Cfil008106.1
Basic Information
- Insect
- Calameuta filiformis
- Gene Symbol
- -
- Assembly
- GCA_030142265.1
- Location
- JARQSU010000445.1:2016216-2020438[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00025 0.25 11.5 2.8 4 44 32 68 29 68 0.84 2 11 0.25 2.5e+02 1.9 1.3 17 29 75 87 69 99 0.82 3 11 0.18 1.8e+02 2.3 0.5 17 31 104 118 91 122 0.78 4 11 0.00024 0.24 11.6 1.1 8 29 124 144 117 150 0.79 5 11 0.00059 0.59 10.3 0.2 18 40 160 179 147 182 0.89 6 11 0.23 2.3e+02 2.0 0.5 18 29 188 199 184 207 0.83 7 11 0.048 48 4.2 2.4 10 41 209 236 203 238 0.79 8 11 0.11 1.1e+02 3.0 1.7 4 29 231 255 228 263 0.75 9 11 0.0045 4.6 7.5 0.7 5 44 260 295 256 295 0.84 10 11 0.025 25 5.1 0.1 16 41 301 323 297 325 0.87 11 11 0.002 2 8.6 2.2 15 43 328 353 323 354 0.86
Sequence Information
- Coding Sequence
- ATGGATGTCACTATAGTATTAGAGGGACATAAATCTGATCAACTTAGTAATATTGGATCCAGCGATAAGCAACAAGTAAGAGTAGAGAAGCATTATAAATACAGCCATGAAAACGCCTCAGAAAATGTACAAGGTTGCAATGCATGtggcaaaaaattaaataatctaaaaGCTCTAAGGACTCACATTAAAATGAAACATAGCCAAAGTAATAGGCAAGGATTTCGCTGTCGCCTCTGTGAAgagaaattccataaaaaagaGGACAGAAAGCTTCATTATGAGAAAATCCATTGTGGAGAGAGTCCATTCATATGCATGGATTGCGGAAAGGGATTCTCTAGTAAATCAGGACTATATGGTCATCGACAACTTCACAAAAAAGACCAACAATCCACTTGCCAATATTGTGGAAAAATCTTTAACAGGCGAGACAGCTATCACGAACACGTTCTTATCCATGTGGGTCCTCGGCATCGCTGTCCCTACTGTCCAAAAGAATTTGTGCAGCGTAGCAATCTCATACGTCATATACGAATTCATACAGGACAGAAACCGTATTCCTGCACCTTTTGCGAGAAACGCTTCTCCGACAAGGGTGCTTGCAATTCGCATATTCGGGTTCATACAAAGGAGGAGCAATGTGCCTGCCCATATTGTGGTCAAGTTTTCACCAAGAAACAAAAGTTGAAATATCATATTCGCAAACATACTGGGGAAGGTTTATTGAGTTGTGAGATTTGTGCAAAAACTTTTACAAATACTTTTGCCTTGAAGGAGCACAGAACTATTCATGATAGGCAAACACAAATGATGTGTATAGAATGTGGAAGAGCTTTTAGTAATCAAAAATACCTGGAAAGACACATGGCTACTGTACATCCTGGTCCtgaatctttatcttttacctGTCCAATCTGTGATAAAGTTTTTCATCAACAGTCCAGACTAAAATACCACATCGTAACGCATACtgagaagaaatattttgattgtGAACTCTGTGGAAAACGCTATAGCACCAGAAAATCGATGCAAAATCATTTACAACGGTATCATGATCTCCAGAGTAACGGGGTGGAATATAAGAATGCTAAAACTAGTATGCTCGACGAAGTGGAATTGAAGACTACAGCAGGTGTTGATtggatatcaaagaaaaatggattaGTTGCTAAAGAGCTGCTTAATGGAAAGTGCGAGCAAGATGAAATTGGAACGCCAGACGGTggtaagaatataaattttgcacgTGGCTCTTATGATGAACGACTGAACGATATAGGGCCGCTCGCGAACAAAGAATCCGTTccaaagaaagaagataaaagtttaattgatGTCAACTCCGTACTGAATGGATGGATGAATGCAATGTATAAACAAAATCTTGCGTTAGTGTCCACCGGGAAAATCAATGGAGCGGAAAAATATTGCCAAAATAATTGTGACAAAGCCTTAAATTTAGTGAAATTTACCGCAACATCTGCGAGTAGTAATGAAGATTTAGAAAGTAGTACTTCTAAAGTACCCATAACTCAAGCGCAATCTGTTAAATTTGCCATTTCTAGGACAGTGAGAGTCGTTGATATCTCTTCTAGTATCCATATTGCCACTTTACAGTCGCCCATTAAAGCAGAAAAGCCCCAGACTCAAACAGCAAGCTCAAACAAAGCAAAGGGTGAATCATTTTCGAAAGTTGATAACTGA
- Protein Sequence
- MDVTIVLEGHKSDQLSNIGSSDKQQVRVEKHYKYSHENASENVQGCNACGKKLNNLKALRTHIKMKHSQSNRQGFRCRLCEEKFHKKEDRKLHYEKIHCGESPFICMDCGKGFSSKSGLYGHRQLHKKDQQSTCQYCGKIFNRRDSYHEHVLIHVGPRHRCPYCPKEFVQRSNLIRHIRIHTGQKPYSCTFCEKRFSDKGACNSHIRVHTKEEQCACPYCGQVFTKKQKLKYHIRKHTGEGLLSCEICAKTFTNTFALKEHRTIHDRQTQMMCIECGRAFSNQKYLERHMATVHPGPESLSFTCPICDKVFHQQSRLKYHIVTHTEKKYFDCELCGKRYSTRKSMQNHLQRYHDLQSNGVEYKNAKTSMLDEVELKTTAGVDWISKKNGLVAKELLNGKCEQDEIGTPDGGKNINFARGSYDERLNDIGPLANKESVPKKEDKSLIDVNSVLNGWMNAMYKQNLALVSTGKINGAEKYCQNNCDKALNLVKFTATSASSNEDLESSTSKVPITQAQSVKFAISRTVRVVDISSSIHIATLQSPIKAEKPQTQTASSNKAKGESFSKVDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00294653;
- 90% Identity
- iTF_01474892;
- 80% Identity
- iTF_00252264;