Cind014542.1
Basic Information
- Insect
- Cacoxenus indagator
- Gene Symbol
- TRERF1
- Assembly
- GCA_035041755.1
- Location
- JAWNKX010000571.1:3296871-3297920[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-05 0.039 14.3 0.0 3 43 131 171 129 174 0.94 2 2 1.4e-05 0.016 15.6 0.0 2 45 289 332 288 333 0.94
Sequence Information
- Coding Sequence
- ATGGATCTGAAAGAAAAGATGAAAAAGTTAACTTTGAATAGCGGCGATCGCGTAAGCACCAATGTTGTCTTGGGTGTGGGTGAGCCCTCGCGTGATTTGCGCTCTAACAGCCGTGCGGACTGCAAGGCCCACGTTAACGTCGGGTCAAAATACCAGGCAGAGATACCTGAGTTTCAAACTAAACGCAAAGCCAACGATTTCGCTAACCGGGAAACTCTCATTTGGAAACCGGTTGAATATTTAACGGATAACGATAtcaatgtatttttaaaaaaagcacaGCAAATGCATAACTACACCATGGACCAAGCATTGACGTTCCTTAACTACTACGAGGGCAACGTTGAAAAGGCTGTAAATGCATTGCCGATATACAAACCGTGCGATGTCAAATGGTCGAAGGAGGAGAAGCAAATGTTTGACCTTGGCTTTTCGACATTTGGCACGaaatttgaactttttaaaTCGATGCTACCGGGCCGCAATATGGGTGACATACTTCAGTACTACTACGCCaataaaaattcgaagaaGGTGAGCCAAATGGATAAGGAAGCGGAATTACTGGCGCTTTCGTATCCAACACCGTCGTCGACCGCTGAGAAACACAAGCTCAGATCTTCGCAGGTTTACGTTTtgccaaagaagaaaaagatcaGTTTCACTACCGATGACATCGAAAAGTTCTTAAGTGAACTTCCAGCCACACCGAACATGAATATGACGCCGAAGATGACggagtataaaataaaagttacaaaGGCTAACAATGCCAAGAATGTAGAGTGTGTGGAAAAAATGTTGTCGAAATTGAACAATCGCGTGACCTTGGGCGAAATTGCACAACCGCGCGAAAAAATGTCGAAGCGTTGGAGTCAGGAGGACGTGGGAGTTTTGCAAATGTGTCTGCGTGATTACGGCACCGATTACAATATTATTGCTGGCATACTTCTGAGGAAGACGGCGGAGCAAATTAAGAAATACTGTGAGACTCATGGCTTCGTTGACATGAAGCCGAAACTTGAGATTAAAGATGAGGAGTCTGATTAG
- Protein Sequence
- MDLKEKMKKLTLNSGDRVSTNVVLGVGEPSRDLRSNSRADCKAHVNVGSKYQAEIPEFQTKRKANDFANRETLIWKPVEYLTDNDINVFLKKAQQMHNYTMDQALTFLNYYEGNVEKAVNALPIYKPCDVKWSKEEKQMFDLGFSTFGTKFELFKSMLPGRNMGDILQYYYANKNSKKVSQMDKEAELLALSYPTPSSTAEKHKLRSSQVYVLPKKKKISFTTDDIEKFLSELPATPNMNMTPKMTEYKIKVTKANNAKNVECVEKMLSKLNNRVTLGEIAQPREKMSKRWSQEDVGVLQMCLRDYGTDYNIIAGILLRKTAEQIKKYCETHGFVDMKPKLEIKDEESD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -