Basic Information

Insect: Cabera pusaria
Gene Symbol: -
Assembly: GCA_954871355.1
Location: OX940891.1:14421271-14431629[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00012 0.017 16.9 2.8 1 23 464 486 464 486 0.98

2 8 8.4e-07 0.00012 23.7 1.4 1 23 492 514 492 514 0.98

3 8 7.5e-06 0.0011 20.7 0.6 2 23 523 544 523 544 0.98

4 8 6.9e-06 0.00099 20.8 0.9 1 23 550 572 550 572 0.99

5 8 8.8e-08 1.3e-05 26.8 2.1 1 23 578 600 578 600 0.98

6 8 2.1e-06 0.0003 22.5 2.2 1 23 606 628 606 628 0.97

7 8 9.4e-05 0.014 17.3 7.2 1 23 634 656 634 656 0.97

8 8 6.7e-05 0.0097 17.7 1.0 1 21 662 682 662 683 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00012	0.017	16.9	2.8	1	23	464	486	464	486	0.98
2	8	8.4e-07	0.00012	23.7	1.4	1	23	492	514	492	514	0.98
3	8	7.5e-06	0.0011	20.7	0.6	2	23	523	544	523	544	0.98
4	8	6.9e-06	0.00099	20.8	0.9	1	23	550	572	550	572	0.99
5	8	8.8e-08	1.3e-05	26.8	2.1	1	23	578	600	578	600	0.98
6	8	2.1e-06	0.0003	22.5	2.2	1	23	606	628	606	628	0.97
7	8	9.4e-05	0.014	17.3	7.2	1	23	634	656	634	656	0.97
8	8	6.7e-05	0.0097	17.7	1.0	1	21	662	682	662	683	0.95

Sequence Information

Coding Sequence: ATGTGCGAATGGCTTTCCCACGGTGACTGGTGTGACGTAAAGCTTTTATGTGGCGGACGATCCTTTAACGCGCATCGTGCTGTGCTTGCCAGTGTCTCCACATTTCTGAGGCGGATCTTGCTCTCTTCTCCTTCAGATGAATCACCAACGTTTATCGTCCTACCCGACTTCGATTTGGAAGCAATGTCTTCAGTTTTATACTACATATATAACGGTGAAGTTACTCTGCAGAAACATAAGCTAGGATTATTTCTAGACATAATACAAGCGATGCAGATTTATATAGATTGCCAATACTTGCCCAAAATAAGAGAGGTTGTAGAAGAAGACAATTTTGATCTAAATATGTTCCACGAAGCGAATTCGGTGAAGAATATATTCACTTTGGGATTTGGAGACGATAACGATcaaaagtattttaatttaagaagAGGTACACAGATGCGGAGCGTGCTCTTACAGTATTCACAGGGTAAAGCAGATTTTCACGATAACACCGTACGATGTCAGAATGGGAGCGAGCTCCGCAAGTCTCGTTTAGGAAATCTGAAATCGCCGTATGGAGACCGACAAAGGAACTCTTTCCTACGTGATTTATTTATCGAGACATATCCTCGAAACGGTAATGTTAACGGTCTGACGGAAGGCGTGCTAGCAATATCAAATGAATGCTATCATTCTCCGGCATCTATGCTCTCGCCGAATGCAAATGGTGGACATCTCGGCGGCGACGCACTCTCCAGATTCCATACAAAAACCAGTGAACAGAGTTTAAGCATGTCCGCAATATTTCATGACAATCGGGAGATACACAGCGGAAACAGTTTTAATGGCAGATGCAAAATACAGCAGAACAACATCGTCGGGCCGATAAAGTTTCCGGAAGATGCGAGCGCCATGACTTTTGTTTATGGTAATAGAGAAACCAACACTTCAGTTAAGAACGATCGGACATCTTTATTACCCCGACAGTTCAATGATATAAGTTTGTGGCCTGGTTTGAATGCATCTTTGGATCTTCGACGGACTATTTTGGGAGCCATGCAGTATTGTGTAATGGACGATTCCTCGCATAGCGGTTTGCAAAATTCTTCCTCGAGATGTGAAAATGGAGAGAAGataaaagatttaaaaataaacaggtCTCCTAAGATAATATTTAATCAAGTATTAGAGAACCCATGGAGTCCGCGAATTCCTAAAAACTTTAAACCATTCCGTCGAAAACTTGAACATATAGTACAAAATCACAAGGTGGAGACGATTGGAGCTATGAAtgacaataacaataatattcgaaaatcaaaattagaaGTCGAGGAAAATATATTACCTAGTCTGGAGACGACTAAGTCTATATCTCCAATATGTACTAAATTAGTAGATAGTTTTAAATGCACCCATTGTAATCAGGTGTTTACAACGGATGAGTCCCTGGCGCTCCACAGTAGACGGCACTCGACCAACGCTCGGTACTCGTGCGGAGAGTGCGGCAAAACATTCTCTCAACTCAGAAACTTCAAGTACCACATGTCTATACACAGGGGCACTAGAGAATTCGCCGCGACATGCACCGTATGCGGGAAGTACTTCAATGATCGCGGATATCTGAGTAGTCATATGAAGATACATCGGAATCGAAAGGAGTACAAATGCACTCAATGTCCAAAGTCATTTAACCAACGAGTCGCTTACAATATGCATGTGCGCATTCATACAGGAGTTAAGCCGCACGTATGTGAGGAGTGTGGGAAGGCTTTTTCCCGCAAGATGTTGTTGAAGCAACATCAGCGCACGCATTCTGGTGAGAGGCCCTATGCGTGCACTCACTGCGACAAACGATTCGCAGACCGATCCAATATGACGCTGCATTTGAGATTGCATACAGgAGTAAAACCCTTCTCCTGCTCGCTATGTCCGAAGTCGTTCACAAAGAAGCACCACCTGAAGTCTCACCTGAACTTCCACACCGGTTCTAAGCCGTACTCTTGTCCTCGATGCAATCTTGCATTCACACAGTCCTCTAACATGAGAACACACTACAAGAAATGCAGCGCTCCTGAACCTGTCGAAGTTACTGACGGCTCTGGGAATGATAGTCAGACACATTCTTAA
Protein Sequence: MCEWLSHGDWCDVKLLCGGRSFNAHRAVLASVSTFLRRILLSSPSDESPTFIVLPDFDLEAMSSVLYYIYNGEVTLQKHKLGLFLDIIQAMQIYIDCQYLPKIREVVEEDNFDLNMFHEANSVKNIFTLGFGDDNDQKYFNLRRGTQMRSVLLQYSQGKADFHDNTVRCQNGSELRKSRLGNLKSPYGDRQRNSFLRDLFIETYPRNGNVNGLTEGVLAISNECYHSPASMLSPNANGGHLGGDALSRFHTKTSEQSLSMSAIFHDNREIHSGNSFNGRCKIQQNNIVGPIKFPEDASAMTFVYGNRETNTSVKNDRTSLLPRQFNDISLWPGLNASLDLRRTILGAMQYCVMDDSSHSGLQNSSSRCENGEKIKDLKINRSPKIIFNQVLENPWSPRIPKNFKPFRRKLEHIVQNHKVETIGAMNDNNNNIRKSKLEVEENILPSLETTKSISPICTKLVDSFKCTHCNQVFTTDESLALHSRRHSTNARYSCGECGKTFSQLRNFKYHMSIHRGTREFAATCTVCGKYFNDRGYLSSHMKIHRNRKEYKCTQCPKSFNQRVAYNMHVRIHTGVKPHVCEECGKAFSRKMLLKQHQRTHSGERPYACTHCDKRFADRSNMTLHLRLHTGVKPFSCSLCPKSFTKKHHLKSHLNFHTGSKPYSCPRCNLAFTQSSNMRTHYKKCSAPEPVEVTDGSGNDSQTHS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00250642;
90% Identity: iTF_00250642;
80% Identity: iTF_00250642;