Cind001108.1
Basic Information
- Insect
- Cacoxenus indagator
- Gene Symbol
- grn
- Assembly
- GCA_035041755.1
- Location
- JAWNKX010000067.1:4382078-4413589[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-19 6.3e-16 57.9 4.7 1 35 388 421 388 422 0.98 2 2 9.4e-19 2.2e-15 56.2 6.3 1 35 448 481 448 482 0.97
Sequence Information
- Coding Sequence
- ATGCCATCGTCACATACAGCACCGCAAGTGTGTCGGCCGCACTTTCATCCGCCCCTGAGTTCGTGGCTCACCAGCGAGCATAAATCATTTGCGCCTGCCAGTCCATGGGGCAGTCCGTTTGCTTGCCCGCAGGAACCACAGGTCGATCATAAGCTGGGTCAGAGTATTGGCCAAAGCCATCAGACGACAGCAGCGGGCCAGCATTCATTTCCGTTCCCACCGACACCGCCAAAGGATTCTACACCCGATTCAGTACAAACCGGTCCATCGGAATATCAGGCCGTCGTGAATGCGTTCATGCATCAGCAGGCGACAGGTTCTACCTCACTGACGGACGCCAGTTGTGCGCTGGACATAAAGCcaacaatacaaaatggcGGTAGCGGTGTACATGGCCATGGTAGCCAAGCGCAATCGTCGGCGCCCAAACAGCGCGAAGgtagtaataataacaacaataacaataatagctccaacaacaacacaacatccaacaataataacaacaacacaaatagtaatgccaatgccaacaacaacaataacaacacatcGGCAAATAGCCACAATAATGGAGCAGCGCAAAGCGCTGGCAACGCATCCGCCTCATCCAATGGCCTCTTCGATGGCACTGCGCAAGCGCACTACGCCAACAGCTTGAGCGGCGGCagcggtggtggcggtggcaaCAATGTAAACATTGCATCGAACAACAGCTACGACAGCAGTTATGCCTCGTATGCAGCGCATCATCATGCGGCCGCTGCACAGCATCAGGCCGCCGTCGCAGCGGCAAATATGTTTCAAAGTTCCTCAGTCGCGGCGGCCGCTGTGCGTCATAGCATGGGCGTGGGTGcacatcatcaccatcacgCGCACGCGCACAGCCATCACAGCCATCATCATAGCCTTGGCGGTGGaacgtcatcatcgtcagcgTCATCGCTTGGGCATAGCCTGCACGGTGGCAGTGGCAATCATGGCAGTGGCGCTGGCGGTGGAGGTGTTGGCATTGGCAGCGTCGGCGGCATGAGCGCCAGCAGTAGTAGCTTAGCTGctgcagcggcggcggcggcggcagctgCCAATGGCAGCGGcggtgttggtgttgatgtGAAACCGGCGCGTACGAAACCACGGACAAGTGCTGAGGGTAGAGAATGCGTCAACTGCGGTGCCACCTCAACGCCACTGTGGCGACGTGATGGCACCGGTCATTATTTGTGCAATGCCTGCGGTTTATACTACAAAATGAATGGCCAAAATCGACCACTAATCAAGCCAAAGCGAAGACTGACACTACAGTCACTACAAAGCGCCGCAAAACGCGCGGGGACATCGTGTGCAAACTGCAAAACCACAACCACAACCCTTTGGCGACGGAATGCTAGCGGTGAACCAGTCTGTAATGCTTGCGGCCTCTACTATAAATTACACAATGTCAATCGTCCACTCACAATGAAGAAGGAAGGCATACAAACACGTAATCGTAAGCTCTCCTCAAAAtccaaaaagaagaagggTCTCGGTGGCGGTTGTTTGCCTATTGGCGGTCATCTTGGCATGGGCGACTTTAAGCCATTGGATCCAACGAAAGGTTTCGGTGGTGGCTTCTCAACCTCAATGGCGCAACATGGCCATCTTTCCAGTGGCTTGCATCCTGCACATGCGCATATGCACGGCAGTTGGTATACCGGCGGCATGGGCGCTCTGGGCGCTTCAAGTGGCCTGCAAGGCGGCTTCTCTACAGCTGGTTCGTTGGGTGGCGGAGTTGTGCCGCACTCGCAACCCTATCACTTGGGTCTAAGCTCAATGGGAACCTGGCGTACTGACTACACGTGA
- Protein Sequence
- MPSSHTAPQVCRPHFHPPLSSWLTSEHKSFAPASPWGSPFACPQEPQVDHKLGQSIGQSHQTTAAGQHSFPFPPTPPKDSTPDSVQTGPSEYQAVVNAFMHQQATGSTSLTDASCALDIKPTIQNGGSGVHGHGSQAQSSAPKQREGSNNNNNNNNSSNNNTTSNNNNNNTNSNANANNNNNNTSANSHNNGAAQSAGNASASSNGLFDGTAQAHYANSLSGGSGGGGGNNVNIASNNSYDSSYASYAAHHHAAAAQHQAAVAAANMFQSSSVAAAAVRHSMGVGAHHHHHAHAHSHHSHHHSLGGGTSSSSASSLGHSLHGGSGNHGSGAGGGGVGIGSVGGMSASSSSLAAAAAAAAAAANGSGGVGVDVKPARTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPIGGHLGMGDFKPLDPTKGFGGGFSTSMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASSGLQGGFSTAGSLGGGVVPHSQPYHLGLSSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00890633; iTF_00891511; iTF_00061582; iTF_01195674; iTF_00062399; iTF_00063237;
- 90% Identity
- -
- 80% Identity
- -