Basic Information

Insect: Cacoxenus indagator
Gene Symbol: -
Assembly: GCA_035041755.1
Location: JAWNKX010000218.1:1789415-1793011[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0012 0.1 13.4 1.8 1 23 351 373 351 373 0.99

2 8 2.2e-06 0.00019 22.0 0.9 1 23 378 400 378 400 0.98

3 8 1.2e-07 1e-05 25.9 0.2 2 23 409 430 409 430 0.97

4 8 7.3e-07 6.2e-05 23.5 0.3 1 23 436 458 436 458 0.98

5 8 9e-08 7.6e-06 26.3 3.9 1 23 464 486 464 486 0.98

6 8 3.3e-07 2.8e-05 24.5 1.9 1 23 492 514 492 514 0.98

7 8 7.3e-06 0.00062 20.3 5.1 1 23 520 542 520 542 0.98

8 8 0.00024 0.021 15.5 0.5 1 21 548 570 548 571 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0012	0.1	13.4	1.8	1	23	351	373	351	373	0.99
2	8	2.2e-06	0.00019	22.0	0.9	1	23	378	400	378	400	0.98
3	8	1.2e-07	1e-05	25.9	0.2	2	23	409	430	409	430	0.97
4	8	7.3e-07	6.2e-05	23.5	0.3	1	23	436	458	436	458	0.98
5	8	9e-08	7.6e-06	26.3	3.9	1	23	464	486	464	486	0.98
6	8	3.3e-07	2.8e-05	24.5	1.9	1	23	492	514	492	514	0.98
7	8	7.3e-06	0.00062	20.3	5.1	1	23	520	542	520	542	0.98
8	8	0.00024	0.021	15.5	0.5	1	21	548	570	548	571	0.94

Sequence Information

Coding Sequence: ATGGGATTCAAGCATACCATGCTGCAACGTCTGCATAGCTATGAGGTAACACCGGCGCGTACATCGCCCACGCATACGAACGCGGAATCAGTGTTACTGGCAATAAATACCGCGCACGAACATGGCCCAGCTGTGGCTGTCTCTACAGACGCACAACCAGCGTCGGCACATGTCACGGATTTCAGCATAAATCGCATATTGGGCGAGAAGCATGCGACTACTCCAAAGCCATCAAAGTCCTTAACTCCAACGACACCTACTGACATACTCGATCTCTCGAAGACGCGTCCTACGGAGCTCAGCACAAACAGCGCTTACCATACACCAATGCCAAACGGCATGGCTGCCAATTACACCACGCCACTTTATCCAACCTTCCATCACGATTTACTcgctgccgccgctgctgcgAATGCTACCAAATTCTATGCACAATTTTTTCCACATTTGTTGCCCGCCTACGCTGCGGCGGCAGCTGCCAATGCCGCCAATGCCGCCGCTCAACTGGTCACACCACCAACATCACCCTATCAGAAACAACGCTACTTTGCACCTTGTGTGCTCAACTCTGCGGTGGCAGGTAACCACGGCACCACACGCTTGGTGCCTCCAGCAGCATCCACAACACAACAATTGGCACAAGTTCTGCCGCCAAGCAGTTTGGTCACACCACCCGCCGGGCGCCCGAAGTCGAGTGCCTCATCCATTGCCACCACCAACTCATCTTCATCCTCCTCTTCGTCTGCCTGCAAGCGTATTGATTGTGCTGAGTGCCTGGATTATTACAAACACTACGGCTACAAGTCTACGTCCATGATTTCACCAGCAGCAAGTTCGGGAAATTCTCGTTACTTGTTGAGCGACGGCAAATCCACTTCGGCTACGGAGCTTTTACTTAACGCCGCCGCAACATCTACGATCTCTCTGACCAGTGTGACCAATCTTTCATCGAGGACTGCTGGCTTGTCAACGTCGGCCATGTATCAGGCTAAGAAATTAGCCGCTTTTGCTGGTATATCGGGTGGCGTTGCGCCGCCAGAAGAGATTAGCTACAAATGCCGAATTTGCGAGAAGGTCTTCGGCTGTTCGGAAACTTTGCAGGCCCACGAAAAGACTCATAAATCACCGCGTTACGAGTGCACTGACTGCGGCAAAGGTTTCTCGCAGTTGCGGAATTACAAATATCATCTCTCCGTACATCGTGGCACTAAAGAGTTCGCCGCTGAGTGCCCGGAGTGTGGGAAGACGTTCAACGATAAAGGCTACCTGAGTAGTCACATGAAAATTCATCGCAATAGGAAGGAGTACGAGTGCCCATACTGCCCGAAGTCGTTCAATCAACGCGTCGCCTTCAACATGCATGTGCGCATACACACTGGCGTGAAGCCGCACAAATGCGCTGAGTGTGGCAAGCGTTTCTCACGGAAAATGCTACTGAAACAGCACATGCGTACACACAGTGGCGAGAAACCTTATCAGTGCTCCGTGTGTGGCAAATCGTTTGCCGATCGCAGCAACATGACTCTCCACCATCGTCTACACTCGGGCATTAAACCATTCAGTTGCCCGCTTTGCCCGAAGGCATTTACAAAGAAGCATCATCTGAAGACACACCTCAACTACCACACCGGTTGCAAGCCATATGTCTGTCCACATCCGAATTGTAATCAAGCATTCACACAGTCAAGTAACATGCGCACGCATGCGAAGAAATGCCAATATAGACCGTTAGACGTAGAAACTGGAATGGGAACGGCATTTCCAGTGGTgtccacaacaacaatggcggTGACTGCCTCTTCAGCATCATGCTCAGCTTCATCTTCAATAACTGCCTCGCTAATGGCAACGGCAAAAAGTAATTTACTATTAAATAGCGCAAATAGCATGGTCAACTTCACTGGTGGCACGCCCACAAACACTGTGGTGGGCTTGCGCATGTTTACCGGTGGCAACCCAACAACGACTCCAGCATTTCCGGCCGCGCAGCCATCGTCATTGCTCAATGCCATGCGTCCGTATTGA
Protein Sequence: MGFKHTMLQRLHSYEVTPARTSPTHTNAESVLLAINTAHEHGPAVAVSTDAQPASAHVTDFSINRILGEKHATTPKPSKSLTPTTPTDILDLSKTRPTELSTNSAYHTPMPNGMAANYTTPLYPTFHHDLLAAAAAANATKFYAQFFPHLLPAYAAAAAANAANAAAQLVTPPTSPYQKQRYFAPCVLNSAVAGNHGTTRLVPPAASTTQQLAQVLPPSSLVTPPAGRPKSSASSIATTNSSSSSSSSACKRIDCAECLDYYKHYGYKSTSMISPAASSGNSRYLLSDGKSTSATELLLNAAATSTISLTSVTNLSSRTAGLSTSAMYQAKKLAAFAGISGGVAPPEEISYKCRICEKVFGCSETLQAHEKTHKSPRYECTDCGKGFSQLRNYKYHLSVHRGTKEFAAECPECGKTFNDKGYLSSHMKIHRNRKEYECPYCPKSFNQRVAFNMHVRIHTGVKPHKCAECGKRFSRKMLLKQHMRTHSGEKPYQCSVCGKSFADRSNMTLHHRLHSGIKPFSCPLCPKAFTKKHHLKTHLNYHTGCKPYVCPHPNCNQAFTQSSNMRTHAKKCQYRPLDVETGMGTAFPVVSTTTMAVTASSASCSASSSITASLMATAKSNLLLNSANSMVNFTGGTPTNTVVGLRMFTGGNPTTTPAFPAAQPSSLLNAMRPY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -