Basic Information

Insect: Calameuta filiformis
Gene Symbol: Bcl11a
Assembly: GCA_030142265.1
Location: JARQSU010000352.1:3015609-3026889[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.014 1 10.0 0.1 2 23 158 180 157 180 0.95

2 6 1.5e-07 1.2e-05 25.6 1.7 1 23 459 481 459 481 0.99

3 6 0.00042 0.032 14.8 0.3 2 23 499 521 498 521 0.97

4 6 1.2e-07 9.3e-06 25.9 2.9 2 23 720 741 719 741 0.97

5 6 8.9e-06 0.00066 20.1 3.3 1 23 747 769 747 769 0.99

6 6 4e-05 0.003 18.0 0.4 1 22 777 798 777 798 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.014	1	10.0	0.1	2	23	158	180	157	180	0.95
2	6	1.5e-07	1.2e-05	25.6	1.7	1	23	459	481	459	481	0.99
3	6	0.00042	0.032	14.8	0.3	2	23	499	521	498	521	0.97
4	6	1.2e-07	9.3e-06	25.9	2.9	2	23	720	741	719	741	0.97
5	6	8.9e-06	0.00066	20.1	3.3	1	23	747	769	747	769	0.99
6	6	4e-05	0.003	18.0	0.4	1	22	777	798	777	798	0.97

Sequence Information

Coding Sequence: ATGTCACAGAAAGCGGAGACGTCGCAGGGCACCACTCAAGACACCGTCCAATGCGGGGGCTGCCGCGCGTCCTACCCCCTCGCCGAGATTGTGCGATTTATCGAGCACAAGGTCAACCACTGTCGCAGCACACTTCAGGGCTGTCACAGTCCGTCCCCAGCTGCTGCCCCGGAGGACTCCGACCCCGAGGACGCCCTGGCGCTCAAAGCGGAacaggaaaaattgaattcggTACCCAGTATCTCGGCGCCTATCAATAAAAGGGGCACCAGGGTCGAGAGTCCACCCACTCCTCAGGGATCAGCTCAGGACAGTGGCGGAAGTCCCATTGAACTCAGGGCCAGCGCCAGTTCCACCCCCAAGAGACGGCTGGAGGCTCCCGAGGAGGACAAAGAGGAATTGCCGAAGAAACGTAAAACGGAATCCGTCGATGCAGATACCAATACCGTTAATTCCAAACCAAGATGGCTGCAGTGCTCGCAGTGCTCCCGTCGACTCTCCTCCGCCTGGGAACTCCTGCAGCACGCGCAGAGCGTCCACGGGGCGAGGCTCTACACGTCCTCGTCATCCTCGGCGAACTCCTCCTCGAACGCGCCGGCACTGAGTCCACCTACCCCCACGCCGACCCACACTCACCACCTCAGTCCACCCAATCACCTGAACCTCAGTGGGAAGTCGACCGGAAGTTCCTCGGCCGCAAATTCTTCCGGCGGTACCAATTCCAGCGGTAGCAGCGGAGGTCGACAGCTACAGTCTTCGGCGTCCCTGGTTGCGGATCCTCTTCAAAGCTTTCTGAGGATGCCTCAGCACCTAGAGAGGAGCTTTCCACCCATGTTTAGGCCTGACTTCCTGGCGCTGAACTCGCTGGCTGGGTACAGGGGACTTCCGGATCTTCAAACGGCTACCAGAAACCTACAGAACCTCGGTGATCCTCTACGGGGTATGGACGGTGTTAATCTGGGCGATCCTCTCGTCAGGAGCTCCCTGGATTCCTTCAACAACGCGAGGAATCTTGCGAATCTGGCTGAACTCTCTCATGGGAGAGTTTTGGCTGCACAAGGTCATCCACCACCTCTAGAAGCCAACCTGGATTTTTACTCGGCGCGCCTAAGGAGCCTCGCTAACCCGTCCTTAGGCGCGGCTCCGAATCCACCCTCCAACCCAGCCCCCGTAGTCAGCGTACCTCATTCCATAGAGCCACCAAGTCCAGCAGCCAATCCTACCAACCTAACCCACTCGCATCAGAAGGAGAACTCGCCGCCATGTTATACGCAAAGTCCTATTGGGcatcacaataataataattcaacagaCTCTGAAAAAACGAGTCCACCAGTGGCCTCGACTCCCATCATCACCGACAGCGAGACCGTGTACACCTGCGAAGTCTGCGACAAGAAGTTCAGGTTTCAGTCTAACCTCATCGTTCACCGTAGAAGTCACCAGGACAAGGAGAGGGCCTTCCAGGAGACGATGCAGGACGGCACGGCCACTAGGTGCGAGGTCTGCGAGCTGGAGGTAGCAAACTTTTCCGAGCTTAGGAAACACATGAGGAAGGAGCACCAGGAGAGTCTGAACGTGGCTTCGAGTCCTCAGGGTAGCGTCGAGACGGTACCCGACGATGGTAGCAGCTGCGACGAGAACATAGACCTGGACGAGGCCGAGGACAAGGTCAGAGAAGATACGGAGGAGAATACACCGGAAGACCTTAGTACGACCCAGGGTCAAAGTAGCGAGGAGAGCGGAGGTCGGGTTGATCAGAAGCCAAGTCTGGTCGGGGACCTCATGGAAAAATTTGGTCTGAGCAACATAGCCCAATATTCGGAAGCCTACAGGCAGGCGCTCCAAGAGAATCATAGGGGTGCCTTCATAAAGGCAGAGTCCACATCAAACCTAACAAACTCCCTGAACAACAACAAAGAAAAGGACAGCGCCCTCTCGCCGACCAACTTCAACTCCTCCTCGACCCCCAACATATTCTCGGGTCAGGGCTTCCCGAGGAGTACCGGACCGGACTTTGGTGGTCTCTGGTTACCGAGTCCGCACTACCTGGAGAACAACGAGTTCCGGAAGGCGTCCAAGGCCACGACCTCAAGTCTGTCCCTTCAGGGTCTGCCGAGTCCACTACTGAAGAAGGAACGAAGCGGTAGGAACGACACCTGCGAGTACTGCGGCAAGGTCTTCAAGAACTGCTCCAACCTGACGGTCCACAGGAGGTCCCACACGGGCGAGAAGCCCTACAAGTGCGAGCTCTGCTCCTACGCATGCGCACAGAGCTCAAAGCTGACGAGACACATGAAGACCCACGGCAGACACGGCAAGGACACCTACAAGTGTCGCTTCTGCGAGATGCCCTTCTCGGTACCCAGCACCCTGGAGAAGCACATGCGCAAGTGCGTCGTAGTGGTCCAGCAGGGTCCTAAATTGGGTATGCCCTATCCTGGGAGCCAGGACGAGGACTCGTCTCTCAGTACCAAGGACACTTGA
Protein Sequence: MSQKAETSQGTTQDTVQCGGCRASYPLAEIVRFIEHKVNHCRSTLQGCHSPSPAAAPEDSDPEDALALKAEQEKLNSVPSISAPINKRGTRVESPPTPQGSAQDSGGSPIELRASASSTPKRRLEAPEEDKEELPKKRKTESVDADTNTVNSKPRWLQCSQCSRRLSSAWELLQHAQSVHGARLYTSSSSSANSSSNAPALSPPTPTPTHTHHLSPPNHLNLSGKSTGSSSAANSSGGTNSSGSSGGRQLQSSASLVADPLQSFLRMPQHLERSFPPMFRPDFLALNSLAGYRGLPDLQTATRNLQNLGDPLRGMDGVNLGDPLVRSSLDSFNNARNLANLAELSHGRVLAAQGHPPPLEANLDFYSARLRSLANPSLGAAPNPPSNPAPVVSVPHSIEPPSPAANPTNLTHSHQKENSPPCYTQSPIGHHNNNNSTDSEKTSPPVASTPIITDSETVYTCEVCDKKFRFQSNLIVHRRSHQDKERAFQETMQDGTATRCEVCELEVANFSELRKHMRKEHQESLNVASSPQGSVETVPDDGSSCDENIDLDEAEDKVREDTEENTPEDLSTTQGQSSEESGGRVDQKPSLVGDLMEKFGLSNIAQYSEAYRQALQENHRGAFIKAESTSNLTNSLNNNKEKDSALSPTNFNSSSTPNIFSGQGFPRSTGPDFGGLWLPSPHYLENNEFRKASKATTSSLSLQGLPSPLLKKERSGRNDTCEYCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRHGKDTYKCRFCEMPFSVPSTLEKHMRKCVVVVQQGPKLGMPYPGSQDEDSSLSTKDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01454407;
90% Identity: iTF_00295530;
80% Identity: iTF_00254605;