Cind008988.2
Basic Information
- Insect
- Cacoxenus indagator
- Gene Symbol
- Znf574
- Assembly
- GCA_035041755.1
- Location
- JAWNKX010000240.1:3400345-3413822[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.021 1.8 9.4 1.0 1 23 308 331 308 331 0.96 2 27 0.038 3.2 8.6 0.2 6 23 340 357 340 357 0.97 3 27 4e-05 0.0034 18.0 0.8 1 23 363 385 363 385 0.98 4 27 0.0013 0.11 13.2 1.5 1 23 397 420 397 420 0.92 5 27 0.058 4.9 8.0 1.8 1 23 428 451 428 451 0.97 6 27 0.0021 0.18 12.6 1.9 3 23 459 480 457 480 0.93 7 27 0.0029 0.25 12.1 4.1 1 23 521 544 521 544 0.93 8 27 5.2e-06 0.00044 20.8 1.3 1 23 550 572 550 572 0.98 9 27 0.00036 0.03 15.0 3.7 1 23 578 601 578 601 0.98 10 27 3.7 3.1e+02 2.4 2.4 2 23 856 878 855 878 0.91 11 27 5.9 5e+02 1.7 1.0 2 23 935 957 934 957 0.90 12 27 6.8 5.8e+02 1.5 0.2 6 23 967 984 967 984 0.94 13 27 0.011 0.93 10.3 0.5 1 23 990 1012 990 1012 0.98 14 27 8.8e-06 0.00075 20.0 2.7 1 23 1024 1047 1024 1047 0.97 15 27 8.3e-07 7.1e-05 23.3 0.6 1 23 1055 1078 1055 1078 0.97 16 27 0.18 15 6.5 0.9 2 23 1085 1106 1084 1106 0.95 17 27 0.0006 0.051 14.3 2.4 1 23 1113 1136 1113 1136 0.93 18 27 3.3e-06 0.00028 21.4 1.2 2 23 1143 1164 1142 1164 0.97 19 27 0.00071 0.06 14.1 2.2 1 23 1170 1193 1170 1193 0.98 20 27 0.83 70 4.4 0.9 2 23 1396 1418 1395 1418 0.91 21 27 0.02 1.7 9.5 0.3 1 23 1451 1473 1451 1473 0.98 22 27 0.0042 0.36 11.6 3.7 1 23 1485 1508 1485 1508 0.94 23 27 1.1e-05 0.00092 19.8 1.1 1 23 1516 1539 1516 1539 0.98 24 27 0.0085 0.72 10.7 1.1 2 23 1546 1567 1545 1567 0.96 25 27 0.00024 0.02 15.6 2.1 1 23 1574 1597 1574 1597 0.94 26 27 4.6e-05 0.0039 17.8 0.9 1 23 1603 1625 1603 1625 0.98 27 27 0.0006 0.051 14.3 3.6 1 23 1631 1654 1631 1654 0.98
Sequence Information
- Coding Sequence
- ATGTTCGCTTGTTTTTTATGCTTGGAAAGCAAATCTTTGGCTATTGATGGATTTATTGAGATAGAGTCGGCGGAGAATAACGTAGGAGTAGCCGACGTCATtagtaaatattttgcacTCCAGttAAAAGACAGCGAACGTTTGCAACGTATATGCCGAGAATGCTGGAACGTAATCATAAACTTCCACAATTTGTATGAATTTGTATTGGTTACGCAGAAAGCTCTCCGGGAACCTAAGCACAACCCTTTGGAAAATgatccactgccactgccacagAAAGTCTTCGATGAAATTGAAAAGCCTATACAAAATGACGATTATTCgtcaaataatatattttgttatccAGAAATTAAGATAGAGGATCGCGAATTGGACGAATTGCCAAAAATAGAAGTTATCGAAAATGAAGCCTTCACAATTGAACAGCAAAATGTTTTGCGTTCCAGCAGTCgtataaaacaattgaaacgCTATAAAACTGAAGGAAAGACTGCTGAAATTGTAAATACACTCAGCATTAAATTAGACGAGGATATCGTAGTACCCATAAAACGACGCGGCCGACCTCGAATAGATAAGCAGGACAATGAACTTCAGgaggaagaaaagaaaattgaaaaaactgCCACTGATAAGGAATTATATAATGATCTTAATGACTTCGGAACCGAAGCTAAATGGTCGTCGGATGATAATAGTACTTTTGGCGAAGAAAGCAGTGACTTTGAATCTGAACAAAATTCCAAGGAGAAATATGCCGTCATACCGAAACGAGTTGCTGTGCGACCGAAGAAGTATAATAAACGACCGAAGTCTTCCAATGTTCCTGTACGCATGGCCCGTGAAGACATCGAACGCCGGAAGGCGCAACAGGAGGAGTACGATAAAATACTCGGAAGGttttacaataataagttTGCTTGCCCCATTTGTAATCTTTTTGTCCGCAACTTCACTGAAATGGTGCGACACCACCGAATAACGCACAACATTCAAGGCTACATGGCATGTTGTGGGCGCAAATTTAAGCAGAGAAAAACATTGGCTGAGCATGCTCTGGTGCACTGGAACCCGGATCACTTTAAATGTAATATTTGTGAGAAGGTTTTTCAAAACTCAAGACTCCTAGAGAGCCACGAGCAATCTCATAGTAGTTCCGGCGAAACGCGGGACAAGTTGATTTTTCAGTGCGATAAGTGCCCGAAGGCGTTTGCAAGCAAAAGCACATTCGACTATCACAATCTTTCAAAACACGTTCCCAAATCGGAATTCAAGTTCTCCTGTACCCAATGTAACAAAAAATTGCTCACTGagcgtaaattaaaaaaccacATAAAATCCGCTCATGATCCAGAGAACGCCATTATTTGCGATAAGTGCGGTAAACAAATGCGTACAAAGCATAGCCTGAAAAAGCATCAGGAACTAATTCATTCGGACGTGCCACGGCCGGAGCCAGTACTAATGCAATGTGAAATTTGTTGTACATGGCTCAAGGACATTAGGGGCCTCAAGCAGCATATGAAAAGCATTCATATTGAAAGTGCTGGTGAGCATCGTTGCCATGTTTGCAACAAAGTTTCGCCAAATGCACGCGCACTTCGCCGTCACATCTACCACAATCACGAATGTGAACGGAAATTTAAATGCACAATGTGCGAGAAGGCATTTAAAAGACCTCAGGAGCTAAGGGAGCATACATCGACTCATACCCGCGAAGTACTGTACACCTGTCCGAACTGTCCCATGACTTTTTTCTCAAACTCTAATATGTATCATCATCGAAAGCGCTTGCATCCCGCCGAATGGGAAGCTGATCGTAAGAAGCCCAACGTGACCGTCATGCAACGAGCGTTGGAGAGCAATAACAATgagaaaatatgtttaaattgCTGGACAATTATGTCTCAGTTTAACAGCTACTATCAGCGCATATATTTGGCACATTGCAGTTCAAGTTATGTCGAAAAGAATCCTCTGCCACAAGAAGTTCTTATACAGTCTAATCCGCTTGTCATTGTCAATAATGAGATCAAAGCAGAAGTTCAGGACCTGGAAATGCTCCCTAAAATGGAGGTACTTGAAGATCAAGTCCTGAACCATGAGACCGACGAAATTATGGACCACTGGCCTAAAAGGGAAATGGCGACCACAGATTTTTTAGATAACGCTGATTCTGATAGTAATATGCCGCTTGCGAGTTATTTACCTAACAGCATTGATGCTGGTTCTAGTAACAGTGACCTTAATAGAGAAACAGatctaataaaaaaggaaaacgaaaATGAGTGGAATATGATATGGTTGAcgaataataatgacaatgatgatgagcCTAAAACTAATGATGGCTCATCTATTGGTACAGACGACGAAGCAAGTTCTAGTAGCTCTGAGTGTGACTCGGATGCTAATTGGTCGACTACAAGAGGCAGAGTACGTTATACTCAAATTAAAAACAGCGAAAAATCTCGTGTTTCTAAAACATGTAAAACTGGCGAGAAAATCGTAGAACAAAATGGCTACGATGAGATTATTGATAAAATCTTTAAGAAATTGCCTTGTCCAAAGTGTGATCTGCTCGTGTGTAACTTCGACGATTTGAAATATCACTGTCGCATATCCCACAAAATGGAATCTGGTTATATACAATGCTGCAGTCGAAGGTATTTTTCGAAAGAATCGTTGGGTGTGCACGCTCTGTTGCACATGAACCAGGAGTACTCTCAGATCGAAGAACAAAAGTCTACACCACATGGCTACGAAGAGGTTATTGATAAAATCTTTAAGAAATTGCCTTGTCCAAAGTGTTATTTGCTCGTGAGTAACTTCGACGATTTGAAATATCACTGTCGGATATCCCACAAAATGGAATCTGGTTATATACAATGCTGCAGTCGAAGATTTTTTTCGAAAGAATCGTTGGGTGTGCACGCTCTGTTGCACATGAACCAGGAGTACTTTCAATGCAACACTTGTAGTCGCGTATTTCTGGATTCCCAGGCGCTCTATATTCatgaaaacacacacacaaacgctcAGGATATAAAGGATAAAAAGCCATATCAGTGCGACAAATGTCCAAGGTCGTTTACCACAAAACAGTCACTCAAAAACCATTCGCTTACAAAGCACCTTCCAAAATCCGAGTACAAATTTACTTGTACAGAATGCGACAAAAAATTTCCTACGGAATGGAATCTTAAGGTTCACATGAAAAATGTGCACGACCCCGAAAGCACGACTGTTTGTGATATTTGTGTCAAAGAGGTGCGCGCGGTGTATCTTAAGCGGCATCATCAGACTTTTCACGAACAAGCAGATATAGAGCATCGCTGCGAAATTTGTAATAAGACGTCGATCAGCGCTGATGCCCTAAAGCGACACATATATCACTATCACCAATGCGAGCGAAAGTTAAAGTGCACAATGTGTGACAAGGCATTCAAAAGACCTAAGGATCTCAGAGAGCATACATCGACTCATACCCGCGAAGTGCTGTACACCTGTCTGAACTGTCCCAAAACTTTTATCTCCTACTCTAGTATGTATCAGCATAGAAAGCGTTTGCATCGCGCCGAAGTGGAGGGCGATCAATTACTAGAGGATCCCAATAAACACTTCATTGTCAATAATGAGATCAAAGTAGAAGTTCAAGACCTGGAAATGCTCCCTGAAATGGAGGTACTTGAAGATCAAGCTGTGAATCATGAAACCGACGAAATTTTGGAGCACAGGCCTAAAACGGAAATTTCGACCACAAACTTTTTAGATAACGTCGATTCTGATAGTGATATTCCGCTTGCCAATTATTTGCCTCACAGAATTAATGCTGGTTCGAATAACAGTGACCTTATTAGAGGAGCAGatctaataaaaaaggaaaacaagagTGCGTTCAATATGATGTGGTTGGcgaataataatgacaatgaGAATGAGCCTAAAACTAATGATGGCTCATCTATTGGTACAGACGACGATGCTAGTTCTAGTAACTCTGAGTGTGACTCGGATTCTAGTTGGTCGACTACAAGAGGCAGAATACGTTATACTCAAATcgaaaaacgcaaaaaaccTCGTGTTCCTAAAACTTGCAAAACTGGCGAGAAAATCGAAGAACAAAAGGCTAAACAAAATGGCTACGATGAGATTATTGATAAAATCTTTAAGAAATTGCCTTGTCCAAAGTGTGATTTGCTCGTTCGTAACTTCGACGATTTGAAATATCACTGTCGCATATCCCACAAAATGGAATCTGGTTACATACAATGCTGCAATCGAAAGATTTGTTCGAAAGAATCGTTGGGTGTACACGCTCTGGTGCACATGAACCAGGGGTACTTTCAGTGCAACACTTGTAGTCGCGTATTTCTGGATTCCCAGGCGCTCGATATTCatgaaaacacacacacaaacgcacaggGGATCAAGGATAAGAAACCTTATAAATGCGACAAATGTCTAAGATCGTTTACCGCAAAGCATTCACTCAAAAACCATTCGCTTATAAAGCATCTTCCAAAATCCGAGTTCAAATTCACTTGTTCAGaatgcaacaaaaaATTTCCTACCGAACGGATGCTTAAGATTCACATTAAGAAAGTGCATGATCCCGAAAGCGCGACTGTATGTGATATATGTGGTAAAAGTTTGCGCTTGGGGAACCTCAAGGGGCATCATCAGACTTTTCACGAGCAAGCAGGTATAGAGCATCGCTGcgaaatttgtaataaaacgTCGACCAGTGCTCGTGCCCTAAAGAGACACATATATTACAATCACGAATGCGAACGAAAGTTTAAGTGCACAATGTGTGACAAGGCATTCAAGATTCCTAAGGATCTAAGAGAACATACATCGAGTCATACCGGCGAAGTGCTGTACACCTGTCCGAATTGCCCAATGACTTTTTTCTCAAAAGCGTATATGCATAAACATCGAAGGCGTTTGCATCGCGCCGAATGGGAGGCCGATCGTATGAAATCCAACGTCAACCTCATGCAACGCTCGGTAGATGATACAGCGGCAATGGATATGAATAGTAGCTAA
- Protein Sequence
- MFACFLCLESKSLAIDGFIEIESAENNVGVADVISKYFALQLKDSERLQRICRECWNVIINFHNLYEFVLVTQKALREPKHNPLENDPLPLPQKVFDEIEKPIQNDDYSSNNIFCYPEIKIEDRELDELPKIEVIENEAFTIEQQNVLRSSSRIKQLKRYKTEGKTAEIVNTLSIKLDEDIVVPIKRRGRPRIDKQDNELQEEEKKIEKTATDKELYNDLNDFGTEAKWSSDDNSTFGEESSDFESEQNSKEKYAVIPKRVAVRPKKYNKRPKSSNVPVRMAREDIERRKAQQEEYDKILGRFYNNKFACPICNLFVRNFTEMVRHHRITHNIQGYMACCGRKFKQRKTLAEHALVHWNPDHFKCNICEKVFQNSRLLESHEQSHSSSGETRDKLIFQCDKCPKAFASKSTFDYHNLSKHVPKSEFKFSCTQCNKKLLTERKLKNHIKSAHDPENAIICDKCGKQMRTKHSLKKHQELIHSDVPRPEPVLMQCEICCTWLKDIRGLKQHMKSIHIESAGEHRCHVCNKVSPNARALRRHIYHNHECERKFKCTMCEKAFKRPQELREHTSTHTREVLYTCPNCPMTFFSNSNMYHHRKRLHPAEWEADRKKPNVTVMQRALESNNNEKICLNCWTIMSQFNSYYQRIYLAHCSSSYVEKNPLPQEVLIQSNPLVIVNNEIKAEVQDLEMLPKMEVLEDQVLNHETDEIMDHWPKREMATTDFLDNADSDSNMPLASYLPNSIDAGSSNSDLNRETDLIKKENENEWNMIWLTNNNDNDDEPKTNDGSSIGTDDEASSSSSECDSDANWSTTRGRVRYTQIKNSEKSRVSKTCKTGEKIVEQNGYDEIIDKIFKKLPCPKCDLLVCNFDDLKYHCRISHKMESGYIQCCSRRYFSKESLGVHALLHMNQEYSQIEEQKSTPHGYEEVIDKIFKKLPCPKCYLLVSNFDDLKYHCRISHKMESGYIQCCSRRFFSKESLGVHALLHMNQEYFQCNTCSRVFLDSQALYIHENTHTNAQDIKDKKPYQCDKCPRSFTTKQSLKNHSLTKHLPKSEYKFTCTECDKKFPTEWNLKVHMKNVHDPESTTVCDICVKEVRAVYLKRHHQTFHEQADIEHRCEICNKTSISADALKRHIYHYHQCERKLKCTMCDKAFKRPKDLREHTSTHTREVLYTCLNCPKTFISYSSMYQHRKRLHRAEVEGDQLLEDPNKHFIVNNEIKVEVQDLEMLPEMEVLEDQAVNHETDEILEHRPKTEISTTNFLDNVDSDSDIPLANYLPHRINAGSNNSDLIRGADLIKKENKSAFNMMWLANNNDNENEPKTNDGSSIGTDDDASSSNSECDSDSSWSTTRGRIRYTQIEKRKKPRVPKTCKTGEKIEEQKAKQNGYDEIIDKIFKKLPCPKCDLLVRNFDDLKYHCRISHKMESGYIQCCNRKICSKESLGVHALVHMNQGYFQCNTCSRVFLDSQALDIHENTHTNAQGIKDKKPYKCDKCLRSFTAKHSLKNHSLIKHLPKSEFKFTCSECNKKFPTERMLKIHIKKVHDPESATVCDICGKSLRLGNLKGHHQTFHEQAGIEHRCEICNKTSTSARALKRHIYYNHECERKFKCTMCDKAFKIPKDLREHTSSHTGEVLYTCPNCPMTFFSKAYMHKHRRRLHRAEWEADRMKSNVNLMQRSVDDTAAMDMNSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -