Basic Information

Insect: Calameuta filiformis
Gene Symbol: -
Assembly: GCA_030142265.1
Location: JARQSU010000744.1:562377-566462[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.12 8.7 7.1 1.2 1 23 332 354 332 354 0.97

2 20 0.92 69 4.3 0.4 1 19 361 379 361 379 0.97

3 20 0.0054 0.4 11.3 1.5 1 23 403 425 403 425 0.98

4 20 0.015 1.2 9.9 0.4 1 20 479 498 479 500 0.94

5 20 0.034 2.6 8.8 7.1 1 23 512 535 512 535 0.98

6 20 0.04 3 8.6 1.9 1 23 540 562 540 562 0.97

7 20 0.0008 0.06 13.9 0.9 1 23 598 620 598 620 0.97

8 20 0.00055 0.041 14.4 0.1 1 23 626 648 626 648 0.98

9 20 3.8e-05 0.0029 18.1 0.6 1 23 686 709 686 709 0.96

10 20 0.0029 0.22 12.1 1.1 1 23 715 738 715 738 0.89

11 20 0.15 11 6.8 0.1 1 23 745 768 745 768 0.92

12 20 0.00051 0.038 14.6 0.1 2 23 777 798 776 798 0.91

13 20 0.13 9.9 7.0 2.8 1 23 848 871 848 872 0.94

14 20 0.04 3 8.6 1.9 2 21 887 906 886 908 0.93

15 20 0.00012 0.0092 16.5 1.7 1 23 922 944 922 944 0.98

16 20 0.0033 0.25 12.0 0.2 1 19 966 984 966 986 0.96

17 20 0.093 6.9 7.4 0.2 3 23 1042 1063 1040 1063 0.90

18 20 0.11 8.3 7.2 0.4 3 23 1090 1111 1089 1111 0.89

19 20 0.12 8.6 7.1 0.9 3 23 1145 1166 1144 1166 0.91

20 20 0.0097 0.73 10.5 0.7 2 23 1196 1218 1195 1218 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.12	8.7	7.1	1.2	1	23	332	354	332	354	0.97
2	20	0.92	69	4.3	0.4	1	19	361	379	361	379	0.97
3	20	0.0054	0.4	11.3	1.5	1	23	403	425	403	425	0.98
4	20	0.015	1.2	9.9	0.4	1	20	479	498	479	500	0.94
5	20	0.034	2.6	8.8	7.1	1	23	512	535	512	535	0.98
6	20	0.04	3	8.6	1.9	1	23	540	562	540	562	0.97
7	20	0.0008	0.06	13.9	0.9	1	23	598	620	598	620	0.97
8	20	0.00055	0.041	14.4	0.1	1	23	626	648	626	648	0.98
9	20	3.8e-05	0.0029	18.1	0.6	1	23	686	709	686	709	0.96
10	20	0.0029	0.22	12.1	1.1	1	23	715	738	715	738	0.89
11	20	0.15	11	6.8	0.1	1	23	745	768	745	768	0.92
12	20	0.00051	0.038	14.6	0.1	2	23	777	798	776	798	0.91
13	20	0.13	9.9	7.0	2.8	1	23	848	871	848	872	0.94
14	20	0.04	3	8.6	1.9	2	21	887	906	886	908	0.93
15	20	0.00012	0.0092	16.5	1.7	1	23	922	944	922	944	0.98
16	20	0.0033	0.25	12.0	0.2	1	19	966	984	966	986	0.96
17	20	0.093	6.9	7.4	0.2	3	23	1042	1063	1040	1063	0.90
18	20	0.11	8.3	7.2	0.4	3	23	1090	1111	1089	1111	0.89
19	20	0.12	8.6	7.1	0.9	3	23	1145	1166	1144	1166	0.91
20	20	0.0097	0.73	10.5	0.7	2	23	1196	1218	1195	1218	0.94

Sequence Information

Coding Sequence: ATGGACGAGCTGGAGGAATTGCGGAATGTCGAGGATTTGTGCAGATTATGTCTCTCTGTTGATCAGCCAAAGTCCTCTGTATTTCATGGGGAAGACTCTTCCGTTTCGCTTGCTACTAAGATAGAGGCATGCCTCTCGATCGAGATTTCTCAAGGCGACAAGCTCTCTACCACAATATGCACAGAGTGCGTGACGAAGGTCAACCAGTGGCATGCTTACAAAGAATCCTGTCTACGGTCCCAGGATAAGCTACAGGAGTGGTTGGCAAGACAGACTTCTTCAGAATTATTGGGAAATGCTGTAAAAAAAGAGCCTGTGGAATTGGACTATAATGGGGAGGACGATGTGATCTTGACTGAATGCATTGAACCCGGTGAAAAAGATTCCAGCAACCCACGAATATCATGCACGAACGTTCAGGAACATTCTGaggagaaaaatagtaaagacGTCAATGAAGAGTCACAGTGTACCGAGTTGTTAAAAAACATAGTAAATGCAGAAGTTTCGGGTAGCTCCTCAAAAGAACCAGTTCACGAGGAGCAGCTTCCGATAAAAGCGATCAAGAAAGAACCATTATCAAATCATGAAAATGATACCAACGTCGAAGTGGCGCCGGTGCCAGGTGGAGAGCTGCTTCTCAATCCTTTAGccgtaaacaaaaataaaccaGACATGGTAATGGAGGCCGATTCAACCCAGAAATCAACCTCAGCAGTAGTCCctgtcaaaagaaaaATCCATCTACATTCAAAATTCACGTACGCGAAACACAtggcaaaatttcattcggacGCAGATAATACTCAAGAAAATCAAAACGCAGAAGCGCCAAAGAAGGCGAAGTCGCCACCGCCTCGAAAGACAAAAGCTATAACCGAAGTATCAGAAGTTGAAGAGATGATCGAGGACGTGGAGGAAGAAATAGACATCATGGATCAGAACTCTTCCCTTTCGCAAGTTCAGCAAAGCATAATCAGTCAATTGAAGACATTTTCGTGTTACTCCTGTCAGCTTTCATTTCCGGATCGTCGCAGTACATTGTATCATATTCGAGAACACATGCCTGACCTACGACCTTACACTTGTGTGGCATGCCTAACTGAATTTTCAGACAGGTCCACTTACCAGTCTCATTGTGGTGGGTCTGTCGAGTGTGCCATGAAGATAGCACTCGTAGTGCCCACAATGGGTATCGAGAAGCTTTTCACATGTAACATGTGCCTGCGGTCATTGAACAATCGCAAAGAATTGCTCAGTCATTTGTCCAAACATTCTGACAAGCAGTACGCAAAATTGACGACGTCAATGAGCGTCCCTCCCAAACTTAAACCCATAACCTTAATGACGTCGGAGGAGACCAATAACGTGTCCGACGATCATATCTACGCTACCATGCCTCACCCATATAAAAATGGCGACCCTGCGTTCAATCACGAGTGCAACTTCTGCGGGatgatatatagatacaagCCAAACATGTTGAAGCACCGTGATATATGTAAAAAACTTCCGCCGGATGCTCGTACCGTCTACAAGTGCGTCCATTGCGGCATGACCTTCAGGGTCTTCAAGAAGTTTCACTCCCATACAAGAGTGAAGCACAAGAAGAGGGAATTCGTTTGTTCAAAGTGCTATGGGAAGTTTCGATCGCCACGTGAATACCTGGCTCATCATGAGAGTCATACAAAGGTTACGTCAAAGAATGAGAGGTACCTGGTAAAGGAGAACGGAGAAGACATGATCCTGAATAACGAAGAGATTCGCTTGTCCAGGATCAGTGAGAAAAAGTATAACTGCGGACTGTGCAACATGGATTTTGGAAGCAGATCTGAGCTAACGAAGCACAAGAACCAGCATCTGAAAGTGAAAATCTACTCGTGCGTCATCTGCAGGAGCATGTTCAGCAGTGCAGGTGCCCTGGAGATACACATGAAGGAACATGGGATCGAGGATCCCAATGAGAGAAAAGCAAACAGTTCCTGCGTAGAGTACAGAACTCCTGGGGATGGTGAGCATAGTTCAGGTCACGGTACAAATTCCAGTGACACCAGGTTCAACTGTGACAGCTGCATAAAGAGTTTCTCCAACCTGGCGAACCTGCGACGTCACATCAGGAGCGCGCACACGTCCAACGAGGTCTTCAAGTGTCCTGATTGTTCAAAGTTCTTCAAGGATAAAACCATTTACGAGCAGCATGCCAAAGCTGAGCACAAGTCTTCAAGGCCGTCGTATCAGTGTATAATGTGCAGCAAGATCTTCGCTCTACACGCTAACCTCGCCCTGCACATCGTGAACGTCCACGAGAACAAACTGGGCACGAGGTTGCAGTGCGACATTTGTGGTAAGAGATTCGTTGAGGAGACATCCTTGCGGATTCATAAAGGCTGGCACGCAAGGGCCAATTGTCGTCTGAACGCTGACAAGTTTCCAGATGACGCTAAGAGGGTGAAGATCGAATCTGGCCCTGTGGACTCGGCGAAGCCGGCCAGAGCCAGAAAGTCCTTGCCAAGTGTGCCAACTGCTAGGCAGTTGCATCAATTTCAGTGTTACGTTTGTCATGAAAATTTCAGGGAGATTAATCGCCTCAAGGTGCATCTTCAGGATGTTCACCACGCGGACGGCAAGGACGAGAAGAGTCAGGTGAACAAGGAGTTGCACTGTGAACTCTGCGCCAATGTGTTCCCGGACAACGACAGCTTGCAGAAGCACATCAAGTGTCACAACGAGAATCCGTTCCCCAGTGCGCAGAAACGTAAGAATTTCCAGTGCGACGTTTGCGGCAAGTATTACACCCTGAAGAAGAGTCTGGCGCGTCACAAGAAGCTTCACAAGGCTACAGCCGGGGTGTCCTTGAAGTTTCAGTCTCTAGCGAGAAAGCAAATGGCTGCCATGTATCAGTGCCCAGCGTGTCGCAAGGTCTTCGACACCTACATGGGTCTGCAGAGGCACAAAGTCTGTCACGGGTCAGAGCCGAGTACACAGAAATCCTCCCAGTCGGTCCGAGCCACGAGAACGTCGGTCAATATGGAGCAGGAGGACCTGAGGAATCCAAAAATCGAATTGGACGATTCACCGGAAGTCGATTCCCTCGAGAACGTTGCCGCCAAGAAACCCCTGACCTGCATACTCTGCAAAAAGGTCTTCGCCGGCATGAGTATGCTCCTTAAGCACAAGCAGGTCGCTCACAACATCCGTTACAATAGACAGTCCAAGCAGCCTAAAGTCGAGTTCATACCGATTCTACAGCGAAGCGGTCGGGTCGCCTGTAATCTTTGCTCCAAGGAATTTCCAACGTTGCCAAGACTCAAGCAACACTTCACTCTGATTCACAAGTCCGAGCACAGCGGCTGCACGGCTCATTGCTGCGACCCTGCGAACGCTACTGTCtcaaaaacgaagaagaaggtcCACGGCGGCCTCGTGGTCTTCTGTAAGCTGTGCGAGAAGCACTTCGATAACAAACCCGACGTGCTGGATCATCTTATTGGGAAGCACAGATGCGGAGGCGATTTCGACAAGCAGGATAAATTCTTTTCCATGCTGAACTTGGACAGCTACGTGGTGAACGGCGCGAACGGCACCGTCTGTCCCACTTGCAATATCAAATATCCAAATTTGAGATcactcaaaattcattatttcaaatttcacgaTTGCTTATGA
Protein Sequence: MDELEELRNVEDLCRLCLSVDQPKSSVFHGEDSSVSLATKIEACLSIEISQGDKLSTTICTECVTKVNQWHAYKESCLRSQDKLQEWLARQTSSELLGNAVKKEPVELDYNGEDDVILTECIEPGEKDSSNPRISCTNVQEHSEEKNSKDVNEESQCTELLKNIVNAEVSGSSSKEPVHEEQLPIKAIKKEPLSNHENDTNVEVAPVPGGELLLNPLAVNKNKPDMVMEADSTQKSTSAVVPVKRKIHLHSKFTYAKHMAKFHSDADNTQENQNAEAPKKAKSPPPRKTKAITEVSEVEEMIEDVEEEIDIMDQNSSLSQVQQSIISQLKTFSCYSCQLSFPDRRSTLYHIREHMPDLRPYTCVACLTEFSDRSTYQSHCGGSVECAMKIALVVPTMGIEKLFTCNMCLRSLNNRKELLSHLSKHSDKQYAKLTTSMSVPPKLKPITLMTSEETNNVSDDHIYATMPHPYKNGDPAFNHECNFCGMIYRYKPNMLKHRDICKKLPPDARTVYKCVHCGMTFRVFKKFHSHTRVKHKKREFVCSKCYGKFRSPREYLAHHESHTKVTSKNERYLVKENGEDMILNNEEIRLSRISEKKYNCGLCNMDFGSRSELTKHKNQHLKVKIYSCVICRSMFSSAGALEIHMKEHGIEDPNERKANSSCVEYRTPGDGEHSSGHGTNSSDTRFNCDSCIKSFSNLANLRRHIRSAHTSNEVFKCPDCSKFFKDKTIYEQHAKAEHKSSRPSYQCIMCSKIFALHANLALHIVNVHENKLGTRLQCDICGKRFVEETSLRIHKGWHARANCRLNADKFPDDAKRVKIESGPVDSAKPARARKSLPSVPTARQLHQFQCYVCHENFREINRLKVHLQDVHHADGKDEKSQVNKELHCELCANVFPDNDSLQKHIKCHNENPFPSAQKRKNFQCDVCGKYYTLKKSLARHKKLHKATAGVSLKFQSLARKQMAAMYQCPACRKVFDTYMGLQRHKVCHGSEPSTQKSSQSVRATRTSVNMEQEDLRNPKIELDDSPEVDSLENVAAKKPLTCILCKKVFAGMSMLLKHKQVAHNIRYNRQSKQPKVEFIPILQRSGRVACNLCSKEFPTLPRLKQHFTLIHKSEHSGCTAHCCDPANATVSKTKKKVHGGLVVFCKLCEKHFDNKPDVLDHLIGKHRCGGDFDKQDKFFSMLNLDSYVVNGANGTVCPTCNIKYPNLRSLKIHYFKFHDCL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01474139;
90% Identity: iTF_00253778;
80% Identity: -