Cpus035915.2
Basic Information
- Insect
- Cabera pusaria
- Gene Symbol
- nfxl1
- Assembly
- GCA_954871355.1
- Location
- OX940908.1:1742603-1743943[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 3 5e+04 -6.9 5.6 15 19 134 138 133 138 0.81 2 12 0.0081 1.3e+02 4.1 0.3 4 10 169 175 168 176 0.97 3 12 9.3e-08 0.0015 19.9 14.4 3 19 186 202 185 202 0.95 4 12 2.8e-07 0.0046 18.4 14.5 1 19 237 255 237 255 0.93 5 12 0.99 1.6e+04 -2.6 1.1 6 10 280 284 279 284 0.83 6 12 2.5e-07 0.0041 18.5 12.0 1 19 290 308 290 308 0.99 7 12 1e-06 0.017 16.5 16.8 4 19 346 361 344 361 0.93 8 12 0.86 1.4e+04 -2.4 0.5 7 11 365 369 365 369 0.87 9 12 2.9 4.8e+04 -4.1 0.2 1 5 370 374 370 374 0.85 10 12 3 5e+04 -4.4 2.2 5 10 384 389 384 389 0.88 11 12 6.3e-06 0.1 14.0 18.7 1 18 395 412 395 413 0.97 12 12 1e-06 0.017 16.5 16.0 1 19 422 440 422 440 0.93
Sequence Information
- Coding Sequence
- ATGGCGCGACGGTACCGCGACGCCGCTGCGAAATTGCAAATAAACGTGCAAAAGCATCTAAAAGAAATGGAACATCTATCGTCTTCGGAAGACGAAGAGCCGTACGAACCCAGCGTTTTAGAAGGTGTGTTCCAGAGTTACTGGCGAGGAGGTGGGGACTCGCACATGCTGAATAGAACCAAGAATCTAGTAGAGGAAGCTCTGAGCGGTCGTGGCGTTACCTGCCTCATCTGCATCGCTTCCGTGAAGCGGGAGCACGCCATCTGGACCTGCGACCACTGCTACTGCTACTTCCATCTCTCCTGCATACAGAAGTGGGCCAACGACAGCATCAGTCTGCGCAGCGAACAGAATGACGCCCCGGTGAGAGTAGTCGTGCCGACCAAGATAGAGTGGTGCTGTCCTAAATGTAGACAGGCATATAATAAAGACCGGATACCGCGTAAGTACACATGTTTCTGTGGAAAAACTGACAACCCACCTGTACATCCCTGGCAGATTCCCCACACCTGTGGCGAAGTGTGCGGTAAGAGATTGTCGTCTGGAAACAACTGCATGCACAAGTGCTTATTACTCTGTCATCCTGGTCCGTGCCCTCCCTGCCCACAGACCGTCAACGGTACATGCTACTGTGATAAAGAGCACAAGAAAGTCAGGTGTAGCTCAGCCAAATGGTCCTGTGGGCAACAGTGTATGAAAATTCTTCTCTGCAACACTCATAAGTGTAAAAATGAATGCCACGATGGGGAATGTCCTCCCTGCAGCTACACTAGCGTTCAGCCCTGCCAATGTGGAGAGGAGAAGTCCAAACGCCCCTGTAATGACCCATTCTGGCAGTGCAGCAGACCATGCAACAAACCTTTCTCATGCGGGTATCATAAATGTGAAACAGTTTGTCACTCCAGCTCATGTGGCTCATGTCCCAATTCAGGAATGAGGTCCTGTCCGTGTGGTGCTGATCAACGCTTTGTCCAATGTCCCGATACCATGGAAACATGCTTAGGAACCTGCAGTAAAAAGCACGAAGACTGTGATCACACTTGCCCAGAAAAGTGCCACAAAGGCCCGTGCTCCCCGTGCCAGGTTCTCATACAGAAGAAGTGTCATTGTTCGAGTCACACTCGCTCACTTCCATGTAGCAAAGAGTTTAAATGTGAAACTAAATGCCGCGGAACTAGACCTTGTGGCAAACACGGCTGTGCAAAGAAATGCTGCAACGGGAACTGTCCACCATGTGAAAAAACTTGTGACAAACCTTTACAGTGTAAACGACACAAATGCACCAATATCTGCCACCACGGTCCCTGCTATCCTTGTCCTCTAGAGTCCAAAGTGACCTGA
- Protein Sequence
- MARRYRDAAAKLQINVQKHLKEMEHLSSSEDEEPYEPSVLEGVFQSYWRGGGDSHMLNRTKNLVEEALSGRGVTCLICIASVKREHAIWTCDHCYCYFHLSCIQKWANDSISLRSEQNDAPVRVVVPTKIEWCCPKCRQAYNKDRIPRKYTCFCGKTDNPPVHPWQIPHTCGEVCGKRLSSGNNCMHKCLLLCHPGPCPPCPQTVNGTCYCDKEHKKVRCSSAKWSCGQQCMKILLCNTHKCKNECHDGECPPCSYTSVQPCQCGEEKSKRPCNDPFWQCSRPCNKPFSCGYHKCETVCHSSSCGSCPNSGMRSCPCGADQRFVQCPDTMETCLGTCSKKHEDCDHTCPEKCHKGPCSPCQVLIQKKCHCSSHTRSLPCSKEFKCETKCRGTRPCGKHGCAKKCCNGNCPPCEKTCDKPLQCKRHKCTNICHHGPCYPCPLESKVT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -