Cind005893.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cacoxenus indagator
Gene Symbol
hang
Assembly
GCA_035041755.1
Location
JAWNKX010000207.1:10000-24287[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.049 4.2 8.3 0.9 2 23 247 269 247 269 0.95
2 18 0.018 1.5 9.6 3.4 3 22 375 394 373 394 0.90
3 18 6.2 5.2e+02 1.7 1.3 3 21 404 422 403 423 0.95
4 18 0.0029 0.25 12.1 3.5 1 23 468 491 468 491 0.91
5 18 0.0031 0.26 12.0 0.3 3 23 642 663 641 663 0.96
6 18 5.6e-05 0.0047 17.5 0.1 1 23 671 694 671 694 0.96
7 18 6.3e-05 0.0053 17.4 0.1 2 23 805 826 804 826 0.97
8 18 0.0036 0.31 11.8 3.4 2 23 905 927 904 927 0.93
9 18 0.021 1.8 9.4 0.8 2 23 936 958 935 958 0.95
10 18 0.0022 0.18 12.5 0.1 1 23 971 994 971 994 0.97
11 18 0.00039 0.033 14.9 1.1 1 23 1048 1070 1048 1070 0.98
12 18 0.0019 0.16 12.7 0.9 1 23 1078 1101 1078 1101 0.96
13 18 0.15 12 6.8 0.2 2 19 1109 1126 1108 1127 0.94
14 18 0.00073 0.062 14.0 0.2 3 23 1210 1230 1209 1230 0.97
15 18 0.00012 0.011 16.4 0.6 1 23 1265 1287 1265 1287 0.97
16 18 0.00025 0.021 15.5 0.7 2 23 1356 1378 1355 1378 0.91
17 18 0.0052 0.44 11.3 0.2 3 23 1433 1453 1433 1453 0.98
18 18 0.00069 0.058 14.1 0.3 1 23 1786 1808 1786 1808 0.98

Sequence Information

Coding Sequence
ATGTCGGAGGAGAATCTTCTGCGTGCGCGACAAAACTGCTGTCGCCTGTGCCTCGCGCCACAAACTGAATGCATTTCAATCATTAATAGCTACGCCGCCGATCGGGAGCCACTTGCCACAAAAATTCACAACTGTGTCAACATCAAGaTTACGCCCAATGATCGTCTATCGTTGCATATTTGTCATGCCTGCATTAGCTACTTGAACTCATGGCAAAGCTTCAAAAATCGCAGCATTTCATCACAGAGCAAGCAGCGTAATTGGCTTGACgccaataaacaacaacagcttttGGACAATAATGTTAGTATATCGGAGGTGCATAACAgcagttgcaacaacaacaacaacactaccaGCACACCTGGCCTCGGAGGTGGTGAAAATGGCGAACGGGAAGACGAATCGTTGgataatacaacaaatatatttgaagGCATAACATCGCTGAAGAAACGCAAATCATTAACAGTTTATCCGCTGCCAGTTGTGCCGCCAATCAAGGATGAACCGATGGACTCAGATGATGAGTACAGCCAAAAGCAGAATGAGGAATCGGAAGAAATGGTCGATCCCACATTATTTCTGGAGCGGGTCGATCACGAGGGTGATATGCCTTTAATGGATGTCAGCTATGATTATAGTGTTCAACGCAatgctgttgccgctgctgcggTCGCATCATTGCCGCCGGCGACGGTTGCCAatgtggctgctgctggcaATAATAAGGTCGCCAAATGCCGTGCTTGTAACTTGGAGTTCTCGACACGCGCTAATGCTCGTCGACATGAGCGAAACTTGCATCCGAATCTTTTTGAGCTCTCCAAAGAGTCACCAAATAATACGCCGATTACAAAACCCACGCCAGCTTTGGCGGCCGCGCTCGAATTGCAGCGAGCCGCAGTTGCTGCTTCAACTGATGGGGCGTCCAAGGCTGCGGCCATTGGCAACATTTCGCAACAAAAGTACCGTCAAGAAGTGATGAACGCATTCAACAAATGCGAAGGCGGCGGCTACGATTACGATAATCCCGAAAAGTATCAGCATCTATTGAATGAGGAAAAGGTTAGCTTCATCAAGCAAAACATGGAGTTCCTCGAGCAGTACCAGAACATGACCTGTCGCTGCTGCAACAAAACGTTTACGACCTACAAGAATTTTATGGCGCACATTCGCAAGAAGTATCCATCGTTGCCGCGCAATTTATGCTTCCACTGCCTGAAGCAGACCGATTCGAAGGCCTTATTCATTTCGCATTTGAAGAAACGCAACTGCATCAATTTGTATCGAGTGCTGACCAACCTCACCCAAAAGAATCCCATTTTAATGTCGATGGCTGGTAAGGGATCGGTCGTGCCCGAACGCATGCGCGCCAAAGAATTGCTCATCAACAAGATGTACGAATGCAAATTGTGCCCACAACAGTTTCGCACTAAGCACGAGTTTCGTACGCATGTGTACGAGCGTCATGCGGACGTGCAACGCAAGGACAACGCGTCGATACAGTGTAGTTTCTGCAACCTCGAGATTGTCGATCCGGTCGAACGCAAGCGACACTACAATAACATGGACTGCATTGTTTCATTACGTTGCGTCACCTGCATGGGTAAATTCGACAACCATCAACGCTTTCTGGACCATGTCTATCAGGAGCACTTGGGCGGTATGAGCGATACTTCGTCAACAGTGAGTGGCGCAATCGGACGCCGTACCAGCGAAAATGTATCCTCGAAGCGTAATTTAAGCGTATTGGATGGTGGCGGTGGAGGAGGTGTTGGTCATGGTGGCGGCGCTTCATTCAATGATGATTCACACAGCAGCGGTGTTGCGCTCATATCCACACCGAGCGCCGTTGGCACTGGCTCGGCTGGTAATCAAGCACCAGCTAAATCACAGTATTTCTCGCGCATGCCTCAGGCATGTTCAATTTGTGGGCAgcaatataataattacaacaatGTGCTGCGTCACATGGAGTCCAAACATCCGAATAACCTACCGGAGACGTACAAATGCGTGCGCTGCGGAGCTGGTTTTCCACGACTTTCGAATTTACGCGAGCACATGATTAACTCGCATGGCACCGATCGCAATCGCATTTCCGGTGGGTTCGAGTATATTGTCAATGCAGACGCTTTAAAACTGATCGAAGGCGGCGCCGGCGCTGGCGGCGGAGGCACGTCGGCTAACGTGTATTCGGGTCGATACGACTACGTCATGAAAGATTTGATGTCGATTAATGGTGGGACACTCGatgatgacgacgatgaggcAGAGAGTAGCCATTCAAAGCGTATGCGCTTGGAATCTACTTTGCCATCGGCAGCAATTACTCACAGTAGCAacgccaataacaacaacaataataatacaaacggTAACAATGCCAACATGCAAAGCAGTCAAAAGGAGTGTCCCGTCTGCAATGCCgtattcaataataatattggccTCTCGAATCATATGCGTTCACATTCGACCGCCGCCAATGCTGCAAATGCTGCCAATGCTGCGGTGCTCGCTCAAGCTAATCGCATGACACCCAAATCGCTGATGATCACGGCAACACCAACGGCACCCTCTACCTCGACGTCGAACTCTACCAATAATGATGGTGACAGCTCGTCACCGCAACCTTTTTCGCAAGCTGTGGAGGCGCACTATCGTCGCTGCATCGAGCAGGCAGCGGACAGAAGGTTCCGTCGTATGCGTTGTCAGATGTGTCAGCGTCGCTTCTCGTCGAAGAAGTCCTATCGCTATCACATGTTCCAGGATCATCAGATTCGTAATGTACAATTCATTAAGTGCAAATTATGTAACGCAGACTTTGCCCATGAGAAGGGCCTTAAGGTGCACTTATTCAAAGTGCATAATACACTGATTAAGGACGAAATGATTATCAAACAGTTCGAGTGCGACATTTGTTCGATCGTGTACACGTCGGAGGTTGAGTTGTTGCAGCACAAGAAGAGCATACACGGCGCTGAGGATGCTCAGGCCGACGATATGGATGCGGACGAGTCGGCGGGCGCACTGGACGCTGGAGCCATTTCTACACCGCTCAGCAGCTTGAGCGCCAACAATACTATAATGCACTCATCTCATATAGGCGATAGTACCTCCACGCCACTGTACTGGTATCAGTGCAAGTATTGCCCTTCCAACTTCAACACTAACAAAAAGTTGGCAATACACGTCAATTCGCACGAGGAGTTCGACTCGAAGGACTATTCGTGCAAGGATTGTGGCAACGTGTACAGCGGACGCAAGAGTCTTTGGGTTCATCGCTACAAGAAGCATCCACAGATTGCCGAGCCTTCGGAATGCATGCTTTGCCGCAAGGTTTTCTTTGATCGTCAAATGTTGGAGAATCATACGCCAACCTGCAATCGCAAACCGATAACATCGACTGGTGCATTGGCAGAAACTGCTGCGCCACCTATGAGCTATAGTCGTGTGTATTTGCACAAAACAGGTGATGATGAAGAAGACGATGAAGAGGGTTTCGGCAGTGACAGCAACAGCGGTGCAACAGGAACAGTTGTTGGCACACTTGGCGGCGGTGAGGTTGAGGTCTCCATGTCTGGAACATCATCGATGAAATTTAAGATACCCGAGGTTGCGTGCACCATTTGTGGTGCACGTTTTTCTGATCAGGAAAGATTCACCGAACACATCGAACGTCATGAGCGTGAACTCTACACCGACAATCCCCTAGCAGCCATGTTCGATGACGGACCCAGCGACCCGAATCAGTTCTATTTGGATCGTGTCAACGATAACGGCGAGTACGCTTGTGATCTGTGCTCAAAGACGTTCTCCCAGATGACCGCACTCAAAGTGCATCGTAAATGGCATTTCAGAGGTGATAGCAAACAGAACCAGGTCGACGGCGATCCAGCAGCCAGTGCTGCGAGCAGCCAACACAACCACATCAGCTTCCAACAAAACTCTCCGAAGAACATCCAACCACATCTGCAGGAGCTGCATGCGGTGGGCCTAATGCCGAACCATCAACTACAGAAACAGCATTCAAAGTCCCTGAAACGCAAGCGGGAGCTGAAATGCGAATATTGCCCATCGACGTTCATCAGCAACAATAACCTGCGGCGTCATCTGTTCGAGCTGCACAAGAACGAGGTGAGCAACTTACCGGAACCGCCGAAGATTGAAATCGATGAGACGCGTTCGTGTCGTCGTTGTGATTTGAAATTCCAATCAATTGAAGAGTGGATCGAGCACAAGGTTAATGATGCGCGTACAATGCGTCCGTTTGGGCCATTCCAGTGGGGCTGTGACTTGTGCGGTGAATATGTATCGCGCAAGGAGAAACTGATCAATCATATAAATAATCACCAAAAAGAAGGCACAATTGTACCCGTCGAACAACGAAAGAAAGCGGCGCATAGTTCCGAGAAGAATAAGCAGAAGTCATCTGACCTTGTGAAGGAGGAAGGTACCTCGAATAGTCAACAAAGCGATGCTGTTGAAATGGCGCCCGCCGATGTGGAAGAGTACGAAGAGGATGCCGATTATTTCATTGAGGAGGATGAGACCGGTGAGTACGAAGAAGGTGAAGACGATGGTGAGCCTTTGTATGATGGCGCTAATGAAGACGAGGAAGAAGATGATGAACTAAGAATGAAGCATGAAGTCGTTGAGCATGAGAACGGTGACGGTGACATTCTCGAAAATGATGTCGACGAAGACgacgaagatgatgatgacctTCATGTGGATGTAGATGTCAATGATGATGAGGAAGACTCTGACGATGATGAAGAGCTCGGTGCTGATGGCGAAGACGCCGATGCAGAGGATGAGGATTATGAAATGGGTGACGAAGATGTCGAATACGAAGGTGATAACGAAAATGCGAAATTTTCGAAAGCAAACTCAcctgaaatgcaaaataagGAAGGAAACACTGTCGGCGTGAACGACGAGAATAAATCGAAGCTGTTAATACCAGACTTAGTAGTACAAAGAGTCGCGGCATCAATGTcgctaacaataacaaacacagCTGCTTTCAATGCAACCATATCAAGTGGCGACAATAAAGAACATATTGATGCGGTTGCAatcaatggcaacaacaacagcaacagcaatagtggcaacaataacaacaacaacggcgacaATATCGATGGCAATGCCAACACTGACACCAAGACGAACAACAGAGATACTTCAAGCGATAAGAGctatgatgatgacgattcCAGCAACAGCAGTGATTCTAGCTCCAGTTCATCGAgttcatcatcaacaacaacttccACGGGTGAGCATCGTAAAGGTGCATCGGCAAATAAAGATGCTGCTGCAGAACATGTTAAATCTAGTTTTCCTTGTGATCTATGTGAAGTTTATTTCGATTCACAGCAGAATCTTCAGACTCATGTTAAGATGCATTTTATTAATGGTCCTAGCTCTGTGAACTCTTCAACTACCTTGTCAACTCCAGCTTGCGTCAAAAAGGGTGCTGCTGCAGCGAAGACATCGCAAAATAGTCTGAGCTCAGGCAGCGGCAGTGCCAGTGGCAACAATAGAAATAACAGCAGCGGTAATGTTGGTGTAAAATCGAATCAACATTAA
Protein Sequence
MSEENLLRARQNCCRLCLAPQTECISIINSYAADREPLATKIHNCVNIKITPNDRLSLHICHACISYLNSWQSFKNRSISSQSKQRNWLDANKQQQLLDNNVSISEVHNSSCNNNNNTTSTPGLGGGENGEREDESLDNTTNIFEGITSLKKRKSLTVYPLPVVPPIKDEPMDSDDEYSQKQNEESEEMVDPTLFLERVDHEGDMPLMDVSYDYSVQRNAVAAAAVASLPPATVANVAAAGNNKVAKCRACNLEFSTRANARRHERNLHPNLFELSKESPNNTPITKPTPALAAALELQRAAVAASTDGASKAAAIGNISQQKYRQEVMNAFNKCEGGGYDYDNPEKYQHLLNEEKVSFIKQNMEFLEQYQNMTCRCCNKTFTTYKNFMAHIRKKYPSLPRNLCFHCLKQTDSKALFISHLKKRNCINLYRVLTNLTQKNPILMSMAGKGSVVPERMRAKELLINKMYECKLCPQQFRTKHEFRTHVYERHADVQRKDNASIQCSFCNLEIVDPVERKRHYNNMDCIVSLRCVTCMGKFDNHQRFLDHVYQEHLGGMSDTSSTVSGAIGRRTSENVSSKRNLSVLDGGGGGGVGHGGGASFNDDSHSSGVALISTPSAVGTGSAGNQAPAKSQYFSRMPQACSICGQQYNNYNNVLRHMESKHPNNLPETYKCVRCGAGFPRLSNLREHMINSHGTDRNRISGGFEYIVNADALKLIEGGAGAGGGGTSANVYSGRYDYVMKDLMSINGGTLDDDDDEAESSHSKRMRLESTLPSAAITHSSNANNNNNNNTNGNNANMQSSQKECPVCNAVFNNNIGLSNHMRSHSTAANAANAANAAVLAQANRMTPKSLMITATPTAPSTSTSNSTNNDGDSSSPQPFSQAVEAHYRRCIEQAADRRFRRMRCQMCQRRFSSKKSYRYHMFQDHQIRNVQFIKCKLCNADFAHEKGLKVHLFKVHNTLIKDEMIIKQFECDICSIVYTSEVELLQHKKSIHGAEDAQADDMDADESAGALDAGAISTPLSSLSANNTIMHSSHIGDSTSTPLYWYQCKYCPSNFNTNKKLAIHVNSHEEFDSKDYSCKDCGNVYSGRKSLWVHRYKKHPQIAEPSECMLCRKVFFDRQMLENHTPTCNRKPITSTGALAETAAPPMSYSRVYLHKTGDDEEDDEEGFGSDSNSGATGTVVGTLGGGEVEVSMSGTSSMKFKIPEVACTICGARFSDQERFTEHIERHERELYTDNPLAAMFDDGPSDPNQFYLDRVNDNGEYACDLCSKTFSQMTALKVHRKWHFRGDSKQNQVDGDPAASAASSQHNHISFQQNSPKNIQPHLQELHAVGLMPNHQLQKQHSKSLKRKRELKCEYCPSTFISNNNLRRHLFELHKNEVSNLPEPPKIEIDETRSCRRCDLKFQSIEEWIEHKVNDARTMRPFGPFQWGCDLCGEYVSRKEKLINHINNHQKEGTIVPVEQRKKAAHSSEKNKQKSSDLVKEEGTSNSQQSDAVEMAPADVEEYEEDADYFIEEDETGEYEEGEDDGEPLYDGANEDEEEDDELRMKHEVVEHENGDGDILENDVDEDDEDDDDLHVDVDVNDDEEDSDDDEELGADGEDADAEDEDYEMGDEDVEYEGDNENAKFSKANSPEMQNKEGNTVGVNDENKSKLLIPDLVVQRVAASMSLTITNTAAFNATISSGDNKEHIDAVAINGNNNSNSNSGNNNNNNGDNIDGNANTDTKTNNRDTSSDKSYDDDDSSNSSDSSSSSSSSSSTTTSTGEHRKGASANKDAAAEHVKSSFPCDLCEVYFDSQQNLQTHVKMHFINGPSSVNSSTTLSTPACVKKGAAAAKTSQNSLSSGSGSASGNNRNNSSGNVGVKSNQH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-