAATGAGTCCCTCGACGGCGGATTCCGAAGGTACAGAAGGAACGGAAGGGAAGGAGTCACCGGGCCCAGCAGACTCGCAAGGCCTGGACGGGGTCCGTCGTATCCTGGAAACCGTAAACACTACGGTGACCAAGCAATTGCTCGAGGCCAACGTGAGAAAGTTGGCTTCGTCGCCGGCGACGATAAAGCGAGAATACGACGAGGATTATCAGGATCAGGATAGCGAAATGTCTAGCGAAGTGACGCACTATCCGGACTGGCCGGCGACGGATCAATACGATTCGCAGAGCGAAGGTCTAGCCGCGAAACTTGAGGACGCCAATCAGACGCCGATGCCCGGCAGGAAGAGTTGCAAGAGAAAGGCGGATCTGGAAACGATGGTAGAGACCTCCGAGGCGGATACcgatgacgaggacgagggTAGCCAATTGCAAGGTGACTCTGGAAGAAAAGTTAGGGCCAGGTCGCTAATTGATGACGCCCAATTAGCTGTTCTCAAGGGTTACTACGCGATCAATCCTCGTCCTAAAAAGGAAGAGATTACCATGATTGCTAATTACATTAACTTTCCTACACGTGTCGTTCAGGTCTggtttcaaaattcccgcgcAAGGGACCGCAGAGAATCAAGGATGCCAGCTCTGGTACCCTTACCGATCTCTGGGTGTCAGACGATCGTCGAACAGCCACTGGATCTTTCAAAAAAGGAGCTGAGTATCTCGGTGGTCAAGGACAGTGATACCTCTAGTAGAAACACTGCCTCTCCCTTTGGTCCGAAGGAGGACAATCCGGTACTGCCAATACCGGAAGCCGATGACCTTGAAGACTCTCCCTTGGTCATTGACGAAGAGACGACTGATTCTGTGGAAACTAAGCAGCAGCCTGCTGCTGGCGACGTTGCTGTCAAGTCGCAGAGTCAGTCACAGACCCAAATAAAGAACGAGAGCGATGCAGTAGCTCGTGCCGATGCCCCGTCCGCAGTGGAAGCCGAACAGGAAGGCCTCTACTTTTGCGACCAGTGCGACAAGACGTTTTCGAAGCACAGCTCTCTCGCGAGACATAAATATGAACATTCCGGGCAAAGGCCGTACAAGTGCGTGGAGTGCCCGAAGGCGTTCAAGCACAAGCATCACCTGACTGAACACAAACGGCTGCACAGTGGCGAAAAGCCTTTCCAGTGCCGCAAGTGCCTCAAGCGCTTTTCTCACTCCGGCTCCTACAGCCAGCACATGAACCACCGTTACTCGTACTGCAAACCCTACAGAGAATAG
Protein Sequence: MSYARLSTYPPSYANDPKSQIVLGYEVAVLKSVPSSADVSGSRDSGCSEDETGADAEVAGGGGGGGGGGGGGGDGDGASAKQGERCPQCGILCRNLHALQLHLEDIHKTSYSIDKHDLGAQFSQVSCKVCSKTFANVYRLQRHMISHDESAVLRKFKCPHCEKAFKFKHHLKEHLRIHSGEKPFQCNNCGKRFSHSGSYSSHMTSKKCLIVNLKKSRQSAIGNVDRAAKKSQQPLQSRRDVDLLVANNNTFLPILPKLSPSDYQDLQQNGGGIYDMPTLLPQMIGFSSYFLQSSLGKILNQLQSKRRDEVAEQFETKRETMSPSTADSEGTEGTEGKESPGPADSQGLDGVRRILETVNTTVTKQLLEANVRKLASSPATIKREYDEDYQDQDSEMSSEVTHYPDWPATDQYDSQSEGLAAKLEDANQTPMPGRKSCKRKADLETMVETSEADTDDEDEGSQLQGDSGRKVRARSLIDDAQLAVLKGYYAINPRPKKEEITMIANYINFPTRVVQVWFQNSRARDRRESRMPALVPLPISGCQTIVEQPLDLSKKELSISVVKDSDTSSRNTASPFGPKEDNPVLPIPEADDLEDSPLVIDEETTDSVETKQQPAAGDVAVKSQSQSQTQIKNESDAVARADAPSAVEAEQEGLYFCDQCDKTFSKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCRKCLKRFSHSGSYSQHMNHRYSYCKPYRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01198565;
90% Identity: iTF_01198565;
80% Identity: iTF_00251961;