Cfil008299.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Calameuta filiformis
Gene Symbol
ZNF236
Assembly
GCA_030142265.1
Location
JARQSU010000445.1:3794877-3810840[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 8.9e-05 0.0066 16.9 1.4 2 23 179 200 178 200 0.96
2 28 4.3e-05 0.0032 17.9 0.6 1 23 206 228 206 228 0.98
3 28 8.6e-06 0.00064 20.1 0.3 2 23 234 255 234 255 0.97
4 28 0.0087 0.65 10.7 0.2 3 23 263 283 261 283 0.96
5 28 8.4e-05 0.0063 17.0 1.0 2 23 294 315 294 315 0.98
6 28 7.6e-07 5.7e-05 23.4 1.3 1 23 336 358 336 358 0.99
7 28 2.7e-05 0.002 18.6 0.7 1 20 364 383 364 386 0.94
8 28 0.00025 0.019 15.5 0.2 3 23 394 415 393 415 0.97
9 28 0.00052 0.039 14.5 3.7 1 23 424 447 424 447 0.98
10 28 2.9e-07 2.2e-05 24.7 2.8 1 23 565 587 565 587 0.99
11 28 0.00061 0.046 14.3 3.8 1 23 593 615 593 615 0.99
12 28 0.71 53 4.7 4.8 1 23 621 643 621 643 0.98
13 28 2.8e-05 0.0021 18.5 1.7 1 23 647 669 647 669 0.98
14 28 0.0004 0.03 14.9 3.6 1 23 724 746 724 746 0.98
15 28 5.3e-05 0.004 17.6 5.0 1 23 752 774 752 774 0.99
16 28 3.8e-05 0.0028 18.1 2.4 1 23 780 802 780 802 0.97
17 28 0.00012 0.0093 16.5 7.2 1 23 808 830 808 830 0.98
18 28 1.4e-06 0.00011 22.6 4.1 1 23 1152 1174 1152 1174 0.99
19 28 0.065 4.9 7.9 0.8 2 23 1198 1219 1197 1219 0.97
20 28 9.5e-05 0.0071 16.8 2.9 1 23 1225 1247 1225 1247 0.99
21 28 1.8e-05 0.0013 19.1 3.4 2 23 1254 1275 1253 1275 0.97
22 28 6.4e-07 4.8e-05 23.7 1.6 2 23 1349 1370 1348 1370 0.98
23 28 0.038 2.9 8.6 5.2 1 23 1376 1398 1376 1398 0.96
24 28 0.00016 0.012 16.1 1.6 1 23 1404 1426 1404 1426 0.98
25 28 0.0023 0.17 12.5 3.0 1 23 1432 1454 1432 1454 0.98
26 28 0.00029 0.022 15.3 1.9 2 23 1660 1681 1659 1681 0.97
27 28 2.9e-05 0.0022 18.5 4.0 1 23 1687 1709 1687 1709 0.98
28 28 2.1e-05 0.0015 18.9 6.6 1 23 1715 1738 1715 1738 0.96

Sequence Information

Coding Sequence
ATGTTGACGCAGCATACTGTTGTCACAGAGTCTGTGGCCTCTGCCATTGACACACTACCTTTgggatttattatttctgaCGATGGACATACACTATTAGCAGTAACTGAAAGAGATGATGGTGCCGTGGAATTCATGACAGTTCCAGTGGCTTTTATACATCAGAACCATACTGCAGTACAATCTACactaaaaggaaataatgaaaattcaatttttcaaattagttTGGATGGTGATGTTACTACGGGAATCCAGCATTCTACATTTGTACCTACACAGCCTTCTCAACCATTACCTATTATTACAAATGAGATGCAAGTATctgaaactgaaaaaaaaaatgaaatagaaactAACGTGGAACAATATGGTATTCCAAGTTCATTAGATTTGGAAAATCCAATTTCAAATAAGTCACAAGGAAATGTTGGATCCGAATCTCAAATTCCTATTGAAAAACCAGTTGTAAAGAGATGTCCCGGTCGGCCAAGAAAAGATGAGACTATACTTTCTATTAAATCAAATAACTTGCAATGTGAAATTTGTGGTCAAGAATTTACTCGGCAAATGTTGTATAAAAAGCATATCGAACATCATGCTGAAGAAAAGCCACATCGTTGCCCAAAGTGTCCTGCTTCTTTTAATGTCCCTACGAATTTCACGCTTCATATGGCCACACACAACACTGGGGAGCCAAAGTGTCCTGAATGTGGTAGAAAGTTTGCCAGAATGGCAAGCCTGAAATCACATATGCTGCTACATGAAAAGGAGGAGAACCTCTTCTGTACTGAATGCGAGGATGCATTTTCTACAAAAgCACAGCTTGATGCACATTTGAAACTACACAATGAAAAGTGGTCAACGGAGGATGTGCGAAAGTGCAAGCTTTGCAATAAACAATTTACCCAGCCAGCTCTCTATCGACTTCACATACGAGAGCATTACAGGCTGCAAACCAAGATAGTGAAACACACAAAAAGAGGAACGAAGCACAAAACTATGTATAAGTGCAAAATATGCCTAAAGTCTTTCCAAAAACCAAGCCAGCTGATGAGACACATTAGAGTGCACACTGGCGAAAAGCCCTTTAAGTGCAATGTCTGTAGTCGAGCTTTCACACAAAAAGGATCTCTACAAATTCACATGTGGAAACATAACGGCATAAGGCCCCATGGATGTACATTGTGCAGTGCCAAATTCAGTCAAAAGGGTAATCTGAATGCACATATACTCAGAGTACACAGCGTGCCAGAGGGCGAACCAATTTATAGATGCACCTATTGTTCTTGCGTCTTCAAAAAACTGGGTAGTCTCAATGGACACATGAAGAGGATGCACTCAAATCCCGTGGAGGACAAATCGAGTTGCGACAATTCCACGGAAGCAGATATGCAAGCCACCGTGGACACTGTAATCTCACAGTTAGCTTCGCTGGAGTCTGGCATAAAGCATTCAATGAATCCGAATGACAATACGGCGGTCCAAACTTGTAAGAATGATATCCTTCAACAAGCACTGAAGAACAGCGGACTGTCTagcaaagagaaaaacttAAACACTACTGGTGCATCGAACTTGAAGAAAGTTGAGGCTGAGACTACTTTAGTGACTCTATTGGACAGAACTACTGATGGTTCCATGAGGAAGTACATCACAATTAAGCAACGGAGTATAGGAAGCATAAGATGGTACACGTGTTCCTATTGTCATAAAGAATTCAAGAAGCCATCTGATTTAATACGTCATTTACGTGTGCATACACAAGAAAAACCTTTTAAGtgttcCCATTGTTTTCGCTCATTTGCTTTAAAGTCCACGATGATGGCGCACGAACGTACTCATATGGGTGCAAAGAAGTATGAATGCAGCTCGTGCGATAAATTATTTGCGTGTCATAGTAGTTTCACGTCTCACGTCAGattGCACGCCAAGTCTCACAGATGCACTATCTGTGATAAATTCTTCACCTCGAGTGCAGTCTTGAGAGGTCACATGAAGATTCATACGCCAGAGAACTCCCAAATATCGGCCGAGGCGGAAGTTCTGGTGCCGCAAATCGTCCTGGAGGAACCGCTTATCATTAGCGATGCCGGAAATAAAATCAGCGTTGCTCAGGTTCaatcaaaacaaaaacaaatttataataatggtGATGTCGCAAGACCGCACAAGTGCTGGGTCTGTCCTGCGGCATTTCGAAAGATCAGTCACCTAAAGCAACACTATCGGAGACATACAGGAGAACGACCGTACAAATGTCAAAAATGCGACAGGAGATTTACTTCGAACAGCGTATTGAAATCTCATTTACATACTCACGAAGACTCGAGACCTCATAGCTGCTCCATGTGTGGGGCAAAGTTTTCCACACAAAGTAGCATGAAGAGACACTTGGTGACGCACAGCAACAAAAGACCATTTATGTGCCCTTACTGCCACAAAACATTTAAAACGTCCGTCAATTGCCGAaaacatatgaaaattcataaacacGAATTGGCACAACAgcaATTAGAGCAACAGAGAACGCCACAGACGTCGCAGCTCCCTCTGATAGAGGACAAACGTGAAATTACCTGTTTGTCCGATAATCTTGAATTGACTAATCAGATGGAAGTAACGTTTCAGCCGCAAATTACGCCGGATTTTACTCAGGCATTTTCGGATCAGTTTCAAGGTATCGCTATGGACAAGGACAAAACATTCCTCTCGCAAAATGATACGGCGCAACCGATAGTCAGTGAAAGTTTATCTGAAGCGGACATGGTCCCTTTAGGATCATCACAGACCTTGCATGCTGATGAAACTGGCACTATTACACTCCCTAATTATTCTGGCGATCAAACATTAACACCGgaaaGTATACGAGAAATTGAGGAAACGTTAAATCAGCAGTTGTTTAATATAGGAATGAATTTAGGTTTAGAGAATAATCTAACGAGGCAGATTAACGAGCCCAGTGCGGTCTCTTTGGATATGAGGGAGCAGcctgtattaaatataatttacgacAATAACAAAGGCATAGAATCGTCAAGTTCTAGTGCAATTACTGGAAATATGTTTCCCACACAGTTCGATACCTTTGATATGAGTCATATTTCTTTGCAGGCTGACACCGAACTAGATATAGGAATTAGTTCAGCCAATTCAACAAGTATGGCTAGTATTCTGCCACGATCAGCACAAGAAGAACAACGTCTCGTACCAGCAAAGACAACAGTCAGCATTGAGGATGGACAAACAAAAGCATCAAGACACCTCATGGTTGTAAGCTCGACGCAATCTTGTCCAGAATTATCACGACCTGTTCAAGCTTGTCCAAAGTACCCTAAAGTCATTGCCAAGGCTGACACGACGGATgaattggaaattcaaaatgtcgataaagaagtaaaaaatcgagaggaaatgaaaatacttgaCAATCATGATGAAGAAATTGCGACGTTTACGTGTGACATATGCGATAAAATCTTCCATAAGCAAAGTCAGCTAAAAACTCATATGAAGACTCATATATTACATGAAAGTATCGATCAAAATAAAGATGACTTGGTAATAGTTAGCGAAACAGATTCCCTCTTGCAGTGTCATATGTGCAGTAAAAAGGGTTTCGCTGCAGCTGCATTGAAAgaaCACTTAAAAACTCATCGGGGCACGAAGGAATTCCAGTGTACAGAATGTTCCTTAAGATTCTGCACAAACGGTGGACTGAGTAGACATCTAAAAATGCATGCAAGCAGACAaCAATGGAAATGTACGGTTTGTAGCAAAACATTTTCAAGCAAAGTACATCTAAAGTCCCACCGGCAAATCCATGAAATCAGCTGGAATACGAATTCAGTAGAGCCTGATAGTTCGCAAAAAGAACCATTAGCCAGAAGCACGGATTTCCTGTCAAATTATAATCTTAACGTTACCACAGGAAACGATTCATCAGTTTCGCAAAAAGTCTTACTCGATACCGTAGCTGAAAAGGATATAATCGATCAttcaaatGAACAAAgtgagaagaaagagaaacaggagTATACAAACAAGTGTAAATTCTGTCCGAAAACATTTCGGAAGCCAAGCGACCTAATAAGACATGTTCGTACGCATACGGGAGAACGACCGTATCAATGCGAATATTGTAACAAAAGTTTTGCAGTAAAATGTACATTGGACTGCCATCTGAAAGTGCatacaggaaaaaaaacattttcttgtCACGTATGCAACAGTTTATTTGCAACTAAGGGCAGCCTTAAGGTCCACATGCGACTTCACACagGTTCCAAGCCATTTAGGTGTATGCTGTGTGATCTACGATTCAGAACCTCGGGACACAGAAAAGTTCATCTACTGACCCATATGAGGGAACACAAAGGCGGACCGAAGCGAAAGCCAAAGCAGTCGAAGTTCAGCACAATCGCGGGTGTCGCTGCAGAATTGGAGAAGACAGTAGAAAGTGAAATAAACGACGACACTACCGTAATTAGTGAGGCTGCACAACCAGCCGAGTACTCGAATCTCGATTCGATTACCATTGACACTGCAGAACTTACCGATCAAATTACGTTTAATGCCGACGGCACAATATTGAACAACAATTCCATGTTGTCAGTCAATGAAAGTAACCAATTGGTAGCCAATTTGCATTTCCTCCTTGCGAATGGTCTTGTAACTATTCAAACCGATGAGTCACTTTTACCGCATCTGCCAAACGGCGACACCCAGGTCGTCCAAACTGAATCTAGCATCAGTGAACTCGTCACGTCTGAAGCCCTAGAGCACATAACCTGCAACGACACAAATTCTAACATCAGTATAACGACAGGACAGTGCGAAGACACTATTTCGGAGACTGTTCCTCAGAATTCgtccaaagaaatttcacaaacCATTAGTGATGTTGTTTCTGAAACGAAAAAAGCAACGTTACAGAGTGTCCCGAAACAAGGAGCACAGAGTAGTCAGTCCCGCAAGGAGTGCGATATTTGCGGAAAGACATTTATGAAACCGTGTCAGGTGGAGAGACACAAACGAATTCATACCGGGGAGAGACCTTATAAGTGTAATTTGTGTACCAAGTCATTTGCCCAAAAAGCAACGTTACAAATGCATCAGAAACATCACACTGGAGACAGACCCCATCCATGTCCCCATTGCGACTACTCTTTTACACAGAAATGCAATTTGCAAACTCATCTCAAACGTGTTCACCAGCTGGACACCTTGGAGGTAAAAAAGTTACGACGCGGTCAACAGGTATTGAGTGCTAAGTCAATGCAAGATAATCTGGACGATACTCGAATACTCAGTTTGGATGATATTTCGTTTGTGGACTTCTTGAAGTAA
Protein Sequence
MLTQHTVVTESVASAIDTLPLGFIISDDGHTLLAVTERDDGAVEFMTVPVAFIHQNHTAVQSTLKGNNENSIFQISLDGDVTTGIQHSTFVPTQPSQPLPIITNEMQVSETEKKNEIETNVEQYGIPSSLDLENPISNKSQGNVGSESQIPIEKPVVKRCPGRPRKDETILSIKSNNLQCEICGQEFTRQMLYKKHIEHHAEEKPHRCPKCPASFNVPTNFTLHMATHNTGEPKCPECGRKFARMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDAHLKLHNEKWSTEDVRKCKLCNKQFTQPALYRLHIREHYRLQTKIVKHTKRGTKHKTMYKCKICLKSFQKPSQLMRHIRVHTGEKPFKCNVCSRAFTQKGSLQIHMWKHNGIRPHGCTLCSAKFSQKGNLNAHILRVHSVPEGEPIYRCTYCSCVFKKLGSLNGHMKRMHSNPVEDKSSCDNSTEADMQATVDTVISQLASLESGIKHSMNPNDNTAVQTCKNDILQQALKNSGLSSKEKNLNTTGASNLKKVEAETTLVTLLDRTTDGSMRKYITIKQRSIGSIRWYTCSYCHKEFKKPSDLIRHLRVHTQEKPFKCSHCFRSFALKSTMMAHERTHMGAKKYECSSCDKLFACHSSFTSHVRLHAKSHRCTICDKFFTSSAVLRGHMKIHTPENSQISAEAEVLVPQIVLEEPLIISDAGNKISVAQVQSKQKQIYNNGDVARPHKCWVCPAAFRKISHLKQHYRRHTGERPYKCQKCDRRFTSNSVLKSHLHTHEDSRPHSCSMCGAKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTSVNCRKHMKIHKHELAQQQLEQQRTPQTSQLPLIEDKREITCLSDNLELTNQMEVTFQPQITPDFTQAFSDQFQGIAMDKDKTFLSQNDTAQPIVSESLSEADMVPLGSSQTLHADETGTITLPNYSGDQTLTPESIREIEETLNQQLFNIGMNLGLENNLTRQINEPSAVSLDMREQPVLNIIYDNNKGIESSSSSAITGNMFPTQFDTFDMSHISLQADTELDIGISSANSTSMASILPRSAQEEQRLVPAKTTVSIEDGQTKASRHLMVVSSTQSCPELSRPVQACPKYPKVIAKADTTDELEIQNVDKEVKNREEMKILDNHDEEIATFTCDICDKIFHKQSQLKTHMKTHILHESIDQNKDDLVIVSETDSLLQCHMCSKKGFAAAALKEHLKTHRGTKEFQCTECSLRFCTNGGLSRHLKMHASRQQWKCTVCSKTFSSKVHLKSHRQIHEISWNTNSVEPDSSQKEPLARSTDFLSNYNLNVTTGNDSSVSQKVLLDTVAEKDIIDHSNEQSEKKEKQEYTNKCKFCPKTFRKPSDLIRHVRTHTGERPYQCEYCNKSFAVKCTLDCHLKVHTGKKTFSCHVCNSLFATKGSLKVHMRLHTGSKPFRCMLCDLRFRTSGHRKVHLLTHMREHKGGPKRKPKQSKFSTIAGVAAELEKTVESEINDDTTVISEAAQPAEYSNLDSITIDTAELTDQITFNADGTILNNNSMLSVNESNQLVANLHFLLANGLVTIQTDESLLPHLPNGDTQVVQTESSISELVTSEALEHITCNDTNSNISITTGQCEDTISETVPQNSSKEISQTISDVVSETKKATLQSVPKQGAQSSQSRKECDICGKTFMKPCQVERHKRIHTGERPYKCNLCTKSFAQKATLQMHQKHHTGDRPHPCPHCDYSFTQKCNLQTHLKRVHQLDTLEVKKLRRGQQVLSAKSMQDNLDDTRILSLDDISFVDFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01395274;
90% Identity
iTF_00293894;
80% Identity
-