Basic Information

Gene Symbol
Trerf1
Assembly
GCA_035041755.1
Location
JAWNKX010000067.1:3921006-3930436[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.9e-09 5.4e-06 26.6 0.1 2 45 1796 1839 1795 1840 0.94

Sequence Information

Coding Sequence
ATGACAAAAAcgggagcaacaacaacaacaacaacgacggaGTTCTGTGATGCAAAGCAAGCAACGGTTCAGAAGAGCATTCATTTACCTTTGACGGGATTAGCTTCAACGCGCATGCAGCTTATGTGCAGCGCTTCTGTGGGcagcacaacagcaacagcaaacgcCACTGCTACCGTCACCGCCAATGCAACAAACGCCACCAACAACGCGACTACAACTTCTGCAAGCAGTTTAACGGTGCAGCAGCACCTCAGAGATGCCAGTACCTCAGACAGTCAGCAAAGTGCGACACCACCCACTGTTTCAGCCAATGGCATAGGCGTAGCTTCAACGCCATTAGAGAATGCTTTGACAGTCGGCTATCCGGATCCGGATATGTTAGCTGATGTACTGGGCACAATACAGACAGCTTCGCTCAGAAACAATCAAACTAGTACAACGACAGCAGCAGAGTCTACGGCGATAACGATTACAACAACgtcggcagcaacagcaactacatcagccagcagcagcagcagcaacaacaatgcgaataaaataacaataacacgaCGCAACACAACAGCGAACATCGCCAATCCCAGGGAGAACAGCAAAGTCTCAACTTCTACCTCGACGAGTACGAGCGTGGGtaatagcagcagcaataacagtGCCAGTGCTGGCGGCAGTACCAGCGGCGGTGGCAGCATCACCGGCAAAACCAACATCAGCTACATCAAGAACTGTCTGAtacgcagcagcagctgcagcaacaCTGCGACCAATGTCACGACGTTGGCACAAATAatgagcaacagcagcacgAGCGCCGCCGCAATTCTGAACAACgcgaacagcaacagcaactgcagcagcaacagcaacttcAGCAATTCCTCCTCCTCAGCAAGCAGCTGCTGCCTTAGTCTCAGCAGCAACGAGAGCACTCTAAGCTCGACGAGCAGCATCTTTAAGAGCGGCGGCAATGGTAAAACCATCGTTGGCAGCGCCATCACCATCAGCACCAGCAACGCCTCGACGAGCACAACGATCTCAGCAAGCTCCGCAGCGATCCTAAAGAAAAACCGACCCAAATTATCCTCACCGACGCGTCACGGACCGCAACAGTGTCAGACTTGTAGCAAAATCTTTGGAAATGCTTCAGCGCTTGCCAAACACAAATTGACGCACAGCGACGAGCGGAAATACATTTGTGCGCTCTGCTCAAAAGCCTTCAAGCGGCAAGATCACTTAAACGGACACATGATGACACATCGCAACAAGAAGCCCTATGAATGCAAGGCCGATGGTTGCGGCAAATCCTACTGCGATGCACGCTCGCTGCGCCGTCACACTGAGAACCATCACGCCGGTGTTGTGGCGCCTCAAAACCAAACACTCTCGCCGTCAACCGCTGCGTCCTCGAGCAATAGCATTGTTAGTGCCAACGGTGGTGGCAGCTTGAGTCTTTCGCCGGCTACGGCCAGTGGTGATGCCAGCTCACCGGATGGCGCCACCTGCATACGCACTTATATCTCATCGGGCGGTACCGTAGTAGACGCTGCCACTGGGATCGCACTCACCGAGGAGCAGATTAAGGCGATCAATCTACCCATCAAGACGGGTGTTTCGCTACTCTCGCCTACAACATCGACTTCATCGACCGCTTCGTCAACGTCGTCCTGCTCCACGAGCAGCTCGGTTGCTGTCTCGGCTGGTTCACCAACAATTACGCTCGCTGATGGTGCTACCATCGAAGGGGAGGGCTTAACCCGTGAGCAGCTAGATCTTATCAGCAAAATTATGCAGCAGACGAAGCAGACAAGCGCTCAAGTGACGGTGTCATCGCCAACGAGTGTCAACTCATACAAGATTAATACAGAAACAATACCAGCGCAGTCCACGGCCATGGTACACACCAGACCGCGCACCTGGAATATGCAGTTGCTGAACACCGCTCAGAACGTATCGATCACTGTCGATGACAGTACTGGCGAGTTGGTTGCTTCGTCGAATTCGCCAGTCGAGGGCAAGGACGATGAGCTCAGCCAGCAGTTGGTGGCCACAATTAATCCGCAGCTGCTGAACATTGTTAAAATCGACCAGAAACCGGTCGAGTGTAATCTCTGTCACCGTAAGTTCAAAAATATACCCGCCCTCAATGGGCACATGCGTCTGCATGGCGGCTACTTCAAAAAGGATCCTGAGACAAAGAAGAACGAGAAGAAGGAGTCGAACGGGCCACCACTGCAGACAGCAAGCATAGGCGTACGTGCCCTCATCGAGGAGAAGATAATCAGCAAACGCAGCAAAGATCTGAATAAGGGTGCCTTTGTAGTCCCTGCACCACCCGGTAGCATAGCAAACACAACCACCATCCGCCGGTCGATTAGCGACCTGGAAAGTTTTATGAATCCCAAGGCAAGTAGCGCTAGTATTTCCACAAATGCAGCTACGAGCACAACCACCACGCTACTGCCCGCCGCCACTACAATCAAGAATGGCAATGGGCTTAACATACAACAAGTCGGTTTACCACAGAGCATCGAAATCTTCAGCAGCAAACAACAGCAGTTCCAGCAGCAAAAGAGCGTCAGTGTGGGCACGGGTCCAAATACACTGACGATAACTACGAATAATATTGCCACCTCAGCGGCGGCCGCCATGAACACTCTAGCTGCAATGACCCAAACAACAACCGTCAAGAGTACAGCGACTGACCCGAAGGACTCGACGCTCATCGAACTGCTGAAGCGTGGCACACGTATAGCCGTCACTGCCGCCGCGAAGAAGACGCAAACCCAGACAAGTACAAATATGTTAATCAGCAGCTCCGATGGTGGTAGCAGAAGTGGCCATGCCACGCCCATCACGACAACCATGACAGGCCGGCAGATCATAACAAATAACAATCGCACTGTGATCATACCATCCGATGTGCAAGTGGTGTCCACCAAGAGCAAGGCAATCAGCACCATGTGCACCGCGACGCCAGCCAGTATCTCCTTGGCCGATGGCACGCCCCTCTCTCTAACAATTTCCCCCAGCAGCGACAGCAGCGGGGCAGACGTCTACACCGTGACGTATACCAGCGACTCAGCAGCGCTTTTCGAAGACGCTGAGGTCTACAATGTCTCGGACACAGAGATGCTGCTTCAAACCGTGGACACGATGGAGCTACTCAACGCCGCCGAGGAAGAGACCACGCAGATCAAAAGCGAACATTCCGAATACACTCTGCTCAGTGAGCCGGCTGACAGCACCGGTGCGATTAAAATCGAGACCGATTCCAGTTGCATTACAACCCATgacacaagcaacaacaacacaccaaacccaacaacaacggcaacaactgCTTTGCCAACTTTCCAACAATTCCATTCCAAAGAGATTATAATGCAAAATAGCTCGCAGATCCAAGCGATCACCAGTATGCGCACGAACACGCTCACGATGCCCGCCGACCTAAAACATCATATGGGCGTGTTGGCCTCTCCACTGCACTCCCCATTGGCGTACCCGACTCCACCTTCAAGCCACGAGAATGCCGCCCAATCCTCGCCCTTCATCGAGGATGGCCAGCAGTATCCAGAAGCGACGAGCGCCTTTTTCGACGACAAATGCACCCCTGACTTTACTAACGTGTATTTCAAGACAAGCGAGGAGGAGGTGGAGGAAGTGCTGACAGAGAACGAAAAGATCTTGAAGTTGAAAAGTGTGTTGGAGGAGAGTGCCTTTGACGGTTCTATCAAGGTTGAGGATTTGCTGAATAGCACAGGTGATGGCACAGAATGCGACCTTCGCGAATTCGCAGAGACAAATCTGTCCTTCCTAGATGAGGATCAGGAGTTCCTTAACGATTCGGGCAATGCAACTTCCCCATTGTCAGAGTCCTTCTTCACCAGCGGTATTGGATCAGCCGAGGAGGTCAAGGAAGTGCTGCGGGAGGTGTTGCCCGACGAGAGCATCCAGTTGACTTCAGAACAGCAAGGTGAGAATATTATAGATCTGTACTACCTGCCGGGGCTGGGGCTGCAGTCACAAATGATGCCCAATTCTGAAGACCCGCTTTTATCGTCATCGCCGCGAGAATTTGGTCAACAACGACAAGTGGGAATACCAcaattgcaacagcagcaacaacaagcggAACAGTTGAGTGGTATGGTATACACGCAGCAGAtgatgcagcagcagcaacagcagcaacaacaacagcaaccacagcaacaacagcagcttcaacaaattaatttacagCAGCCGAACCACGCAGACTTCATGGTAACAACCATGGCGCCGAATGAAAACAACACTGTCGTAGTCAGCAACCCAATGCAGATAAATTCGGTACAAAACTTGTTGACAGTGCAAAGTCAAACTCAGTTTGTCGATATTTCGAATTCGAATACGGCTGTGTTTAACCAGCACActggtaacaacaacaacaaccaccccGCCGCTTCCGATGTCATACAGCACATGAATACCATTGACGCTGCCATGATGCAACCCATAATTTATACTGAAACCGATGCCACCAGCTCCACTACCGGCGCCACcgataacaaacaaaatgtaacCCTACCTATGCAGTCGGCGACAGAAGTCAACTTTTTACCCCCTGACTTCAGTTCCTCCACTGAGCACCAGCCTACGCTGCCATTAGAGACACCCGGCCTCCATTTCAGTAGTTCGCTAGCCAAATCGTCGTTGATGACACCGTTGCCAACATACcaagaacagcaacagcaccagCAGACCACGACGATTGCCCCTTCTGCCGCCACATCCACCGTCATCACCACTTTGCAGCCGCtttcaaaccaaacaaattcCATACTCAAGCGAAGACTGCGCCAAAATGGATCTAGCGATGCCAACTCACAGAACTTCTCCAAATTCCATTCGCTCTCACCGTACCGCTCGAAACTGCGTAAACCCTCGCGCACTCATTACACACCCGCACCCATTCTCAACCCTGACCGCAAGGGCCTCGGGCTCTACTGCAAGGTACGTAAGGAACTCTCTCAGGGCATACTAACTTTTGATGCCTTCGACGATGACTTCGATGATCACATTGGTCTAGTTGACTTCTGCGACGAGTCAAAGGTTAACCTTGGTTCGACCTATCAAGCGCAAATACCCGCTTTTAGGGAAACCCCAATAGATGCATGCGCAATTGAGGAACCCGTGCGTGCCGAGCTGATGTGGAAACCTAGTGTCCAAACGGACgagaaaattttaatgcgcTACATTGACCTGAGCAAGTCCTCGGCGGTACCGCTGGGGAGCCATTCCGAGGAGGTTGCTCTGCAGACGCTGCTCAAAGCTGAGGGGAACTCTGCTGCCGCGGTACTGACGCTGCTGCAGATGCAGTCGAGCTCATTCCAAATGAAGTGGTCAGCCTACGAGCTGGAGGTGTTCCTGCGCGGACTTGAGAAGCATGGAAAGGACTTTGGCAGAATCGCAACGGAGTTGAATACGAAAACCACCGGGGAATGCGTTCAAATGTACTACTTTTGGAAGAAGCTCTGCGTCGACTACAAAGTTTCCCATCTGAAGGCGGAACCGGTCCAACAAGCAACCCCGGTCAGTGAGCTCAAGCCGTATGTCTGCGAGGTACCCGACTGCTCAGCGAGCTTCAGTTCCAAAGCTGCTCTGCACggacacacacgcatacacacctATGGCAGAAATGCCAATCAAAATACTAATCAAAACTCCAACTCCAAccacaacatcagcagcaacaacaacaatcccaacaatcacaacaaccacagcagcTCCCACAGCAATTCCAATTCCAGTGCATCGAATGTGGCAACATCGAACTACGCTTGCGCACAAACgctcaacaacagcaatggcGCCGGCAATAGCCACACGCAcagccacaacagcaacaacaacagcaaacttTTATACAACCATAATCCtagtaacaacaacactcaGATGAACATCAACAACACGGCCAACGGTGGTGCTAATGGTGGCACTGGTCCAAACTCAAAGGACCAGTTCAATAGCAATGGCAATGTCCAGCGTGAGGGCGAGTTTCCGTGCAAGGTGTGCGGCAAAGTTTTTAATAAAGTGAAAAGTCGCAGTGCGCATATGAAAACGCATCGTGTTCAGGATCCCGAggcgcaacaacagcaacaaatacagcagcaacagcagctacTACAAAAACAGCAGGCACAAGCAGCGACAACAGCGCAGCCGTCGTCGTAA
Protein Sequence
MTKTGATTTTTTTEFCDAKQATVQKSIHLPLTGLASTRMQLMCSASVGSTTATANATATVTANATNATNNATTTSASSLTVQQHLRDASTSDSQQSATPPTVSANGIGVASTPLENALTVGYPDPDMLADVLGTIQTASLRNNQTSTTTAAESTAITITTTSAATATTSASSSSSNNNANKITITRRNTTANIANPRENSKVSTSTSTSTSVGNSSSNNSASAGGSTSGGGSITGKTNISYIKNCLIRSSSCSNTATNVTTLAQIMSNSSTSAAAILNNANSNSNCSSNSNFSNSSSSASSCCLSLSSNESTLSSTSSIFKSGGNGKTIVGSAITISTSNASTSTTISASSAAILKKNRPKLSSPTRHGPQQCQTCSKIFGNASALAKHKLTHSDERKYICALCSKAFKRQDHLNGHMMTHRNKKPYECKADGCGKSYCDARSLRRHTENHHAGVVAPQNQTLSPSTAASSSNSIVSANGGGSLSLSPATASGDASSPDGATCIRTYISSGGTVVDAATGIALTEEQIKAINLPIKTGVSLLSPTTSTSSTASSTSSCSTSSSVAVSAGSPTITLADGATIEGEGLTREQLDLISKIMQQTKQTSAQVTVSSPTSVNSYKINTETIPAQSTAMVHTRPRTWNMQLLNTAQNVSITVDDSTGELVASSNSPVEGKDDELSQQLVATINPQLLNIVKIDQKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDPETKKNEKKESNGPPLQTASIGVRALIEEKIISKRSKDLNKGAFVVPAPPGSIANTTTIRRSISDLESFMNPKASSASISTNAATSTTTTLLPAATTIKNGNGLNIQQVGLPQSIEIFSSKQQQFQQQKSVSVGTGPNTLTITTNNIATSAAAAMNTLAAMTQTTTVKSTATDPKDSTLIELLKRGTRIAVTAAAKKTQTQTSTNMLISSSDGGSRSGHATPITTTMTGRQIITNNNRTVIIPSDVQVVSTKSKAISTMCTATPASISLADGTPLSLTISPSSDSSGADVYTVTYTSDSAALFEDAEVYNVSDTEMLLQTVDTMELLNAAEEETTQIKSEHSEYTLLSEPADSTGAIKIETDSSCITTHDTSNNNTPNPTTTATTALPTFQQFHSKEIIMQNSSQIQAITSMRTNTLTMPADLKHHMGVLASPLHSPLAYPTPPSSHENAAQSSPFIEDGQQYPEATSAFFDDKCTPDFTNVYFKTSEEEVEEVLTENEKILKLKSVLEESAFDGSIKVEDLLNSTGDGTECDLREFAETNLSFLDEDQEFLNDSGNATSPLSESFFTSGIGSAEEVKEVLREVLPDESIQLTSEQQGENIIDLYYLPGLGLQSQMMPNSEDPLLSSSPREFGQQRQVGIPQLQQQQQQAEQLSGMVYTQQMMQQQQQQQQQQQPQQQQQLQQINLQQPNHADFMVTTMAPNENNTVVVSNPMQINSVQNLLTVQSQTQFVDISNSNTAVFNQHTGNNNNNHPAASDVIQHMNTIDAAMMQPIIYTETDATSSTTGATDNKQNVTLPMQSATEVNFLPPDFSSSTEHQPTLPLETPGLHFSSSLAKSSLMTPLPTYQEQQQHQQTTTIAPSAATSTVITTLQPLSNQTNSILKRRLRQNGSSDANSQNFSKFHSLSPYRSKLRKPSRTHYTPAPILNPDRKGLGLYCKVRKELSQGILTFDAFDDDFDDHIGLVDFCDESKVNLGSTYQAQIPAFRETPIDACAIEEPVRAELMWKPSVQTDEKILMRYIDLSKSSAVPLGSHSEEVALQTLLKAEGNSAAAVLTLLQMQSSSFQMKWSAYELEVFLRGLEKHGKDFGRIATELNTKTTGECVQMYYFWKKLCVDYKVSHLKAEPVQQATPVSELKPYVCEVPDCSASFSSKAALHGHTRIHTYGRNANQNTNQNSNSNHNISSNNNNPNNHNNHSSSHSNSNSSASNVATSNYACAQTLNNSNGAGNSHTHSHNSNNNSKLLYNHNPSNNNTQMNINNTANGGANGGTGPNSKDQFNSNGNVQREGEFPCKVCGKVFNKVKSRSAHMKTHRVQDPEAQQQQQIQQQQQLLQKQQAQAATTAQPSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00251594;
90% Identity
iTF_00251594;
80% Identity
iTF_00251594;