Basic Information

Insect: Cacoxenus indagator
Gene Symbol: -
Assembly: GCA_035041755.1
Location: JAWNKX010000315.1:1451893-1455509[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.0046 0.39 11.5 0.1 1 23 247 269 247 269 0.97

2 7 3.9e-05 0.0033 18.0 2.9 1 23 896 918 896 918 0.98

3 7 9e-05 0.0076 16.9 0.2 1 23 924 946 924 946 0.99

4 7 0.00021 0.017 15.7 1.0 1 23 952 975 952 975 0.94

5 7 2.9e-05 0.0025 18.4 4.5 1 23 981 1003 981 1003 0.95

6 7 4.1e-05 0.0034 18.0 5.0 1 23 1009 1031 1009 1031 0.99

7 7 0.0005 0.042 14.5 0.5 1 23 1037 1059 1037 1059 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.0046	0.39	11.5	0.1	1	23	247	269	247	269	0.97
2	7	3.9e-05	0.0033	18.0	2.9	1	23	896	918	896	918	0.98
3	7	9e-05	0.0076	16.9	0.2	1	23	924	946	924	946	0.99
4	7	0.00021	0.017	15.7	1.0	1	23	952	975	952	975	0.94
5	7	2.9e-05	0.0025	18.4	4.5	1	23	981	1003	981	1003	0.95
6	7	4.1e-05	0.0034	18.0	5.0	1	23	1009	1031	1009	1031	0.99
7	7	0.0005	0.042	14.5	0.5	1	23	1037	1059	1037	1059	0.90

Sequence Information

Coding Sequence: ATGGAATCCTCGCTACAGCGCAAGGAGCACGACACAACGCCCTTTATCGATCACCCACTGCTGGACTCCGAGTTGATGAGTTTGGCACGTTCCGACTGGGTTTTCCCAAAGGGTGTTGTAGGTAGCACCGTCGGCGGTGTTGGTAGTGCTAGCGTCAACGGTACCGGCGTCAGTAATACCCAACATAACAATGCTTATGCTTCGGTGAAGAATACGCTCGTGTCCAATATTCCCTTTCACAGCGAATACTTTCAATTTGTGAATAAGGACGTCGTGCATCATGCACTGGGACATGTTGACAGACAATCAATTGTCGGTACGGATGCATCGGTCGTCGATGCGGAGAACCGCAGCTATGAGTCAGACAAACACGAAACAGAagcagcggcggcagcagcagatTTCTTGACTCTGAACAGCAGCTTTCTCAGTGATAGCACGCATGATGACGTCGGACATGATAACACGCCAGTGTCGGCGTTTCCAGCGCATGCCATCGAACCGACAGTGCCTATGCATGATCAAACGACGCTGAACGAGGAAGATTTGTTATATGGTCCGAATACGCGTAAAGTGTTGCCACACAAGAAGCGCATCTCACGCAAGCTGCGCTGCACACTGAGTGACCTCGAGCCCACTGTTGACACGCCCTCCACATCGAACATTGTCAGCGTCATCGATGAACCAGTTGTCTACCAACACGACTTGGTAGCCGCCTCGCAAAAACAGCGTTTAATCTACAACTGCGAGATTTGTGGCTATGCGACAAGTGCTCAAATCGATTTCTTTGCTCATCTGAAGCAACACTATGAACCAAATCATGCGCCAGATCCAACACTTTTACTACAAACGAACCGTTCGTTGGATGGCGTGCCAAAGAACTGCGATAATTTAAGCAATATTGTCTTGAATCCGAAAGTGGTGCACACGCAGCAACGTGATGATGACCAAGCGAAATTAGATCAAGTTTTGCGTGCGGTTGAATTGGATTTTGATCATTTccagcatcaacaacagctccagcaacagcagcaacaacagcaacaacaacccctgCCACATGCTGTTTTGGCGCAGCCACACAATTCAATGAATCACACGGAGCATCACACTCAAGTTGCCAATAATACAGTAGTCCAAAATCCCAACCACACAGCTAACGGCGCCACACATGCCTGCTACTTAACCAGACCAAATGATGATGTCGAGTTCAGCGACACAGAGGACATGCTTGAGGGCATTCGCAATGTGGTCGACAAGGTGTCCTTTGAGGACACTTGCGATGATTTGGATCTGATAACATCAAATGAGTTGCGCACGAATTGGTTCACAGCAAGTAATTTCAGTGATATTAACTATAGAAACTGTGATGAGTCTTTCAGCGGGCAGCTGAGTCAACTTTTGCTTGTTGCTGAACCGCAAGACGaccagcagcaccagcaatCACAACACGAAGCGCCACCGCAACAACAAGCGgtaacaccagcaacaacagcagttgTAAGCACGGTGCCAACGGCTGTTGGGTCATCGCCTCAGACCCGACTCAGAGATATATACTCTGGCCAAGGACTGCCAACCCTAGCATACGATGCTCCTGGTGCTATACCAATGACACAAATATCCCCCGTCGTGACTTCTTATGCTACTgtagtagcaacaacaacagcagatgGGACCACAGCCAACATGGTGCAGCCATTGCCAACAAACGAACAGCTGCCGTTTTTGGTACACAACGGAACAATAGCGCAAGCTGACTTGTCGCCAACAGCAAATGACAATAGTGATATGCATCATATCCACCAACAGCAGGAGGAGCAAAAATTGATGCCGACGGTGACGccaccaacagcaacggcCACGACTTTGCTGAGTGTTCCTACGAAAAACGTTTCTTCCGCTGGCATACCAATAACACAAGTTGACTCTGATGCCGCTTCATATTCCGCTAAAACAAGAAGAGCAAGAACGGATACTGAAAGGGAGTTGACGGAGCGATTGATGGAGACTACATTATCACCAAACCAACAGTCAACGCAATCGCCACAGTCGCCGTCAAAGACTACGACACTCCCGACACTCAACTCCCACGAGTGGCACACTATGCCTTGGATGGTGAATACAtcatcacacacacaacagtTACAGCAACTGCCGCACTGGCCACACTCGACGACAGATACGACAACGCTTGCGACACTCAACTCCCACGAGCAGCACGACTGGCACACTATTCAAGGAGACAACCTGGAATTGGCAGAAAACAATCTGAAAAAACCGCAGAAAAAGAGaccattaaaaacaaagccaCAGCCGGCGATAGAGACAACAACGCTCACCACGGTCAATTCCCAGGAGCACCACGACTGGCACACTATTCAGGGAGACAACCTAGAAATATCagaaaacaaactcaaaaaaccgCGAAAAAAgagaccaataaaaacaaagccacAGCCGGCGTCAGAGATGACAACGCTCACGACAATCATCTCGCAAGAGTACTACGACTGGCACAATATTCAAGGAGCCAATCcagcagtaacaacaaaaaaacctagAAAACCACTAAAAAAGAGAGTAAAAAAACCAACGACTTCGTCGTTGTCACCAACGAAAAAGGCTCAATCGGAAAAAATGGTACGCGTCATAAAGAAAATGGACGGCACCTTAGCTAAGTTGTACACCTGCACGAAATGTGATCGTGACTTTAAGTCGCGAAACGCTCTCAAATACCACCAGCTCCGCCATACGCAGGAGCGTCCGTACAAATGCGATGTGTGTGGCATGAGATTCTATGCAGCCAACGCGCTCAAAGTGCACACGAATACGCATACCGGTGAAAAGCCGCACGCGTGTACGATATGTGGCCGCAGATTTGGCCGTTACGGCGATCTCACTTACCACTTGGAGTCCAAACACACCGCCCTGAAGGCACACATGTGCGAATACTGCGGCAAATCCTTTTCGCGCAAGTATTCACTAGTGGTGCACTGTCGCATACACACGAACGAGCGGAAATACAGATGTGATTACTGCAGCAAATCATTTCGTGCCAGTTGCTATCTGAAGACTCACATGAAGGTGCACACGGGCGAAAAGCCACATGCGTGCCCCAAATGCGGTAAGCGATTCCGTGTTGTTGGCGATATGCGTCGCCATTTGCCCACACACGACCGCGTTCGAGCTAAGAAAACATCGAAAACGAAATCGTCGTCAACAACGCCGGATGTCGATAATAGTGATGAAGATACGATGCCGGCAGCCGAATCGGCTGAGCAAGAAGCCAATGAGGAGGCAACTAACCGCGATGAAACGACTCCAGAACACTAG
Protein Sequence: MESSLQRKEHDTTPFIDHPLLDSELMSLARSDWVFPKGVVGSTVGGVGSASVNGTGVSNTQHNNAYASVKNTLVSNIPFHSEYFQFVNKDVVHHALGHVDRQSIVGTDASVVDAENRSYESDKHETEAAAAAADFLTLNSSFLSDSTHDDVGHDNTPVSAFPAHAIEPTVPMHDQTTLNEEDLLYGPNTRKVLPHKKRISRKLRCTLSDLEPTVDTPSTSNIVSVIDEPVVYQHDLVAASQKQRLIYNCEICGYATSAQIDFFAHLKQHYEPNHAPDPTLLLQTNRSLDGVPKNCDNLSNIVLNPKVVHTQQRDDDQAKLDQVLRAVELDFDHFQHQQQLQQQQQQQQQQPLPHAVLAQPHNSMNHTEHHTQVANNTVVQNPNHTANGATHACYLTRPNDDVEFSDTEDMLEGIRNVVDKVSFEDTCDDLDLITSNELRTNWFTASNFSDINYRNCDESFSGQLSQLLLVAEPQDDQQHQQSQHEAPPQQQAVTPATTAVVSTVPTAVGSSPQTRLRDIYSGQGLPTLAYDAPGAIPMTQISPVVTSYATVVATTTADGTTANMVQPLPTNEQLPFLVHNGTIAQADLSPTANDNSDMHHIHQQQEEQKLMPTVTPPTATATTLLSVPTKNVSSAGIPITQVDSDAASYSAKTRRARTDTERELTERLMETTLSPNQQSTQSPQSPSKTTTLPTLNSHEWHTMPWMVNTSSHTQQLQQLPHWPHSTTDTTTLATLNSHEQHDWHTIQGDNLELAENNLKKPQKKRPLKTKPQPAIETTTLTTVNSQEHHDWHTIQGDNLEISENKLKKPRKKRPIKTKPQPASEMTTLTTIISQEYYDWHNIQGANPAVTTKKPRKPLKKRVKKPTTSSLSPTKKAQSEKMVRVIKKMDGTLAKLYTCTKCDRDFKSRNALKYHQLRHTQERPYKCDVCGMRFYAANALKVHTNTHTGEKPHACTICGRRFGRYGDLTYHLESKHTALKAHMCEYCGKSFSRKYSLVVHCRIHTNERKYRCDYCSKSFRASCYLKTHMKVHTGEKPHACPKCGKRFRVVGDMRRHLPTHDRVRAKKTSKTKSSSTTPDVDNSDEDTMPAAESAEQEANEEATNRDETTPEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -