Basic Information

Insect: Cacoxenus indagator
Gene Symbol: -
Assembly: GCA_035041755.1
Location: JAWNKX010000169.1:1831845-1840140[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00023 0.019 15.6 3.4 1 23 263 285 263 285 0.98

2 11 0.63 53 4.8 12.8 1 23 291 313 291 313 0.96

3 11 8.3e-05 0.0071 17.0 6.6 1 23 319 341 319 341 0.98

4 11 0.00051 0.043 14.5 1.6 1 23 347 369 347 369 0.95

5 11 3.3e-05 0.0028 18.2 0.6 1 23 375 397 375 397 0.97

6 11 3.2e-06 0.00027 21.4 0.1 1 23 403 425 403 425 0.98

7 11 7.8e-05 0.0066 17.1 2.0 1 23 430 453 430 453 0.97

8 11 7.8e-06 0.00066 20.2 0.7 1 23 459 482 459 482 0.96

9 11 0.00019 0.016 15.9 0.1 1 23 549 571 549 571 0.98

10 11 0.017 1.4 9.7 2.7 1 23 691 713 691 713 0.95

11 11 0.0049 0.42 11.4 4.9 5 23 726 744 718 744 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00023	0.019	15.6	3.4	1	23	263	285	263	285	0.98
2	11	0.63	53	4.8	12.8	1	23	291	313	291	313	0.96
3	11	8.3e-05	0.0071	17.0	6.6	1	23	319	341	319	341	0.98
4	11	0.00051	0.043	14.5	1.6	1	23	347	369	347	369	0.95
5	11	3.3e-05	0.0028	18.2	0.6	1	23	375	397	375	397	0.97
6	11	3.2e-06	0.00027	21.4	0.1	1	23	403	425	403	425	0.98
7	11	7.8e-05	0.0066	17.1	2.0	1	23	430	453	430	453	0.97
8	11	7.8e-06	0.00066	20.2	0.7	1	23	459	482	459	482	0.96
9	11	0.00019	0.016	15.9	0.1	1	23	549	571	549	571	0.98
10	11	0.017	1.4	9.7	2.7	1	23	691	713	691	713	0.95
11	11	0.0049	0.42	11.4	4.9	5	23	726	744	718	744	0.92

Sequence Information

Coding Sequence: ATGTGTGCTGCTCAAAGTAATCCTCAACCGAGCTTCGGCTATACATGGGGCTTCGCCGACAATACACGGGCTGAATCCGTTTTGGAGATATCGCCGAATATTAACTACACCGTCAGTGGTGAGACTaTGCCATATCTGCTGTCCACGGATGGATCACTGACTGTACAAAAGGACGTAAAAGGTGCGCTAACCACGAATAAAGGCAACGTTGTACGTCGCATGTTCGTTGTCAATGACACATTTACGCCGGGGACACAAAGAGTCATAACCACGGGCGGTGGATCGACTATGGTCAAGAAACAGGATCAACAGGTGTTGAGCATTAATTGCGACAAGAACTATCTATTGGTCGATCAGGCAACGgcagctgcagcagcggcggcagaTCCCTCTCACTCGCTAACAAATGGCCTTGTTGACGCTAAAGGGCAGACCGTATTAACGCCGGCATCCGGCTCGAAGACACATTTCAGCCCCATTGGGCCGCTGCACCTAACACCCGAAGAGTGCAATGAAATATTGATGAAGCGTGCGCTTGCCGCCACCCATCAGACGCACACGATCACAACGGCTGAGGGACACCCGACGACAGCAAGTGACATACTTCCTGGTATTTCAGTTCAAGTACAGAAAGTTATACAAGGACTTGAAGACAATGAGGACTCACAGGGCGACGCACCCAATTTAAAAATGGAACCAGGCACACTAGAATTGTCCCCAAAGACCGAACTACAGGAATCCATGAATTACAACGAAGGCGATGCCATCATCAAAAAAGAGCGGCCGTATAGCTGCGACGAGTGCGGTAAATCGTTTCTGCTTAAACATCATTTAACGACACATGCACGCGTACATACAGgtGAACGACCTCATGTGTGTCCTCATTGTTGCAAGAGCTTTGCGCACAAACACTGTCTGAATACGCATCTGCTGCTTCATTCGACGGATCGACCGTATCAATGTACCGAATGCAAGAAGAGCTTCACGTTAAAGCACCACTTGTTGACACATTCGCGAGTGCACAGTCGCGACCGTCCGTTCGTCTGCCAGGAGTGCGGGCGAGCATTCCCTTTAAAGCGGCATTTAGTGACGCACAGCAAATTCCATGCCGGCGAGCGACCGTTCGTCTGCGAGGAGTGCGGCGAAAGTTTCGCACAGGAAAATCATTTGATCATGCATTCGCGTTTCCATGGCTCGATTAATCCGTTTGTATGCCCCGAGTGCGGAGTAACGTTTCCGCGTAAATTCCAGTTGGTCAATCACGGACGCATACATGGCAAGATCCCACATTCATGCACAATTTGCGGCAAGGAGTTTCTGCAAAAACGCACTTTGGTTTCTCATATGCGTCGTATACACACTGGTGATCAGGGACACCCTTGTGTTACGTGCGGTGAAAGCTTTGCTACAAAGGCCGAGCTCCATCAACACATACGCAGCGCCCACAATGGCGTCAACGCGAATACGGGCAATACAACGATCATAGCAAATCAGCAGCAGCTACAGCAGCCACACCATCAAGCCCAGGCGCCACCTCAGCATTCAGGTCATCCACAGACCATAACTGTTGTTAGCAATCCTGGCGGTAATTCGGCACTGCTCACTGTCAGCGCCACCGATGCCAATGGTGTGGCACGGCCACAGTTTGTTTGCCGTGAATGCGGAAGTGCCTTTAACAGTCGCGAAGCATTAGCTCTGCACTTGCGACTGCACACCGGCGACAAAAGTCTCATGACCGATTTATGTGCTTTGACAGCGGCATTGCCGGGTCATTTCCTGAGCACCGCTAGCTTAAATCCAGGCACGGTGGTCGCTACAAATCCGAACTTAGTTGCACAAAGTCCAGTGCCGGTGCAAATTATATCATCCACAGGACAGGTGATGTCGCAAACGACGCTGGTGCAAGCCGCAAACTCAACACATCCACAGACAGTAGTTACCACAGTGCCGACAatgcaacatcaacaaacacACCTCCACCAGGCTGCGGCCCAACACCATCAAGCTCAACAAGCCGCTgcacaccagcaacaacaacaacagcagcaagcaCAGAATAAGCCGAAATCGCATTTCTGCGCCAGCTGTGGTAAAGGTTTCGCGGCCAAACATGGCCTAATGCAGCACAATCGAAGACATCCCAGCGGTGGCTGCACAGTGCGCACGCACGTCTGCGAATGCGGCAAAGCATTCTTCCAAAAGAATCACCTGATGCTCCATCAACGTCAGCATCTGGAAACGAAACCTGTCATTTCGCAGCAACAGGAGGctgcacaacaacaagaacagcaacaacaacaacagcaacaaacccaggcagtgcaacaacaacagcttgGCACACGTGAAGTAATTATTGGTAATCAGTCTGTGCACGTACAAGTCCTGCCAGCAAACTCGAATCAGGCGCAAGTTATTAAATACGAGATCAACATACCACAGgagcgccaacaacaacagcagcaaagtaTGCAAACGGACTAA
Protein Sequence: MCAAQSNPQPSFGYTWGFADNTRAESVLEISPNINYTVSGETMPYLLSTDGSLTVQKDVKGALTTNKGNVVRRMFVVNDTFTPGTQRVITTGGGSTMVKKQDQQVLSINCDKNYLLVDQATAAAAAAADPSHSLTNGLVDAKGQTVLTPASGSKTHFSPIGPLHLTPEECNEILMKRALAATHQTHTITTAEGHPTTASDILPGISVQVQKVIQGLEDNEDSQGDAPNLKMEPGTLELSPKTELQESMNYNEGDAIIKKERPYSCDECGKSFLLKHHLTTHARVHTGERPHVCPHCCKSFAHKHCLNTHLLLHSTDRPYQCTECKKSFTLKHHLLTHSRVHSRDRPFVCQECGRAFPLKRHLVTHSKFHAGERPFVCEECGESFAQENHLIMHSRFHGSINPFVCPECGVTFPRKFQLVNHGRIHGKIPHSCTICGKEFLQKRTLVSHMRRIHTGDQGHPCVTCGESFATKAELHQHIRSAHNGVNANTGNTTIIANQQQLQQPHHQAQAPPQHSGHPQTITVVSNPGGNSALLTVSATDANGVARPQFVCRECGSAFNSREALALHLRLHTGDKSLMTDLCALTAALPGHFLSTASLNPGTVVATNPNLVAQSPVPVQIISSTGQVMSQTTLVQAANSTHPQTVVTTVPTMQHQQTHLHQAAAQHHQAQQAAAHQQQQQQQQAQNKPKSHFCASCGKGFAAKHGLMQHNRRHPSGGCTVRTHVCECGKAFFQKNHLMLHQRQHLETKPVISQQQEAAQQQEQQQQQQQQTQAVQQQQLGTREVIIGNQSVHVQVLPANSNQAQVIKYEINIPQERQQQQQQSMQTD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00062175;
90% Identity: iTF_01196162;
80% Identity: -