Cpus042770.1
Basic Information
- Insect
- Cabera pusaria
- Gene Symbol
- ZFY
- Assembly
- GCA_954871355.1
- Location
- OX940913.1:14522299-14527904[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 25 0.22 32 6.7 0.5 2 20 119 137 118 139 0.89 2 25 0.79 1.1e+02 4.9 6.1 1 23 169 191 169 191 0.97 3 25 0.0021 0.3 13.0 1.9 1 23 196 219 196 219 0.96 4 25 2 2.9e+02 3.6 1.1 5 21 225 241 223 242 0.92 5 25 7.4e-05 0.011 17.6 1.0 1 23 251 274 251 274 0.96 6 25 0.0044 0.64 12.0 0.3 1 23 280 302 280 302 0.93 7 25 0.0025 0.36 12.8 3.7 1 23 309 332 309 332 0.97 8 25 0.81 1.2e+02 4.9 0.5 1 9 343 351 343 353 0.90 9 25 0.001 0.15 14.0 1.1 2 21 457 476 456 477 0.94 10 25 3.4 4.9e+02 2.9 2.9 2 19 509 526 508 531 0.88 11 25 0.00078 0.11 14.4 0.2 1 23 536 558 536 558 0.94 12 25 0.34 50 6.0 8.0 1 20 561 580 561 582 0.93 13 25 0.00058 0.084 14.8 0.2 1 23 601 624 601 624 0.95 14 25 4.4e-05 0.0064 18.3 1.7 1 23 630 652 630 652 0.98 15 25 0.55 80 5.4 1.5 1 23 686 709 686 709 0.96 16 25 1.3e-05 0.0019 20.0 0.4 2 21 834 853 834 854 0.95 17 25 3.3 4.8e+02 2.9 0.1 2 23 859 881 858 881 0.90 18 25 0.28 40 6.3 0.2 3 23 888 909 887 909 0.94 19 25 8.9e-07 0.00013 23.6 1.0 1 23 915 937 915 937 0.98 20 25 0.42 61 5.8 2.8 2 20 941 959 941 960 0.94 21 25 1.7e-05 0.0025 19.6 0.4 1 23 987 1010 987 1010 0.95 22 25 0.0062 0.9 11.5 1.5 1 23 1016 1038 1016 1038 0.90 23 25 0.13 19 7.3 0.1 1 23 1044 1066 1044 1066 0.97 24 25 0.031 4.5 9.3 0.9 1 23 1072 1095 1072 1095 0.94 25 25 4.6e-05 0.0066 18.2 0.2 2 23 1102 1124 1101 1124 0.96
Sequence Information
- Coding Sequence
- atGGAAAACGCGCCTAATCTGCCGAACCAAATATGCGACATCTGCGCTTCACACATCATCAGTTTCATTCACTTCTACAAATTATGCAGACAGTCCACAAATAAATGGCAACAAATAACAGAACATTTGGAAAACGTTTCTGTCAATAAAAAAGCTACAAATGTCTTTATTTTATTAGGCAATGAACTAAAAACTCTATCGGACAGAAGTGCAAGACCCAATACACCAAAAGATGTTTTAAGTAGCTTGAAACAAAGACTAAAACATGCTCGTTATGAAGATAAACGCAAGATTAATAGATCTAAtacaaaaaagaagaagatGGAAGAACAAAACGAAAAGGAAAAGCGTTGGACGTGTCCAGAATGCAAAAGGAGTTATAAAGAACTAGATATATTCAATAGACATTTGAGTCACAGTGACAAGCAGTGTTGCATGTATTGCTATCTCATAATCGATATGAAGTCATATGGAAAGCATCTGCTATCTCATGATGTTGTATGCTTTACGTGTGATAAATGTCACTCTCACTTTCCATCGCGAGATCGTTTCGTGAAACACAAAACGGTGCACGCGAATGGAAATTTTACGTGCCCCGACTGTAAAATGAATTTCAAAACAATGGACAGACTGACCCTTCATACTAACTACAGACATGTCAATGTAAAATGTGTCTGCAATaacactttcagtaacaaaGCATGCTACATAAGCCATAAGAGAATTTGTGACAAGAAACGAGAAAAATTATTCATTTGCAATTATTGCACAAAACGGTTTAACAACAAAAGTAGCATAGCATCACACATTCAAAATATCCATTGCAAAAAACGAACCCACGTTTGCAACGACTGTGGCAAAGAGTTTTACGGTCTTGCAGCTTTAGTAGATCACAGCTACAAACACGATAGACGATTCGATAGATTTACTTGTCAATTCTGTGATTTAGGATACAGTACCAACCATGGATATAAAAGGCATTTAAGACTAAAGCATTATAAGGATAATCCTGAACTGAAAATGAAATACCAATGCCATATTTGTGACAAATTTCTTGTTGAGGAGACACCAGAAATGCCGACCAGCCTCTGCCGAGATTGCATGGAAAGCGCTATTAAGGCGGCAGCTTTCCAACAACTCTGCAAGGTATCGGCAAGATATTGGACTGAAGCAACAACATGCATACTTGATGTACAAAACGCTTATGAAGATGATaagacattatttattttcctcGATCAAGACTCTCAATCACAAATATCCAAAACTGACGCATCAAAAGCCCAGATCGAAACTGTAAAAGACGCTATAACTATTCTAAATCAACCGAAAGATAAGAAAAAGAGAAAAAAGCGCTCCGTTACTTGCCAATGTCTTACTTGTGGCAAAAGTTTCGGCAACCTAGAAAAATTGAACGAACATTTAAGATATACTCCAAGGAGCTACTGCCTAGAATGCGGCGAGCTTCAAAACAGAAAGGGTTTAGCGAAACATTTGAAATTACAACACAATATAAACATTGTTCAGTGTGATAAGTGCCATGAGATATTTGAAGATGTTGTCAGGCTTAAGTCTCATTGTACAAAAAGCCACGGTCCTTTCAGTCACACCTGCAGTGTTTGTGGCATAGGCTTTCCAAACCCGCGAGGGTTGAGGGCCCATAAATACTTGCACACACTCTTCCACTGCCACAGGTGCGGCAAAAGTTTCGAATACAGTCGATGTTACAAATACCACCTAACAAAATGCAAAACCGGAACCTTACAAAATGCAACAAAGAAAACGTTCGTGGAAACAGTCTTCGAATGCAACGATTGTGGCGTAAAATATGACAAGAAGCCATCATTGAGGATACATATAATACAGAAACACTTGAACGTGCTTCCGTTTGTTTGTGATACTTGTGGGAAGCGAACTTCCACTCTTGCACATTTGAGGTCTCATGAGCAAACGCATGAGCAACAACGGAAAACTTTTCATTGCCACTGTGGAGCGAAATTCCGCTCACATTTAGGGCATAAACTCCATATGCGGATACATTCAGGTGATACACCATACGAATGCGAGATTTGTTTCGAGAAGTTTCTATCGTCGTCGCGTCGTTTAGACCACATGAAGCGGCGTCATCAGAACATCGTCGATGTTGCTCATTGCTGTGAACAATGCGATGCTAAATTCCTAGTGGAAGAACCCGCATGTCCGTCCGGAGTATGCGTGACATGTGCGAGCGCCGCTCTCGCCGCGCAAGAGTTTAGAATGTTCGTCAGAACCGCAGACAAACTGTGGTACAAAGCTATTACCAACCTAGCCAACCTTCAATATGAAGACACGGGCAACCAGGCGAAGTCAATCTGCGCATACTTCTCAGAGAATGACGTCACGTTCCGAACGGCCACAGATTATACCGACGGCAATCCTAAGACCATAGTGAATAGAACAAAAACTAGAGTCAATAAGACGTCACGGAGGCCGAAATGTCATCGCAAAGACTCGGTCAGAACTTGCCCAGATTGCAATAAAGTGTTCTCCAATCCGACTTTACTTCACGATCATATGAAAAACAATCAGAAAGATTCCTGTCTAATCTGTGGTGTCGTTACTCAAAGAGGTCTCGATATGAAGAAGCATATGTTTGAAGAACATAAGCAGACTCACGCCCTCTGTGGGCAGTGCCCCGCTTTATTCCCAGAAGAGAGTGAATTGAAGAATCATATCGAAAACTGTCATAATAAGCCAGGCGTCTTTACTTGTCCAGATTGTAGTAGATCTTTCCCGAGGCAATCTACATTTGAAAATCATTTGCAAATGCATGTTGTAAGAACTTGTAGGACTTGTAACCTACAGTTTACAAATAGAAGTTGCTACAGAGAGCATAGGGTACATTGCGAGCCTGACGCGAAACCCGACGCTAAAACAGTGCCACGGAATCGTCGATCCAACCTGCGTGACAAAGGAGAATTTATATGTAATTactgcaataaaatatatacaacacGGCCgcaattaaaaaatcatatactaTGGATTCATATGGATGTCAGACCTCATCAGTGCCAATATTGTGGAAAAAGGTTTTATACCATCACGAGACTGGCTGAACACAGCGTCGTTCATACTCGCGCGCGAAACTTCTCTTGTGATATCTGTGGCGCGAAATTGGTTTCCAAAATGGCCGCCGTTTACCATAGAAGGCGGCATACGGGTGAAAAACCTTACAAATGCGAAGATTGCTCCGCTACCTTCATTTCTTCCTCGCGTAGATTGGAACATGcgaaaagaaaacataataaaggGATAAGAATTCAGTGCATGCTTTGCCCGGCAAGCTTTGTTAGGAAAAGTGAActtaaaaatcatttgaataagGCTCATAATAATACTGATGTTAAAAAGGATGAGCAGAATATTGAGTGGAAAATGCCACAGGAGTTGTGTGGCGGGTTATAG
- Protein Sequence
- MENAPNLPNQICDICASHIISFIHFYKLCRQSTNKWQQITEHLENVSVNKKATNVFILLGNELKTLSDRSARPNTPKDVLSSLKQRLKHARYEDKRKINRSNTKKKKMEEQNEKEKRWTCPECKRSYKELDIFNRHLSHSDKQCCMYCYLIIDMKSYGKHLLSHDVVCFTCDKCHSHFPSRDRFVKHKTVHANGNFTCPDCKMNFKTMDRLTLHTNYRHVNVKCVCNNTFSNKACYISHKRICDKKREKLFICNYCTKRFNNKSSIASHIQNIHCKKRTHVCNDCGKEFYGLAALVDHSYKHDRRFDRFTCQFCDLGYSTNHGYKRHLRLKHYKDNPELKMKYQCHICDKFLVEETPEMPTSLCRDCMESAIKAAAFQQLCKVSARYWTEATTCILDVQNAYEDDKTLFIFLDQDSQSQISKTDASKAQIETVKDAITILNQPKDKKKRKKRSVTCQCLTCGKSFGNLEKLNEHLRYTPRSYCLECGELQNRKGLAKHLKLQHNINIVQCDKCHEIFEDVVRLKSHCTKSHGPFSHTCSVCGIGFPNPRGLRAHKYLHTLFHCHRCGKSFEYSRCYKYHLTKCKTGTLQNATKKTFVETVFECNDCGVKYDKKPSLRIHIIQKHLNVLPFVCDTCGKRTSTLAHLRSHEQTHEQQRKTFHCHCGAKFRSHLGHKLHMRIHSGDTPYECEICFEKFLSSSRRLDHMKRRHQNIVDVAHCCEQCDAKFLVEEPACPSGVCVTCASAALAAQEFRMFVRTADKLWYKAITNLANLQYEDTGNQAKSICAYFSENDVTFRTATDYTDGNPKTIVNRTKTRVNKTSRRPKCHRKDSVRTCPDCNKVFSNPTLLHDHMKNNQKDSCLICGVVTQRGLDMKKHMFEEHKQTHALCGQCPALFPEESELKNHIENCHNKPGVFTCPDCSRSFPRQSTFENHLQMHVVRTCRTCNLQFTNRSCYREHRVHCEPDAKPDAKTVPRNRRSNLRDKGEFICNYCNKIYTTRPQLKNHILWIHMDVRPHQCQYCGKRFYTITRLAEHSVVHTRARNFSCDICGAKLVSKMAAVYHRRRHTGEKPYKCEDCSATFISSSRRLEHAKRKHNKGIRIQCMLCPASFVRKSELKNHLNKAHNNTDVKKDEQNIEWKMPQELCGGL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -