Basic Information

Insect: Cabera pusaria
Gene Symbol: -
Assembly: GCA_954871355.1
Location: OX940895.1:3861402-3878125[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.5 2.2e+02 4.0 0.3 2 23 6 27 5 27 0.96

2 14 0.0029 0.42 12.6 0.2 1 23 1026 1049 1026 1049 0.92

3 14 0.96 1.4e+02 4.6 0.1 1 23 1121 1143 1121 1143 0.95

4 14 1.9e-05 0.0028 19.4 3.2 2 23 1146 1167 1145 1167 0.97

5 14 0.0001 0.015 17.2 1.9 1 23 1173 1195 1173 1195 0.98

6 14 0.0089 1.3 11.0 5.9 2 23 1202 1223 1201 1224 0.95

7 14 6.8 9.9e+02 2.0 1.6 5 23 1237 1255 1235 1255 0.96

8 14 0.00085 0.12 14.2 2.6 3 23 1262 1283 1261 1283 0.97

9 14 0.028 4.1 9.5 0.2 2 23 1300 1320 1299 1320 0.96

10 14 5.4e-05 0.0077 18.0 0.7 1 20 1326 1345 1326 1348 0.92

11 14 0.0022 0.32 12.9 0.5 1 23 1356 1378 1356 1378 0.98

12 14 0.014 2 10.5 7.3 1 23 1384 1406 1384 1406 0.98

13 14 1.1e-05 0.0015 20.2 1.5 1 23 1412 1436 1412 1436 0.97

14 14 0.001 0.15 14.0 5.1 1 23 1442 1464 1442 1465 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.5	2.2e+02	4.0	0.3	2	23	6	27	5	27	0.96
2	14	0.0029	0.42	12.6	0.2	1	23	1026	1049	1026	1049	0.92
3	14	0.96	1.4e+02	4.6	0.1	1	23	1121	1143	1121	1143	0.95
4	14	1.9e-05	0.0028	19.4	3.2	2	23	1146	1167	1145	1167	0.97
5	14	0.0001	0.015	17.2	1.9	1	23	1173	1195	1173	1195	0.98
6	14	0.0089	1.3	11.0	5.9	2	23	1202	1223	1201	1224	0.95
7	14	6.8	9.9e+02	2.0	1.6	5	23	1237	1255	1235	1255	0.96
8	14	0.00085	0.12	14.2	2.6	3	23	1262	1283	1261	1283	0.97
9	14	0.028	4.1	9.5	0.2	2	23	1300	1320	1299	1320	0.96
10	14	5.4e-05	0.0077	18.0	0.7	1	20	1326	1345	1326	1348	0.92
11	14	0.0022	0.32	12.9	0.5	1	23	1356	1378	1356	1378	0.98
12	14	0.014	2	10.5	7.3	1	23	1384	1406	1384	1406	0.98
13	14	1.1e-05	0.0015	20.2	1.5	1	23	1412	1436	1412	1436	0.97
14	14	0.001	0.15	14.0	5.1	1	23	1442	1464	1442	1465	0.95

Sequence Information

Coding Sequence: ATGGATCAGTTAGTGCAGTGCCCCGTGTGCACGCTCTTCCTCCACAATGGAATGTCCCTTGAGTCGCATCTGGACACGCATCCCAAAGATCAGGTTATCAAAGCTCTCTGCAGCATAGCAAATAAGAGCAGCTGTGCTAGCAGTAGAACTTCCACTCCCGCTAATTCCGAGAGATCCTACAGAAGTAGGTCGCAGACTCCTGTCGCCGAGGACAATGGACGTTGGAATGGTGCTAATAGAAACTCTGAACATGATCGCTACTGGTCGAGAACTCCCAGCGGTAACACCAGCCGAGCCCCAAGTGGCTCGTCTAGCCAAGCCCCCAGTAGAACACCGAGTAGAACTCCAAGTAGAACACAGAGTAGGACTCCGAGATCCACTTCATCTGCCAATGTTTCACGAAATTGCACTCCAGATATCAGATTGATAGATAATATCAGATATGAAACCAGTACTCTGAGCGGATCATCTCAGCACTCACACCAGTCCACTGTTTCCAATCCACCGCTGTTACTAAAGGCTGATAAAACGCAGCAGACGTACAACCCTCCGTTGATCGTAGACTTCGAGCCCAAGTATGTATACTGTCCAGAACCACAGGAGGACAGAGAGGTGAAATATTCTCGCAGCGCCGAGTACAATGCCATGGAAGTTAATAATGGGTTTTCTTACAATATTCCACCTGTTACGACTGTTAAGTTGCAGCCCAATTTGGTTTCAAGTGGACCCAGGAAGAGAAATGATCCTCCTAAAGTGTTGCCAAAAACAAATAATCTACTTAATCTAGTTAAAAACAATGTGGGAACACTACCATACTTGGCTCCGAATGTGAAACCTGTGCACGTAGTATTGGGACCGTCAGCACCAACCTTTGTTCACAAGAATGTGCAGAACAGTATGATCATGACAGGTGGTTTGCCGACCACTCAAGTTCATATTGATGCTAAAACGGTTCCTCCGTTAGTTCAGAATCACTTCAACCAGCTCAGTACAAGTTCTTTTACCCCTGGGACCACAGTAGTCACTCAGAATTCTCAATACTTCTATCAGGAGATGGTGCAAAACATTGATCCCAAGAGCTTTATTCCCACCATACCTACAGTGTTCACAGGAGAGAATGTGACAAACGTAGCTCAAACTAGCTCCGTGTACCAAAACTTGATGCTGGTGGACCAATTTGGTAACACTTCATGTATGTACACAACACCTCAGCAAATTATTCCTAAACAATGTGGCACTCAAATATTCCCCGAGGCCACTACCATTCTAACAAATGCACAAAAACCGGGGCCCACTCTGAATGATCAGAATAAGACTCTGATTATTGAAGTAGGACCAATGGTGCCCAGTGTAGCATTGAGTTCCTGTAGTAATACAGCTAGTAAGGTATTGTCTAGACCGCCACGCCCAATGCCCGCTATAGTTCCCAACTTTACTCTGCCAAAGGCCGAGGCTCCCAGTGTTACCATTACTGAAAAAATGGACACCCAAGGTGAAGTCACTGGCACCactaaaggtcttaaaattctCAGCAATATAAAAGTGGAAGTACCGgtacaacacaataaaaatatgatcaACACTGTGATGGACCTCACAGGTTCTAATGATCCAGAATATCCCGAGAGATCTATATCTCCTGAGAAAATTTACATCGAGGAGCACAACCCAAAGTCTATTCAAGATTTCTCTCAACCCTCTACGAGTAAAGGTGATACCTCAATAGGTTTCATGGAGCTGAAAAAGATAGCCAGCCCTACCTCAAGCAAAGACTCAACTAGCAAAACTATTAGCGTAGATAATAAGGTAGATATGGAGTTCGGAGACAGCTGTCAGGTGCTAGATCTAATTTGTAACGAGAAGCCTTCCATATCTCCGATCAGCGAGCTATCGGAGAGCGGAGACAACTCCACCGATCGCACTTCCAAATCTCCCAAACCTCAGGCTAAGAAAACTATAAACGATGTAGATAGTAAAGAAAAGATAGTTCAATTGCCAATAAAGCAGTTTAGGAACACCCCACTAAGACTGAATAATATTTACGTGAGAAAGAGTAAAAAGGTTCTGCAGATAAAGAATTTGAAGTCTATCACGGAGGGTGGGCCGATCGGGCAGCAGGCTGAGCCTGTGCCGTGTACATCGACGAGTGCGGTGCCCTCATTCGCGGGTCAGGTTGAAAAGACGGAGATAGTTCCCAAGTCCATGTTGAAGACGATTTCCATAGAAGAGATAAAGGAGAAAGACGAGCTGGCGGGGTTTGGAGGGGCGAACCGCGACGCCGCGGAGCCTGCGTCTGCGGTGAAGAGCGGGTCGGCGCGCCCCGAGGTGGTGCAGGTGAAGGAAGAGCTCAGCTCCAGTAACGAGGGGGCGTTCGGCGGCGACGGACGCGCCGACGACATGACGCCGCTCGATCCGCTGCGGCCCATCAACGTCGTCAGCTACGGGAACATGTCGCCGCCGGACTTCGACGAGGAGTCGAGCCACCGGGAGCTGCTCGATCTCGAGGGCGCGGGGAAGACCAAGCAGTTCGTCAACTTGATCAACGAAAACTACTTCGGCGATAACAACATCTACGCGGACTACTTCACGGCGGAGCGCGAGGTGTTCGACGACAAGGGTCCGCCGGTGTTCAAAGACAACGCGAAGGAGGCGTTCTCCTGCAACATCTGGGGCGAGCCATCACATAAGGAGAACGAGTTCGTGTTGCCCAACTTTATTCATGAGAGTTACAAGATCGCGGAGAATGGGATGGATTacgagggggagagggatgagTTGCAGGGGGAGGCGGGGGAAAAGGACTGCAAGGCGGACTTGCTGAGCGAGAGCCGCAGTGAAGGGGAGCCTACCCTCAACATCTGCACGGACGAGCGCATGCCGCCACGCGGGGAGCTCAGCGGACAGGAGAGCAACGGGGATATGGACTCTGCCTGGAATGGGTACACGGAGGTGACGGCGGCGGAGCCCTACGACTTGATTGCGCGCGAGAGCTGGGTCTCTGACGGCTCCGAGCTCGATGTCACTGAGAAACGGGATAATCTCGAGGAAGTACCTCAGTACCCAAAGCCCCGGCTGTACACGTGCTCCCAGTGCGGGCTCAAGTTCCCCTCCTTAAAAGAGCTGAGGGGGCACAAGGCGCTCGCCCACGCGCTGCCGACCTGCTCGTCTTATAGCCGCATCTCCGCCACCGCCATAAAGAAGGAGGAGAAGATTGAAGAGGGACTGTCTTGCGCAGCAAACCTCCTGGCCCTGGACACAAAGGACACGATAACGTCCACGATCCTGCAGGTGTATGACACCATCGATGAGAGCAAGCCCAGGCTGGAACTGTTGCAGCAGACCAAACGGAAGCGGAGGGACTTCGTATGTCCTACTTGTAAAGTTGATCAGATAACGGACGCAGCGTTCACGGCCCACCTCCGCACGCACCCGCTGGAATGTCTGCAGTGCGGCAAGTGTTTCTTCAGACGAGCCAACCTTAAACTGCATCTGAAGACACACCTCGGGATCAAGAACTATAAATGCGACATATGCGAGAAGCGGTTCATAACGCGACAGAAGTTAGCGGAGCATCACAACATCCACACGGGGCGGGCGCCCGTCAAGTGTACACACTGTGACGACACCTTCCGGAGGTACTCCAATATGGTGCAGCACAGgAACCGTCACCATTTCCACAAGCGTGCGACAGTCCGCGACTTCGTCTGCCACTGCGGGCTCGTGCTCCACTCCCGAGCTAAGTTCGCGTGGCATCAGGAGACGCACGACGACCGCCCTAAAGCCTGCGTGCACTGCGGAGACAAGTTCGTGCACGCAGCCTCGCTTACAAGGCATATGAGGAGGAAACACAACCATCTGTATCTCACTGTGCCGACGGCCACGAGGGCGGACAATGTGCCCTGTCCTATTTgtaaacagATATACCTGCGCACAAATCTGCGCACCCATCTACTGACACACAGCGGCAAGCGTCCGTACTCCTGCGTCATCTGCAACAAAGCGTTCACCACCAAATGGAACCTCAAACTTCACCGTTGGACCCACGTGTCGCGCTCCGCCAAACCCTTCAAATGCAGCCTCTGTAAGGGAGCATTTATCCGACGGACAGAATACATATCGCACATGAATGCACACAAATCCGTCCGCCCCTACACTTGCAATTACTGCGGGTGTCAATTCATCCGCAAGTACAACTGTCAGCGGCACGTGAAAGAACATGAAACCGATAAGAAATTTGTCTGCAAAGTCCCCGAGTGCGGCAAAACGTTTCATCGCAGCTATTACCTGTCTGAACATATGAAGGTGCACAGTGGGGCTCGACCGTTCTCGTGCAATATCTGCGGAAAGACTTCCAGTAACAAATCCAACCACAATAAGCATGTGAAGATTCACCACGCGAGGGAACCTATTGCTACGGAAGCGTAA
Protein Sequence: MDQLVQCPVCTLFLHNGMSLESHLDTHPKDQVIKALCSIANKSSCASSRTSTPANSERSYRSRSQTPVAEDNGRWNGANRNSEHDRYWSRTPSGNTSRAPSGSSSQAPSRTPSRTPSRTQSRTPRSTSSANVSRNCTPDIRLIDNIRYETSTLSGSSQHSHQSTVSNPPLLLKADKTQQTYNPPLIVDFEPKYVYCPEPQEDREVKYSRSAEYNAMEVNNGFSYNIPPVTTVKLQPNLVSSGPRKRNDPPKVLPKTNNLLNLVKNNVGTLPYLAPNVKPVHVVLGPSAPTFVHKNVQNSMIMTGGLPTTQVHIDAKTVPPLVQNHFNQLSTSSFTPGTTVVTQNSQYFYQEMVQNIDPKSFIPTIPTVFTGENVTNVAQTSSVYQNLMLVDQFGNTSCMYTTPQQIIPKQCGTQIFPEATTILTNAQKPGPTLNDQNKTLIIEVGPMVPSVALSSCSNTASKVLSRPPRPMPAIVPNFTLPKAEAPSVTITEKMDTQGEVTGTTKGLKILSNIKVEVPVQHNKNMINTVMDLTGSNDPEYPERSISPEKIYIEEHNPKSIQDFSQPSTSKGDTSIGFMELKKIASPTSSKDSTSKTISVDNKVDMEFGDSCQVLDLICNEKPSISPISELSESGDNSTDRTSKSPKPQAKKTINDVDSKEKIVQLPIKQFRNTPLRLNNIYVRKSKKVLQIKNLKSITEGGPIGQQAEPVPCTSTSAVPSFAGQVEKTEIVPKSMLKTISIEEIKEKDELAGFGGANRDAAEPASAVKSGSARPEVVQVKEELSSSNEGAFGGDGRADDMTPLDPLRPINVVSYGNMSPPDFDEESSHRELLDLEGAGKTKQFVNLINENYFGDNNIYADYFTAEREVFDDKGPPVFKDNAKEAFSCNIWGEPSHKENEFVLPNFIHESYKIAENGMDYEGERDELQGEAGEKDCKADLLSESRSEGEPTLNICTDERMPPRGELSGQESNGDMDSAWNGYTEVTAAEPYDLIARESWVSDGSELDVTEKRDNLEEVPQYPKPRLYTCSQCGLKFPSLKELRGHKALAHALPTCSSYSRISATAIKKEEKIEEGLSCAANLLALDTKDTITSTILQVYDTIDESKPRLELLQQTKRKRRDFVCPTCKVDQITDAAFTAHLRTHPLECLQCGKCFFRRANLKLHLKTHLGIKNYKCDICEKRFITRQKLAEHHNIHTGRAPVKCTHCDDTFRRYSNMVQHRNRHHFHKRATVRDFVCHCGLVLHSRAKFAWHQETHDDRPKACVHCGDKFVHAASLTRHMRRKHNHLYLTVPTATRADNVPCPICKQIYLRTNLRTHLLTHSGKRPYSCVICNKAFTTKWNLKLHRWTHVSRSAKPFKCSLCKGAFIRRTEYISHMNAHKSVRPYTCNYCGCQFIRKYNCQRHVKEHETDKKFVCKVPECGKTFHRSYYLSEHMKVHSGARPFSCNICGKTSSNKSNHNKHVKIHHAREPIATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -