Cind008214.1
Basic Information
- Insect
- Cacoxenus indagator
- Gene Symbol
- nfxl1
- Assembly
- GCA_035041755.1
- Location
- JAWNKX010000233.1:5211396-5215153[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 3 2.1e+04 -8.1 6.4 15 19 158 162 157 162 0.82 2 18 0.19 1.4e+03 -0.3 0.4 4 10 193 199 192 199 0.95 3 18 3.6e-08 0.00025 21.2 15.1 1 18 207 223 207 224 0.98 4 18 1.3 9.5e+03 -3.0 1.8 6 10 250 254 249 254 0.89 5 18 9.5e-05 0.67 10.3 13.5 1 19 260 279 260 279 0.97 6 18 1.8e-07 0.0012 19.0 14.7 3 19 316 332 308 332 0.88 7 18 2.7e-08 0.00019 21.6 13.0 1 18 367 384 367 385 0.97 8 18 0.32 2.2e+03 -1.0 0.5 1 10 394 403 394 403 0.78 9 18 1.5e-05 0.1 12.9 15.3 1 18 419 436 419 437 0.92 10 18 5.7e-08 0.0004 20.6 14.5 1 18 446 463 440 464 0.90 11 18 0.00082 5.8 7.3 11.7 9 18 509 518 502 519 0.88 12 18 0.0019 13 6.1 7.8 1 11 531 540 531 541 0.95 13 18 1.3 9.1e+03 -2.9 1.4 6 10 593 597 592 597 0.88 14 18 7.8e-06 0.055 13.7 4.1 1 11 603 613 603 614 0.99 15 18 0.031 2.2e+02 2.2 16.3 3 19 643 659 642 659 0.92 16 18 3 2.1e+04 -5.5 2.1 9 13 665 669 664 669 0.72 17 18 0.35 2.5e+03 -1.1 0.7 6 12 700 706 699 706 0.83 18 18 2.6e-06 0.018 15.3 13.3 1 18 710 729 710 730 0.89
Sequence Information
- Coding Sequence
- ATGAAGTCGTCACAGGGTAAAGCAGCTGCCGGAAGAGCTGTAAGTACAGCCGCGAATCCCTGGTCTGAAAATAAACCCGTATCTCAACGATCAATCGACAATTGTACATCCAGTTCTGAAGAAGAGGAAGACCTCGATGAGAAAGCTATTTTAGATTCGTTATACCAGAATTATACGCCTGCATTTAGTGACGTCAACCAGCTGAGTCGAACATCGGCATTTTTGGAAAACATATTGCATTCCGGTTCTGCTTCTTGTTTGATTTGCATTGGTAGTATTCGGCGGAACAATTCAATTTGGTCTTGCTCGAATTGCCATTGCATCTTTCATTTGAACTGCATTCAACGCTGGGCCAATGACAGTTTGAAGCAGTTGAAAGTTCGTCTAGAACAACAGCATGCTGACAATGGCCATTACAACACTTTGGGGGAGTATGTTCCACCCAAAAAACTACGAGGTGTGCTATGGTGTTGCCCACAATGTCGCTGGGAATACCGACCGGAAGAAAAGCCAGTGCAGTATGAGTGTTTCTGTGGAAAAGAGATAAATCCGCAAGTGCAACCATTTTTGGTACCTCATTCGTGTGGTGAAATTTGCGGCAAATTCCTCCAACCGAATTGCGGTCATAGTTGCAATTTGCTTTGCCATCCAGGACCTTGCCCGCCCTGTGTACAATATACATTCAAGTCATGTCTGTGTGGTAAATCTCCGCCTAAATCAGTGCGTTGCGTCAACAAGTTATGGAGTTGTCAAGAAAAGTGTAAAGAAGTACTGCCATGCGGCAAACACTTGTGCAATCAAGCATGCCATGCACCAGAACAATGCCCACCTTGTAGCAGAACCAGTGACCACCGATGCGATTGCGGTCGAGAAATTATGAGACGCAGTTGTTCTGATTTACGTTGGAAATGCAAAATGATTTGTGGTCAAAATTATTCCTGTGAGTTACATACATGCAAGAAAGTGTGTCATTCAGGACCCTGTGGTGAATGCCCATTGGGTCTTCCACGTTCGTGTCCTTGTGGAAAATCGAGAAAAGTTGGTCCTTGCACTGAGCCAGTTGATAATTGTGGTGACACTTGCGTGAAACTACTGCCTTGTGGAATGCATACTTGCCCCCAAAGGTGTCATAAGGGTGAATGCAATGAATGTTTAATTGTAGTCACTAAGAAGTGCCGATGTGGCTTGCACAAGAGAGAACTGCCCTGCTCAAAAGAATTTCAGTGTGAgaccaaatgcaaacaaatgcgCGATTGTATGAAACACTCCTGTAATCGAAAGTGTTGCGATGGCCAATGTCCACCGTGTGAAAAGATCTGTGGAAAACAGCTTTCTTGCAATAAACACAAGTGTCAATCAGTTTGCCACAATGGACCATGTTACCCGTGCAATGTGAAATCACAAGTGAACTGTCGATGTGGGAAAACAAGTCAAAGAGTACCCTGTGGTCGAGAACGAATATTTCGTATTGTTTGTTTGGAGCGTTGTCGAATTTCCCCAAAATGTCACCATTCTAACACGCATCGGTGCCATAAGGGGGACTGTCCGCCGTGTTATGAAATATGTGGTCTTCCAAATGACTCCAGCGGCTGTGGACACAAATGCACTGCGAAATGTCATGTCGCAGTGCGGATAGCGTTCAAATCTACTACTAACCAAAAAAAGCATGAATATAAAACTTTGCCTCATCCGAGATGCTGCGAAAAAGTTCTAGTTACTTGTGTCGGAGGTCACGAAATTGCAGAATGGCCGTGTTGGAATTCGAAGCCTTCATCGTGTCAGAGAAAGTGCAATCGACAGCTTAGATGTGGGAGCCACAAGTGTCAATTATTATGCCACTTTGTACCGGACATCAAAGACATGAAGcaacaagaagGTTGTGCCAGTTGCGAGGAGGGTTGTTTGACAGATCGACCAATGGGCTGTACGCATCCATGTGATCGACCGTGCCACTTACCTCCATGTTCTCCCTGTAAAGTAATTATCAAAACAAAGTGTCACTGCGGGCTAACTCAGCTAACATATACATGCCATGAGTTGTATAGTGCAATGGCTACTGAACAAGACATTCAGGATAGGCTGAAGCAGCTAAAGAGTTGTGGAAATCGATgtcataaaaatTTTCCCTGTGGGCATCGTTGTACAACAGTGTGCCATCCTGGAAAATGTCCAAATCCGGATTCGTGCcgcaagaaaatgaaaatttattgcaactgCAAAAGGTTGAAGCTTGAGTTTGCTTGCGATAAATACCGTGGTGGCTTTAATACTTTGGCTTGCAATGACACCTGTTTCGAGGCCATAGCTAAGGTCAATGAAATTCAGAAGGTGAAGCAGGAGCAGATGAAACGCGACGAAGAGACACGAAATCGCCTAGAAGTGGAACagtttgaacaaaaatttggcAAGCGGAAATATCGTGAACGTAAAGAGCATGTTAAGAGTGCCAAGGAAAATTTCAATTGGAGATTGGTTGCTATTTACGCCGGTCTTTTATCCTCTCTGTTTGTTGCCTTTGCTGTAGCATATTATGCCGAAAATTAG
- Protein Sequence
- MKSSQGKAAAGRAVSTAANPWSENKPVSQRSIDNCTSSSEEEEDLDEKAILDSLYQNYTPAFSDVNQLSRTSAFLENILHSGSASCLICIGSIRRNNSIWSCSNCHCIFHLNCIQRWANDSLKQLKVRLEQQHADNGHYNTLGEYVPPKKLRGVLWCCPQCRWEYRPEEKPVQYECFCGKEINPQVQPFLVPHSCGEICGKFLQPNCGHSCNLLCHPGPCPPCVQYTFKSCLCGKSPPKSVRCVNKLWSCQEKCKEVLPCGKHLCNQACHAPEQCPPCSRTSDHRCDCGREIMRRSCSDLRWKCKMICGQNYSCELHTCKKVCHSGPCGECPLGLPRSCPCGKSRKVGPCTEPVDNCGDTCVKLLPCGMHTCPQRCHKGECNECLIVVTKKCRCGLHKRELPCSKEFQCETKCKQMRDCMKHSCNRKCCDGQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCNVKSQVNCRCGKTSQRVPCGRERIFRIVCLERCRISPKCHHSNTHRCHKGDCPPCYEICGLPNDSSGCGHKCTAKCHVAVRIAFKSTTNQKKHEYKTLPHPRCCEKVLVTCVGGHEIAEWPCWNSKPSSCQRKCNRQLRCGSHKCQLLCHFVPDIKDMKQQEGCASCEEGCLTDRPMGCTHPCDRPCHLPPCSPCKVIIKTKCHCGLTQLTYTCHELYSAMATEQDIQDRLKQLKSCGNRCHKNFPCGHRCTTVCHPGKCPNPDSCRKKMKIYCNCKRLKLEFACDKYRGGFNTLACNDTCFEAIAKVNEIQKVKQEQMKRDEETRNRLEVEQFEQKFGKRKYRERKEHVKSAKENFNWRLVAIYAGLLSSLFVAFAVAYYAEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -