Cind009621.1
Basic Information
- Insect
- Cacoxenus indagator
- Gene Symbol
- SMARCC2
- Assembly
- GCA_035041755.1
- Location
- JAWNKX010000242.1:3654191-3658410[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.83 9.2e+02 0.3 0.0 33 44 202 213 199 215 0.89 2 2 9.9e-15 1.1e-11 44.9 0.2 3 44 649 690 647 692 0.95
Sequence Information
- Coding Sequence
- ATGAATACGCCCTGTCCTAAAAAGGATGGCAGTCCGAATGTAGAGTTTTACCAAGCACCAGAAACGTTGCAAGGTTTCGAATCGATACGCCAATGGTTGCAAAAGAACTGTAAGAAATATTTGGCGCACAGCTCGGAGCCAATTACCAAGGAGTCCCTATCACAATTGCTCATACAGTTTTTACAATATGTAGAGGCGAAATTGGGTAAAGCCTCGGTTGAACCGCCGGCAACGAGGATCCCGaTGCGCTGCTTCCTGGATTTCAAGAACGGTGGTGGTCTGTGCATAATCTTTTCGACTATGTTTCGTTTTCGGGCCGAGCAACgtggaaaaaaatttgatttttcaattGGAAAGAATCCAACACGCAAAGATCCAAATGTACAATTGCTAATTGAGATCGAACAAGCCTTGGTTGAAGCGGACTTGTATCGCATACCCTACATCTACATACGGCCGGAAATTGAGAAAAGTTTTGAGTCCCGCCTACGTGAAATACTGGACAATAGACGCGTAGAAATTGTGTCGGATGAGGAAGATGCGACTCATATTATTTACCCCGTTGTGGATCCACATCCAGATGAATATGCACGTCCAATATTCAGGCGTGGCAATCACGTTATGCTGCATTGGTATTATTTCCCAGAATCGTATGATACATGGACAGTAAATTCGTTTGATTTGCCGGAAAACATACCAGAGAACCCAGAATCTCCTGCCGAACGTTGGCGCGTATCGGCGTCTTGGATTTTAGATTTGGAGCAATACAACGAATGGATGGCTGAAGATGATTACGAGGTAGATGAAGTagggaaaaagaaaatgcataAGCAGCGTTTGTCCATTGATGACATTATGGCTTATGGTGACGAGAAGAAGAAACCAAGCACGGGCAGCAGTAAGCAAAAGAGACGGCACTCACCATCGCCGACGAGCTCAAGACCTGGTAAGCGTAAACGTTCGCCAGCCGTGCTACACAAGAAATCGAGGcaagacgatgatgatgaagatctTACGCGTGACATGGATGATCCGCCTGCGGAGCCGAATGTCCAGGAAGTCGTCAAATCGACTGCGGCATTACAGTCGACTGCTAGTCCTGCACCAGGTACTAAATCACGTGCGGATAACGATATGATGCCGATAAAAGGCGGTACAATGACCGATCTCGACGACGAAATGACAGGCGGAAGCGCGGTTCACGCACTCTCCACATGCGATGGTGAGAATTCGCAAACTGGAAAAACTAGTGACAACAGCAATACGCAAGAGTTTTCTTCCTCAGCCAAGGAAGATATGGAAGACAATGTCACTGAACAGACACATCACATAATTGTGCCTTCATATTCAGCTTGGTTTGACTACAATTCGATACATGTCATCGAAAAGCGCGCAATGCCCGAATttttcaacagcaaaaataaatccaaGACACCAGAGATTTATATGGCCTATCGCAATTTCATGATTGATACTTATAGATTAAACCCTACTGAGTACTTAACCAGCACAGCCTGCCGCCGAAATCTTGCGGGTGACGTTTGCGCAATTATGCGTGTACATGCTTTTCTGGAGCAATGGGGCTTGATTAACTATCAAATCGATGCCGATTTGCGGCCAACACCAATGGGACCGCCACCTACTTCACACTTTCACATAATCTCGGATACACCATCAGGCTTGCAGTCGCTGAATCCACAAAAGACGCAACAACCCTCAGCCGCAAAGACGCTACTCGACCTCGATAAGAAACCAATGGGCAGGGATGGTAAAGAGGGTTCAGTGGAAGCAGATAAGCCAGGCACATTGCCAGGTATTGGTATAAAAACAGAGAATCTTGAGAATGGCGCTACATCAACTGCCGGTCAGTTTGGGCTTAAGTTGGATCAATATACTAAAAAACCAGCAGCCATGAAGAATCGCACGGCGGCGAGCATGTCACGCGAATGGACCGATCAAGAGACATTGCTGCTACTCGAGGGTTTGGAAATGCATAAAGATGACTGGAACAAAGTATGTGAGCATGTGGGGACGCGAACGCAAGACGAATGCATATTGCACTTTTTGCGTTTGCCAATTGAGGATCCATATCTTGAAGACGATGGAGGTTTCTTGGGTCCATTAGGTTGTCAACCTATACCTTTCAGCAAGTCGGGTAATCCAATTATGTCAACAGTGGCATTTTTGGCTTCCGTTGTGGATCCACGCGTAGCAGCGGCTGCCGCAAAAGCAGCCATGGAAGAATTCGCTTCTATCAAGGATGAGGTACCTGCTGCCATAATGGATAATCACTTAAAGAATGTCGAAAAGGCATCGGCCGGTGGCAAGTTTAATCCTAATTTCGGGCTATCAAACAGTGGTATTGCGGGCACTGGCAATGAGAAGGATGACGAGGACGGTGGTGGCAATGCTGGAGCAACTGGTGCATCAACAGACGAAGAAATGAAAGATATATCCAAGAAAGATGacaagagcaaaaacaaagacaaatcTAACGTGGACGCAGCAACAGACATCAGTTGCACAAACACCAATAACTCCAACTCGACAACTGAAAAACGAGCATTAAATGAAGATCATAATAATGCCAGCACAACTTCTCCATCAAATAAAACCACTAATTCCTCCTCCAACGCAGAGCCCGCAGGTGCAACTACAGTGGCGACGAATGCAGTCGCAGGGGCGTCAgaccagcagcaacagcaggaGGTAAAAACCGAGGATAACAGTAGCGGTGACGGTGATTCCAATACGAAGGATAGCGATGCGCCTAAAACGGCATTCACTGAGAGCAACATGCAAACAGCTGCCGCGGCGGCTTTGGCCTCGGCCGCCGTGAAGGCGAAGCATTTAGCTGCATTGGAAGAGCGTAAAATAAAGTCACTTGTGGCTTTGTTGGTCGAAACGCAAATGAAAAAACTGGAAATTAAATTACGCCACTTCGAAGAGCTTGAAGCGACCATGGAACGAGAACGTGAAGGACTCGAATATCAACGTCAGCAACTGATTACGGAACGTCAGCAATTCCATTTGGAGCAGCTGAAAGCTGCTGAATTTCGAGCACGGCAGCAGGCGCACCATCGACTGCAACAGGAACAGCAGGCAGCTGGTTtaatgcagcaacaacaacaacaacagcagcaacaacaacaaccaccgcCGCCAGGTCCTCAATTGCCAACGCATAGTGGCCCAGCGCAACAAATGCCATCTAATGGGCCACCTGGTGGCCCAGGGCCAGCTGGAGCAACTGCTGCTAGTAATACATCGGTTATATCCACGCCGCCAGGGGTGccctcacaacaacaacaaacgaccGATACCACACCACCATCAACGAATGCACCGCCTGCACAACCGCCTGCTGCTGCCAGTGATGGTCCACCTCTTGGCGCAGGACATCCAACGGCACCGCCACAAACAAACGCTACACCGCCCGTTCTGCCCACCATTCCAGCAAATATTGGCCAAGCTCCACCATCCTAA
- Protein Sequence
- MNTPCPKKDGSPNVEFYQAPETLQGFESIRQWLQKNCKKYLAHSSEPITKESLSQLLIQFLQYVEAKLGKASVEPPATRIPMRCFLDFKNGGGLCIIFSTMFRFRAEQRGKKFDFSIGKNPTRKDPNVQLLIEIEQALVEADLYRIPYIYIRPEIEKSFESRLREILDNRRVEIVSDEEDATHIIYPVVDPHPDEYARPIFRRGNHVMLHWYYFPESYDTWTVNSFDLPENIPENPESPAERWRVSASWILDLEQYNEWMAEDDYEVDEVGKKKMHKQRLSIDDIMAYGDEKKKPSTGSSKQKRRHSPSPTSSRPGKRKRSPAVLHKKSRQDDDDEDLTRDMDDPPAEPNVQEVVKSTAALQSTASPAPGTKSRADNDMMPIKGGTMTDLDDEMTGGSAVHALSTCDGENSQTGKTSDNSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADLRPTPMGPPPTSHFHIISDTPSGLQSLNPQKTQQPSAAKTLLDLDKKPMGRDGKEGSVEADKPGTLPGIGIKTENLENGATSTAGQFGLKLDQYTKKPAAMKNRTAASMSREWTDQETLLLLEGLEMHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFASIKDEVPAAIMDNHLKNVEKASAGGKFNPNFGLSNSGIAGTGNEKDDEDGGGNAGATGASTDEEMKDISKKDDKSKNKDKSNVDAATDISCTNTNNSNSTTEKRALNEDHNNASTTSPSNKTTNSSSNAEPAGATTVATNAVAGASDQQQQQEVKTEDNSSGDGDSNTKDSDAPKTAFTESNMQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQEQQAAGLMQQQQQQQQQQQQPPPPGPQLPTHSGPAQQMPSNGPPGGPGPAGATAASNTSVISTPPGVPSQQQQTTDTTPPSTNAPPAQPPAAASDGPPLGAGHPTAPPQTNATPPVLPTIPANIGQAPPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00890061;
- 90% Identity
- -
- 80% Identity
- -