Cpus035993.1
Basic Information
- Insect
- Cabera pusaria
- Gene Symbol
- -
- Assembly
- GCA_954871355.1
- Location
- OX940908.1:3693554-3707473[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 34 0.0021 0.3 13.0 0.1 1 20 87 106 87 108 0.96 2 34 1.2 1.7e+02 4.3 0.0 5 20 119 134 118 136 0.92 3 34 0.78 1.1e+02 4.9 0.1 5 20 147 162 139 164 0.85 4 34 1.2 1.7e+02 4.3 0.0 5 20 175 190 174 192 0.92 5 34 1.2 1.7e+02 4.3 0.0 5 20 203 218 202 220 0.92 6 34 1.5 2.1e+02 4.1 0.0 5 20 231 246 230 247 0.93 7 34 1.2 1.7e+02 4.3 0.0 5 20 271 286 270 288 0.92 8 34 1.5 2.1e+02 4.1 0.0 5 20 299 314 298 315 0.93 9 34 1.2 1.7e+02 4.3 0.0 5 20 339 354 338 356 0.92 10 34 1.2 1.7e+02 4.3 0.0 5 20 367 382 366 384 0.92 11 34 1.2 1.7e+02 4.3 0.0 5 20 395 410 394 412 0.92 12 34 1.2 1.7e+02 4.3 0.0 5 20 423 438 422 440 0.92 13 34 1.2 1.7e+02 4.3 0.0 5 20 451 466 450 468 0.92 14 34 1.2 1.7e+02 4.3 0.0 5 20 479 494 478 496 0.92 15 34 1.2 1.7e+02 4.3 0.0 5 20 507 522 506 524 0.92 16 34 1.2 1.7e+02 4.3 0.0 5 20 535 550 534 552 0.92 17 34 1.2 1.7e+02 4.3 0.0 5 20 563 578 562 580 0.92 18 34 1.2 1.7e+02 4.3 0.0 5 20 591 606 590 608 0.92 19 34 1.2 1.7e+02 4.3 0.0 5 20 619 634 618 636 0.92 20 34 1.5 2.1e+02 4.1 0.0 5 20 647 662 646 663 0.93 21 34 1.2 1.7e+02 4.3 0.0 5 20 687 702 686 704 0.92 22 34 1.2 1.7e+02 4.3 0.0 5 20 715 730 714 732 0.92 23 34 0.78 1.1e+02 4.9 0.1 5 20 743 758 735 760 0.85 24 34 1.2 1.7e+02 4.3 0.0 5 20 771 786 770 788 0.92 25 34 1.2 1.7e+02 4.3 0.0 5 20 799 814 798 816 0.92 26 34 1.2 1.7e+02 4.3 0.0 5 20 827 842 826 844 0.92 27 34 1.2 1.7e+02 4.3 0.0 5 20 855 870 854 872 0.92 28 34 1.2 1.7e+02 4.3 0.0 5 20 883 898 882 900 0.92 29 34 1.5 2.1e+02 4.1 0.0 5 20 911 926 910 927 0.93 30 34 1.2 1.7e+02 4.3 0.0 5 20 951 966 950 968 0.92 31 34 1.2 1.7e+02 4.3 0.0 5 20 979 994 978 996 0.92 32 34 0.78 1.1e+02 4.9 0.1 5 20 1007 1022 999 1024 0.85 33 34 0.097 14 7.8 0.2 5 23 1035 1053 1034 1053 0.95 34 34 2.2e-05 0.0031 19.3 1.7 1 23 1059 1082 1059 1082 0.98
Sequence Information
- Coding Sequence
- ATGACAGAAGATATGCGAGGCCCCAACGCTACGGGACGTCAGGCTTACGTGCGCTGTACTGTTTGCAACGAGCAGTTCTTCACGTACCAGGCGTGCATGAAGCACCACCGTCACCATCACCCCGCCGTGCCTTTCATGAAGAAGTCCATCTCATACGCCGCCAAGTCCAACGAGAGGGTCAACTGTGAACTTTGCGGAGCTCTCATTAAGGTGACCAGTCTGTACACGCACATGAACGCACACACACGCACCAAGGTGTACACGTGTGAGATATGTGAGATGCAGTTCAACTATCCTACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTACATCTAGTACATTATTTGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTATATGTAATACATTATTTGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTACATCTAATACATTATATGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTACATCTAATACATTATATGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGGCACCGAGTGGTGAGTTCTATATCTTATACATTATTTGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTACATCTAGTACATTATTTGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTATATCTTATACATTATTTGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTACATCTAATACATTATATGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTACATCTAATACATTATATGTTAAGATATGTGAGATGCAGTTTAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTATATCTTATACATTATTTGATAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTATATCTAATACATTATTTGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTATATCTAATACATTATTTGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTACATCTAGTACATTATTTGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTATATCTAATACATTATTTGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTACATCTAATACATTATATGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTATATCTAATACATTATTTGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTACATCTAATACATTATATGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTATATCTTATACATTATTTGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTATATCTTATACATTATTTGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTACATCTAGTACATTATTTGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTACATCTAGTACATTATTTGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTATATGTAATACATTATTTGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTATATCTAATACATTATTTGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTACATCTAATACATTATATGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTATATCTAATACATTATTTGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTACATCTAATACATTATATGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTATATCTTATACATTATTTGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTATATCTTATACATTATTTGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTACATCTAGTACATTATTTGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTACATCTAGTACATTATTTGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTATATGTAATACATTATTTGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGGTGAGTTCTACATCTAATACATTATTTGTTAAGATATGTGAGATGCAGTTCAACTATCCCACCTCGCTGCTCAGACACCGAGTGACTCACACCGGCGAGAAGAAATACCCGTGTCCTCTGTGTGAGAAGCGGTTCACACAACGGAACAGTATGCAGCTTCATTACAGGACCTTCCATCTTAAGGAGCCCTACCCTAAAAGGAACCGTCAGAAGAAGAAACCGCCGCTGCCCAGCGCCGGGCCGAGCCACGAGCCTAACATCACGCTCATCGCGTAG
- Protein Sequence
- MTEDMRGPNATGRQAYVRCTVCNEQFFTYQACMKHHRHHHPAVPFMKKSISYAAKSNERVNCELCGALIKVTSLYTHMNAHTRTKVYTCEICEMQFNYPTSLLRHRVVSSTSSTLFVKICEMQFNYPTSLLRHRVVSSICNTLFVKICEMQFNYPTSLLRHRVVSSTSNTLYVKICEMQFNYPTSLLRHRVVSSTSNTLYVKICEMQFNYPTSLLRHRVVSSISYTLFVKICEMQFNYPTSLLRHRVFNYPTSLLRHRVVSSTSSTLFVKICEMQFNYPTSLLRHRVVSSISYTLFVKICEMQFNYPTSLLRHRVFNYPTSLLRHRVVSSTSNTLYVKICEMQFNYPTSLLRHRVVSSTSNTLYVKICEMQFNYPTSLLRHRVVSSISYTLFDKICEMQFNYPTSLLRHRVVSSISNTLFVKICEMQFNYPTSLLRHRVVSSISNTLFVKICEMQFNYPTSLLRHRVVSSTSSTLFVKICEMQFNYPTSLLRHRVVSSISNTLFVKICEMQFNYPTSLLRHRVVSSTSNTLYVKICEMQFNYPTSLLRHRVVSSISNTLFVKICEMQFNYPTSLLRHRVVSSTSNTLYVKICEMQFNYPTSLLRHRVVSSISYTLFVKICEMQFNYPTSLLRHRVVSSISYTLFVKICEMQFNYPTSLLRHRVFNYPTSLLRHRVVSSTSSTLFVKICEMQFNYPTSLLRHRVVSSTSSTLFVKICEMQFNYPTSLLRHRVVSSICNTLFVKICEMQFNYPTSLLRHRVVSSISNTLFVKICEMQFNYPTSLLRHRVVSSTSNTLYVKICEMQFNYPTSLLRHRVVSSISNTLFVKICEMQFNYPTSLLRHRVVSSTSNTLYVKICEMQFNYPTSLLRHRVVSSISYTLFVKICEMQFNYPTSLLRHRVVSSISYTLFVKICEMQFNYPTSLLRHRVFNYPTSLLRHRVVSSTSSTLFVKICEMQFNYPTSLLRHRVVSSTSSTLFVKICEMQFNYPTSLLRHRVVSSICNTLFVKICEMQFNYPTSLLRHRVVSSTSNTLFVKICEMQFNYPTSLLRHRVTHTGEKKYPCPLCEKRFTQRNSMQLHYRTFHLKEPYPKRNRQKKKPPLPSAGPSHEPNITLIA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -