Cind009804.1
Basic Information
- Insect
- Cacoxenus indagator
- Gene Symbol
- -
- Assembly
- GCA_035041755.1
- Location
- JAWNKX010000242.1:6257024-6262030[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 26 0.0024 0.2 12.4 0.3 1 23 243 265 243 265 0.98 2 26 0.00025 0.021 15.5 1.6 1 23 271 293 271 293 0.98 3 26 0.015 1.3 9.9 1.1 2 23 321 342 320 342 0.97 4 26 0.00029 0.025 15.3 0.8 1 23 415 438 415 438 0.95 5 26 0.0027 0.23 12.2 0.9 1 22 445 466 445 466 0.97 6 26 0.00062 0.053 14.2 2.0 1 23 527 549 527 549 0.98 7 26 0.09 7.6 7.4 0.1 1 23 635 658 635 658 0.95 8 26 0.12 10 7.0 1.1 1 20 667 686 667 688 0.91 9 26 0.011 0.96 10.3 0.4 1 23 697 720 697 720 0.97 10 26 0.0031 0.26 12.0 0.1 2 23 736 757 735 757 0.97 11 26 5.1e-05 0.0043 17.6 1.1 1 23 764 786 764 786 0.98 12 26 1.8 1.5e+02 3.3 2.8 2 23 815 836 814 836 0.96 13 26 0.0057 0.48 11.2 0.4 1 23 924 947 924 947 0.97 14 26 0.0014 0.12 13.1 0.4 1 22 954 975 954 975 0.97 15 26 0.0076 0.64 10.8 1.2 1 23 984 1006 984 1006 0.97 16 26 0.00098 0.083 13.6 0.7 1 23 1019 1041 1019 1041 0.96 17 26 2.8e-05 0.0024 18.5 0.8 1 23 1048 1070 1048 1070 0.97 18 26 0.0019 0.16 12.7 0.1 2 21 1097 1116 1096 1117 0.93 19 26 0.0038 0.32 11.8 3.7 1 23 1161 1184 1161 1184 0.96 20 26 0.25 21 6.0 1.1 2 23 1222 1243 1221 1244 0.93 21 26 0.0017 0.14 12.9 5.3 1 23 1268 1291 1268 1291 0.98 22 26 5.5e-06 0.00047 20.7 0.2 2 23 1331 1352 1330 1352 0.95 23 26 0.012 1 10.2 3.5 1 23 1358 1380 1358 1380 0.98 24 26 2.8e-07 2.4e-05 24.8 3.7 1 23 1386 1408 1386 1408 0.99 25 26 1.9e-07 1.6e-05 25.3 2.4 1 23 1414 1436 1414 1436 0.99 26 26 0.0031 0.26 12.0 0.1 1 22 1442 1463 1442 1466 0.90
Sequence Information
- Coding Sequence
- atgcattccaataaaaaaacaattcctGCATTATGCAGAATATGTGAGGAGAACAGTTTGCTCTATTTTAAGCTGTCTACACGCCACGAAAAGCATCCAGACAAGTCTCTATCCGATCTGCTTTTAGAGTTGGCAAAAATTGATGTAACTGGTAAACAATCTGAAACGCTACCGCAGCAGTTGTGCGGAAAATGCACTCAGCAACTAAAGGACGCCTATGACTTCGTGGTCAAGGCGCAGCAGGCGCATCAGAGGTTTCTAGGGAAACTCCATGAATTTGGCACCAAAAGTGACACAGATTGCCTATTGGAAGCACCAATCGACATCGCTTCGCATAATTatacacaattaaaaatgGAATTTGATGTTGATGAACACACAGCGCTCCTTGAGGTTGCCAATCAAAATGAATCAGCGAAAGATGTTGAGAATGCAACGCCAAAAGAAGAAGGATTAGCTAAGGTGCACGAAGATCATGAGTTTCGCCCTAGTGATGCAAGCTATGATGGCAACAATGATATAGCGAATAGTTGCAACAATACAAATACTGACAgagaACAGTTGCCGCTAAAGCGCAAGCGTGGACGTCCGCGTCTTAAGCAAGTTGATCACTCAGAGAAGACGGATAAGGACGATAGTGGTGAAAGTGATAATGAAAATGTGACGGTAAAGCGGCGACCTGGACGTCCACGCATTTGGAAGAGGCATTCCAATGACGACGGACGCTACGTGTGTAAAGCGTGCGGCAAGAGCTTTGCTTGGCAAAAAGATGTTCAACGCCATGCGAAAAGTCACTCGTCCGAGGTGTTGTTCATCTGTGACTTTTGCGGCAAAGGATTTCAGCGCAAGGACAAATACGTTGAACACACGCGTAAACACCTTAGAAACAAAGACGTACGGAAGAAACGCCGTACGAACTTTGGCGAGCGTCTTTACACTGATAAGCGCTTTATACTGCTGGAGTGTAGGCTTTGTACCGTCACATTTGATACGATTCAAGATTTGCAGGAACATTTATGCACACATAAAGATGTACAGACATTGGAGTCATTAAGCATGGATAATGTCGTGTTGAAAGAGTTTTACGGAAGTCCCGATTTAACCATGGCACAAATCAAGGGGGCCATTTGTCAAGACATAGTAGCGTTAGCCTACAACAAATATTGTTTGGTACTTAATGAATTCGGCTACGAGATGAGCATCGATGACTCGGACGAAGAGTGCGTCAGCGGTGATGTGAAATACGTTTGTGAATTGTGCGGTGAAAACTTTACGCGGAAATATCAGACGTTGATGCACATGCAGGACAAGCACAAGCAGAACGCAATGCCGTATCGTTGCAATGTTTGTAAAATCTTCTTCATATCTCAGCAGTTGTACGAACAACATACACGAACGCAATGCCGCAATAGAGATAAAAAGTACAAGTGCCTGCATTGTCCTGGAAAGTTTATGTGGTCCCAGAATCTGGAGCACCATCACTGTTCTAGTAATGCGAAGAAACCCGACTGCGGTGACGTTCAAGAAGTCGTCAGGGAACCAATTGTAGATGAGTTCTCTGTCAGCAATAAGCGGCGATTTGAATGTGGCCTTTGTACGCATAGTTTTAGGTACCTAAAGTATCTGCGAGAGCACATCATGGTGCACCAGGATGGAAAAACTGAAGTTGACTATGAAGGCGGCATTTTCTTTAGGCTTCTTTGCACCGAAGGTGTGGCTGGACGCGAAGCTGAGTTGAGCAAACAAATTGCAGATGATTTTGCGGTTAAAAATTATTCCCGCTACTTTACAGCCCTCTCAGAGAGTGGTTATGAGTTGGATTTGTATGATTCAGAATCAACGATCAACGATGACTCCGAGCATGAAGGATACAAAGCCGATGCTAATtcacaaaagaaaatgtatgcTTGTGAAGTATGTGGCGCAAGACGTGAGCGTCGTACACTCATGCTCCGGCACCAACAGGCGGCACATGCTGAACAACAGCTCCAACTATCATACGCTTGTGACAAGTGCAGCAAACGATTTGTCTGCGCGGAATTGCTGGAGAAGCATAAGCTGCGCGATTGCCTAAATCGGTACAAGTCTTTCAAATGCGACAAATGCGATGAGCTCTTCGTTTGGCGTGCGAACCTCGAATCGCATTACAACATCAAGCACACAAACGCAGAACACAATTCCGAAGAAACACTGGCTAAGCAGCTGCAATGTGACGTCTGCGAAAAGTCCTACATATGGCCAAAGGATTTGGCGCGTCACAAACGTATACATTTGCCAGAGACCAATCGGTATGAGTGTCCATATTGCGAACGCAAATTCTTGCGTAAGGACAACATGCGTTCGCACATTAAAGTGCACAGCGAGGAGGCGAAACGTAATAGACCAGTCAAAGTGAAGGCGGTCGATGAGCAGCTTTGCAAGCCGCACGGTTGCAAGCGTATCGAATGCATGATTTGCCATACCATACATCGAAAAATATCAGATTTGCGTACGCATCTGAGTACACATAAATTTTCTGTGGCATTTCCAAATGCAACGGGTAACAACGAAGCCATTAAGGCTATTTCGCAGTTACTGTATCCGGAAGAAGAGCCTGCACTAAAGGAACAGCATCTGATCAAACGCATTATGTCGGACATTCAAGCAAAGCAATTCGATCGATTCTACTCGATTACAAATGAAGCTGGCTACGAGCTGAGCTTGGACAGCACAGAAACCGAAAGCGACTCGGACACAGAGGTGGACAAGGTCACGTCGAAGAGCCGTAAATATAACTGCGCACTGTGCGCCTGGGATTTTCAGCGAAAATACCAACTCTATGCGCATCAGCAGTCTGAGCATGTGTGGGATGAGGCGCTCTATACTTGTGGCCTTTGTCAGGCGCGTTTTATCAGCGAATCACTGTTGGAGCATCACACGCGCACCCTGTGCAAGAATACACTGAGACGTTTCATTTGCCGCAAGTGTCCGCAGCGTTTCCGTTGGAAGGAGAACTTCCGGGCACACGGCAACACACACTTCGACAACGTCGATTCGAAGCAGCCGAATACAACATACGAGTGTATCGAGTGCAATCGAGTCTTTCAAATGCAAAAGGATCTGACGCGTCACATGTTTGTGCATTCGCGCGATTCAGCAAATTTTGCCTGCCAATGGTGTCCGCGTAAGTTCTATCGTCGTGGAAATCTCAATCAGCACTTGGAACGACATGGCATCGCGCCTCATGAATTGGCCTATGCCGAAGCGCTGATCAATGTGCACAGATACGCCAATGGTAATAAGCTTATCATGTGCAAGGTGTGCAACATTAAATTCGAACGGCTTGCCGACCTGCGTGCCCATTTGCAAAGCTCAACTGTCACACACCACGACTACAAATCCATGCTGAATTACTCCATAACGAACCAATTGGGCTTTGAGTTGCACTTGGATGACTCGGAGACCGAGGATGAGTCGAAAGTGCCGGGCGTGCCAATGAGCTACACTTGTGATGTGTGCCTGCTGGTGTGCCGTCGTAAACATGAACTGTTTCGACATCAGCAAGCCATGCACAAGCTGGAAAAGATACAACTGAAGTGTCCACACTGTGTTTTCAAGAGTGTGTCTGCGGATATCATGACTTATCACAAGCTCACACAATGCGAAAACCAGGAAAAGAAGCTCACTTGCTCCAAATgccaattgaaatttatgtggGTAGAAAATCTGGCGAAGCATATGGAGCTCCATCACTCGAAAGCATCTGGTGATGATGCGCCTGTCTTGACAACTGGACTAACTGAAAATGACGCTAAGCCGATTTTCCAATGTCCACATTGTACTTGCAAGTATAATCGCAAGGATCGCTTGTCTGCGCACATCAAGAAAATCCACAGCGCCAAcggtgctgctgttgttgctaacAAAAAAGATGACGCCGGCACGTCGGGCCAAAGCGTTGCTGAGCCCACCGCAGAggagaaaatcaaaaaagccGACGGTAAGCGTTTTCTATGCGCCTTCTGTGGCAAAGCGGTGAGCTCCTCATCGAATCTCATCATACACATGCGTCGACACACCGGCGAGAAACCATTCAAGTGTGACTTTTGTGAAATGGCTTTCGCACGCTCCTCGGACATGCAATGCCATCGGCGTAGGCACACTGGTGAACGTCCGTACAAGTGTACCGTCTGCGACAAAGCGTTCTCGCGCTCCTACAAACTGCACCAGCACATGCGCATACATAACGGCGAGCGTCCGTATAAGTGTACCTACTGCGAGAAGAGCTTTACACAGTCCAACGATCTGACGCTGCATATCAGACGGCACACTGGTGAACGGCCCTATGTGTGCGGTGTCTGCGGTGAGCGCTTCATACAAGGCACCGCGCTCAAGAATCATCGTTTTATGCAAGGCCATATCGAAGAGAAcgcaacaacaccaactaGGCGCACTATACTCGAACAGTTTCGAGTTAGTTAA
- Protein Sequence
- MHSNKKTIPALCRICEENSLLYFKLSTRHEKHPDKSLSDLLLELAKIDVTGKQSETLPQQLCGKCTQQLKDAYDFVVKAQQAHQRFLGKLHEFGTKSDTDCLLEAPIDIASHNYTQLKMEFDVDEHTALLEVANQNESAKDVENATPKEEGLAKVHEDHEFRPSDASYDGNNDIANSCNNTNTDREQLPLKRKRGRPRLKQVDHSEKTDKDDSGESDNENVTVKRRPGRPRIWKRHSNDDGRYVCKACGKSFAWQKDVQRHAKSHSSEVLFICDFCGKGFQRKDKYVEHTRKHLRNKDVRKKRRTNFGERLYTDKRFILLECRLCTVTFDTIQDLQEHLCTHKDVQTLESLSMDNVVLKEFYGSPDLTMAQIKGAICQDIVALAYNKYCLVLNEFGYEMSIDDSDEECVSGDVKYVCELCGENFTRKYQTLMHMQDKHKQNAMPYRCNVCKIFFISQQLYEQHTRTQCRNRDKKYKCLHCPGKFMWSQNLEHHHCSSNAKKPDCGDVQEVVREPIVDEFSVSNKRRFECGLCTHSFRYLKYLREHIMVHQDGKTEVDYEGGIFFRLLCTEGVAGREAELSKQIADDFAVKNYSRYFTALSESGYELDLYDSESTINDDSEHEGYKADANSQKKMYACEVCGARRERRTLMLRHQQAAHAEQQLQLSYACDKCSKRFVCAELLEKHKLRDCLNRYKSFKCDKCDELFVWRANLESHYNIKHTNAEHNSEETLAKQLQCDVCEKSYIWPKDLARHKRIHLPETNRYECPYCERKFLRKDNMRSHIKVHSEEAKRNRPVKVKAVDEQLCKPHGCKRIECMICHTIHRKISDLRTHLSTHKFSVAFPNATGNNEAIKAISQLLYPEEEPALKEQHLIKRIMSDIQAKQFDRFYSITNEAGYELSLDSTETESDSDTEVDKVTSKSRKYNCALCAWDFQRKYQLYAHQQSEHVWDEALYTCGLCQARFISESLLEHHTRTLCKNTLRRFICRKCPQRFRWKENFRAHGNTHFDNVDSKQPNTTYECIECNRVFQMQKDLTRHMFVHSRDSANFACQWCPRKFYRRGNLNQHLERHGIAPHELAYAEALINVHRYANGNKLIMCKVCNIKFERLADLRAHLQSSTVTHHDYKSMLNYSITNQLGFELHLDDSETEDESKVPGVPMSYTCDVCLLVCRRKHELFRHQQAMHKLEKIQLKCPHCVFKSVSADIMTYHKLTQCENQEKKLTCSKCQLKFMWVENLAKHMELHHSKASGDDAPVLTTGLTENDAKPIFQCPHCTCKYNRKDRLSAHIKKIHSANGAAVVANKKDDAGTSGQSVAEPTAEEKIKKADGKRFLCAFCGKAVSSSSNLIIHMRRHTGEKPFKCDFCEMAFARSSDMQCHRRRHTGERPYKCTVCDKAFSRSYKLHQHMRIHNGERPYKCTYCEKSFTQSNDLTLHIRRHTGERPYVCGVCGERFIQGTALKNHRFMQGHIEENATTPTRRTILEQFRVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -