Cind002527.1
Basic Information
- Insect
- Cacoxenus indagator
- Gene Symbol
- ttk
- Assembly
- GCA_035041755.1
- Location
- JAWNKX010000167.1:2231054-2234662[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-19 5.2e-16 58.3 0.0 2 45 575 619 574 619 0.97
Sequence Information
- Coding Sequence
- ATGTCCatgcaacaattttgtttgcGTTGGAACAATCATCAGCCGAATTTCATTTCGGTCTGTTCGTCGCTTCTGCACAATGGCACACTGGTGGATGTTACCCTCGCGGCCGAGGGACGTCAGCTTCAGGCACACAAAATTGTGTTGTCAGCGTGTAGCTCATATTTTCAAaCTCTCTTTACAACGAATCCGTGCCAGCATCCGATTGTCATATTGAAAGATGTCCAGTACGACGATCTCAAGACAATGGTCGATTTTATGTACTATGGCGAGGTGAATGTGTCACAAGAGCAATTGCCACACATACTTAAAACGGCTGAAATGCTTAAGATAAAAGGTCTTGCCGAGATGCCCACCGATCCGGCCAATTTGACTAAATCGGATAGCAAATCATCGAACGAAGGCACTGAGCTTGTTGGCGGTGCGCCACAGAGTGGCGCCAATGCACCAGGTAGTGTTGGAGGACTGGGTAGCAGTACAAGTGGCAGTGTTAGTGACTCTCTCTGGGGCAGTACCGAAGCACAGtttcaagcacagcaacaagcCGCGgcacaacatcatcatcatcaacaacaacaattacaacaacaacaacaagctgctgccgccgcacaacaacaacaacaacaacaagcggctcaacagcaacaacatcatcatcatcatcaccaccaccagcaacaAGCCAATagccaaacacaaacaacacaatcgCATCATCAATTGAGACGCACACCATCCCCATTGGGAGCAGGTACATCGCCTGCTACACGTCGAAAACGTTTGCGAAAATCCTCAAATAACGGTTCCGGTGATCGCATTAATTCTGAAGATCAGCATGGCTCATTAGACGCAACTAATACTTCAGGTGGCATTAGTCTCTCACAGATGAGTCAAATGTCCTTTGGCACTGGCGGTGGTGGCACCCTTGGCAGTCTTGCTGGACACTCACTTCATACAGCTAAATTGTTAAAGGAATCGACAAACGCTGAATTAGAACAACACCCACAGGATTCTGATCTGGAAGATGGACACggacacatacacatgcaaatCaaaCCTGAAGTTGATATTGGCGGTGTAAGTCAATCGTTGCCCTTGGACATTTCTGGTGCTACAACACCATCTGAGCACGAGGCACCAAATTCGCAGTCATCACACTCAGGTCTGCAATGGACAGTTGTTGATTCAAGTTATTCGCGCTTTTCGCTGCCCTCATGTCAATCAAATTTGATTGGAAACGGCAGTGGTGGCAATCAGAATGCTAACAACGGTGGCGCAGCTGGCAACAGTGGTGCTgatcaacgacaacaacagcccCAGGATGCACAACATGCAGCGAAcagtcagcagcaacaacaacatctacAACAGCTTCAACACTATCAGCAACagacgcaacaacaacagcaaaatgcTGCGGGCACATCATACTCATCACAGATCATTACGGTTAATAACCTAGTCAGCGGCTATACAACAGCAGCACAAAATCTATCGCCCACATCACCCAATGAATCGAACATGGTGCAATCGGTCTATAGTCAGGGACCATCACCGACACAATCACCCGTACATTCGGCCATCGGTGGCAGCAATAGCAGCGCCGCTGGTTCGGGTTCAGCCGGTGGTGTTGGGAGTAATGCGGGCGGGGCCAATAGCAGTAGCACAACGACTGGCACACAGGTGGTGAAGCGTAAGCGTTCAGTTAATCCACAAGGTGATGAAAACTTTATACGTGCACTGGAGGCCGTTCGTTCTGGTGGCATTGGCTTTTGTAAAGCAGCCCGTTTGTATGGTGTAAACAATCGAACACTATGGTTGGAGTACAAGAAACGTGGCTATCCGGTTTCGAGGCCGAGCATAAAGGCTCGTGTTGTCAAACAGGAACCAAATTTGTCACCTTCACCGACGCCACCAACCACAACCGGTGATGACGCTACGAATGAGAATTACGAACTTTTAACAACGGCAGCGGTGGCGGCCGCTCAAACGGTTGCGCTAAACATGCAATTGCCTCCCCAATCGGAAACGCCAACACCATCATTGATGTGCGCACCACATCATGCATCGGCGTCCGGAGCGGCAGCTGGCACTGGGAATGCTGGGGCACACCCCACAATGGGCGTCATGAATTTCCTCGACACGCGACATATGGACTTTCCCGCCAGTCTGCATACGATGTCCCGCCAACGTTACATTGATGCGACAGGTGCCGGTGGTGGTGCCACATCCGCCGGTGCGGGCACAATCAACGTCAATCCCGCAGCGGCAATGAATCTACAAAGTATTAATTTCAACGCAATATAG
- Protein Sequence
- MSMQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQTLFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDSKSSNEGTELVGGAPQSGANAPGSVGGLGSSTSGSVSDSLWGSTEAQFQAQQQAAAQHHHHQQQQLQQQQQAAAAAQQQQQQQAAQQQQHHHHHHHHQQQANSQTQTTQSHHQLRRTPSPLGAGTSPATRRKRLRKSSNNGSGDRINSEDQHGSLDATNTSGGISLSQMSQMSFGTGGGGTLGSLAGHSLHTAKLLKESTNAELEQHPQDSDLEDGHGHIHMQIKPEVDIGGVSQSLPLDISGATTPSEHEAPNSQSSHSGLQWTVVDSSYSRFSLPSCQSNLIGNGSGGNQNANNGGAAGNSGADQRQQQPQDAQHAANSQQQQQHLQQLQHYQQQTQQQQQNAAGTSYSSQIITVNNLVSGYTTAAQNLSPTSPNESNMVQSVYSQGPSPTQSPVHSAIGGSNSSAAGSGSAGGVGSNAGGANSSSTTTGTQVVKRKRSVNPQGDENFIRALEAVRSGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKARVVKQEPNLSPSPTPPTTTGDDATNENYELLTTAAVAAAQTVALNMQLPPQSETPTPSLMCAPHHASASGAAAGTGNAGAHPTMGVMNFLDTRHMDFPASLHTMSRQRYIDATGAGGGATSAGAGTINVNPAAAMNLQSINFNAI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01195356;
- 90% Identity
- iTF_00251423;
- 80% Identity
- iTF_00251423;