Cpus036158.1
Basic Information
- Insect
- Cabera pusaria
- Gene Symbol
- ZNF711
- Assembly
- GCA_954871355.1
- Location
- OX940908.1:7243516-7247097[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 3 4.4e+02 3.1 0.9 5 23 445 463 444 463 0.94 2 12 0.015 2.2 10.3 0.2 3 23 471 491 469 491 0.94 3 12 0.11 15 7.6 0.3 2 23 499 520 498 520 0.94 4 12 5.4e-08 7.8e-06 27.5 0.5 2 23 526 547 526 547 0.98 5 12 0.0017 0.25 13.3 4.4 1 23 553 575 553 575 0.99 6 12 0.0098 1.4 10.9 0.5 2 22 580 600 579 600 0.91 7 12 0.00013 0.019 16.8 0.1 1 23 629 652 629 652 0.97 8 12 0.00026 0.037 15.9 0.1 3 23 661 681 660 681 0.99 9 12 6.1e-05 0.0088 17.8 0.4 1 23 690 712 690 712 0.98 10 12 4.7e-05 0.0069 18.2 3.6 1 23 718 740 718 740 0.97 11 12 0.0034 0.49 12.4 0.3 3 23 748 768 746 768 0.98 12 12 5.6e-05 0.0081 18.0 0.8 1 23 774 797 774 797 0.96
Sequence Information
- Coding Sequence
- ATGGCATCCTATCTGCTGCCTCATCAACTAGGTTTCGGCAACCCCCCCCCAACTTGGCTCGTTGAGAGGTATATCATTCTTGATGAAGTCAAAGATCATGCACCAGAAATTTTCTCATTTTTGCACCAGTGCTACGCAACTCCTAGCAACCTTTTCTCTAACGACGTGAGAATTTCATCTCAGGTAGGAGCTCAGCAGGGGGATCCTTTGGGCCCGTTAATATTAAGCCTCGCCATACACAAGGTCATAAGCTCCCTGAAGGCTCCACTTAATATATGGTATCTAGACGATGGCACCATAGGTGGACCCCCAGATACAGTGGAGGGGGACTTGAGGACACTTTCCGGCTCTAAAGAAACTGGGATTGGAAGTCAATACATCCAAGTGAAAGCGGATGATGGTTTACCCCAAAAACTCTGCGGAGATTGCTGCGCCAGCATGAACTTAGCGTACCAGTTCAGAAAACAATGTATTAAGATGGATACTGAACTCAAACTACAGCTAAATAACCTCCTGAGCCAATGCAATGAAAGCAACATTGACAActtaaaaaatgctgaatctgATCTAAATCAAGACATAGAATTCGCTAACGATCCAATGAAGCAACTCGAAGCTGTGATCAAAACGGAACCAATGGATAGCGATGACGAATACTACTATGTTCTAGTAATTGACAACCCCAAAGATAAGGAGAATTCGGAAACCATAATTGTCAAATCTGAAACAGAAGATGTGCAGATAAAAAAGGAAAAAGTGGAAACTGGTACCAAAAGTTCCTTACAAATAAGTGACATTTATGAAGATATTGAGGAAGAAATTATGCCCACAAGCATTCAGAAACGTATAGAGCCACAACCCGAACATAATGAGTTCGACAACAATATGGATTCATTCTCAATGACTAACAATATTCCTGTAAACGTCCCAGCAACGATTTTAGAAAATGAAGAGATTGGTCAAGACGATAACATAGGAGACATGGATGTTGACGAAACACCACATCATATGTTGCCTGAGGATTTGCAAGAGAATAATCTCACAAATGTACAAGAGATTACAGATCAgaatttgataaaaatattaacaagTGCAGGCGAAGATGGTACTATACTATTGAAAAGCGATGGAATGGTCCAATACTTGACTGATGGCGGACAGTTAGTGATGAATGATGAAGATGAAGAACAGTCACAAGAAGTAATCCTATGCGAAGGCGATGAATCACAATTTCAAATAGTAAAATATGACGGATCTGAATTAGTAATTGAGTACGCTGATGAAGGTGGAATAGCAACTGTATTACAACAAGCGGATGACACGTACTTGTGTGACTGCGGAGACCAATTCCAAGACTTGGAAGAATATGAGAAACATCAGCACAAACATAACCCTGGTGGTGAACATTTATGCAACCTCTGTGGCAAAGGATTTGAGTCTGCGGAGATTTTGACAGGTCACATGCTACTCCATAATGTTCCTGGGTTGTTATTACAGTGCCCTTTCTGTGATCAAGTTATGAAGCGAAGCGCGTTAACGCAGCATATCAAATATGGACATAATAACATCAAACCACAATGTGAAATCTGTAACAAAACATTTGCAAATCCCAACAACTTGAAACGTCACATGATGATTCACACAGGGATCAAAGAATTTCAATGTGACGTCTGCTCAAAACGTTTCCATCAGAAAATAACAATGCAGACTCACAGATTAACACATATGAATCCGTTGAACTGTTCTCAATGTGACACATCTTTCAAGGATAAGGAAGCTTTCGACTTGCACAAAAATACACTCTGCGTTAAAAGCGACGCTAAGGTGGAATTGATAAAGACTGTTAAACAAGAGATTACGACTAGTCTCGGCAAAGTACTAGGATACGCTTGCTCATTGTGTAAGAAAATGTTCTCAATCGAAGAAGCTTTGGAACGTCATATAGAGACAACACATATAATCGATCCTGCAGAATTGTTATGTTCAGAATGTGGGGAAGTAGTATCATCGAAAAAAGAAATGCAAGCACATATATTGACGCATGATAAACGTAAGACTGTTAAACGTTTTGAATGCAGCGTTTGTGGCAAAGGATGTTCCAGTCAAGCGATGTTACTGATGCATGAACGAGTCCACACAAACGAAAGACCATTCGCTTGTCAACTGTGTCCTTTGAAATTCAAGACAAAAACTCATTTAAGAACTCATCAACTAACTCACACGAGAGAAAAGAAGTTTGGTTGTTCCGTTTGTATGAAGTTCTTCGCTCTGAAAGGAAATTTAGTAGTGCATTTACGAACGCATACTGGGGAACGACCATACGTATGTTCCATCTGCGAGGAAGCATTTATCGACTCTAAATACTTAAAGAAACACAAGTTGAAGAAGCATCCCACAGAATATTCAACGTTTTGGAATCAAAGCCAAAGCAATTTGAGTTCAAAGAAACAGAATGTAGATAATAATACAGAATATGCAGTTCCTTGGAACCAATACTTGAAGATGAAGTATGAGGAACAAGAAAATGTTGAGGAAGACGAATGA
- Protein Sequence
- MASYLLPHQLGFGNPPPTWLVERYIILDEVKDHAPEIFSFLHQCYATPSNLFSNDVRISSQVGAQQGDPLGPLILSLAIHKVISSLKAPLNIWYLDDGTIGGPPDTVEGDLRTLSGSKETGIGSQYIQVKADDGLPQKLCGDCCASMNLAYQFRKQCIKMDTELKLQLNNLLSQCNESNIDNLKNAESDLNQDIEFANDPMKQLEAVIKTEPMDSDDEYYYVLVIDNPKDKENSETIIVKSETEDVQIKKEKVETGTKSSLQISDIYEDIEEEIMPTSIQKRIEPQPEHNEFDNNMDSFSMTNNIPVNVPATILENEEIGQDDNIGDMDVDETPHHMLPEDLQENNLTNVQEITDQNLIKILTSAGEDGTILLKSDGMVQYLTDGGQLVMNDEDEEQSQEVILCEGDESQFQIVKYDGSELVIEYADEGGIATVLQQADDTYLCDCGDQFQDLEEYEKHQHKHNPGGEHLCNLCGKGFESAEILTGHMLLHNVPGLLLQCPFCDQVMKRSALTQHIKYGHNNIKPQCEICNKTFANPNNLKRHMMIHTGIKEFQCDVCSKRFHQKITMQTHRLTHMNPLNCSQCDTSFKDKEAFDLHKNTLCVKSDAKVELIKTVKQEITTSLGKVLGYACSLCKKMFSIEEALERHIETTHIIDPAELLCSECGEVVSSKKEMQAHILTHDKRKTVKRFECSVCGKGCSSQAMLLMHERVHTNERPFACQLCPLKFKTKTHLRTHQLTHTREKKFGCSVCMKFFALKGNLVVHLRTHTGERPYVCSICEEAFIDSKYLKKHKLKKHPTEYSTFWNQSQSNLSSKKQNVDNNTEYAVPWNQYLKMKYEEQENVEEDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -