Cpus030551.1
Basic Information
- Insect
- Cabera pusaria
- Gene Symbol
- ZFY
- Assembly
- GCA_954871355.1
- Location
- OX940904.1:707973-711703[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.0071 1 11.3 0.2 3 23 258 278 256 278 0.98 2 15 0.045 6.6 8.8 1.3 6 23 290 308 290 308 0.95 3 15 0.22 32 6.7 0.2 3 23 319 340 317 340 0.90 4 15 1.7e-07 2.4e-05 25.9 0.6 2 23 363 384 363 384 0.97 5 15 0.00011 0.016 17.0 0.4 1 23 390 413 390 413 0.96 6 15 0.025 3.7 9.6 0.2 2 23 420 441 419 441 0.96 7 15 0.00026 0.037 15.9 2.4 1 23 447 469 447 469 0.98 8 15 6.6e-07 9.6e-05 24.0 3.4 1 23 475 497 475 497 0.98 9 15 0.0015 0.22 13.4 0.9 1 23 623 645 623 645 0.97 10 15 0.00043 0.063 15.2 2.2 2 23 652 674 651 674 0.92 11 15 4.9e-05 0.0072 18.1 2.0 3 23 682 702 681 702 0.97 12 15 2.8e-05 0.004 18.9 0.3 1 23 708 730 708 730 0.98 13 15 0.0019 0.27 13.1 0.1 1 23 736 758 736 758 0.96 14 15 0.024 3.4 9.7 0.2 1 23 764 786 764 786 0.92 15 15 0.012 1.7 10.7 4.1 1 23 792 815 792 816 0.95
Sequence Information
- Coding Sequence
- ATGGATAGTAAACAAGTGTTTATAGTTACTTCGTCTGAGCTAAACGAGCATAATCCATTACAGCAAGAGTTTGACATACCGGTGATCGATGCTGAAGAAGCGTCGACAAGTAGCATGTGTCCCCAGCCGGCGCTGTCCCCGTCCCGGGAGCGCATGTGTCGGCTGTGTGCCAGCCTCACAGAGTTTGTTGTCCCCATCTTTGAAGGAGAGGGTTTGCAGAATTCACTCGCTGATAAGATTCATCAACACTTGCCAATACAgGTGTCACCGAGTGACGTGCTGCCAGTAGTGATGTGCTTCCAATGCACCAGCACCCTGCTAGCATGGCACGAGCTAGTGTTGTGCTCCGTGCAGGCTGACAGTGCCATGAGAGAGAGGTTCAACCTGCGGTTCTCTACTACACAGGGACAGAAGCAGCAAACGATTGAAGCTAATCAACATCAAGTCAAGCATGACAAGTCTCAGTTAGATAAGAACATTAAAAGCGTATTGAGTGAGTACTCCCACTCGCTGAGCATGGAAGAAGACGGCCAAGTGCAGTCGGTTTGTCAGAAGTGTTGCCCCAACGTTACATTGACGACGGCACATTTCGTCGAGCATCTCAAGTCTGAGCATACCGCTGAAATCCAGAATAGGAATGCGATACACGATTTTATAAAGAACTATGTCACTTTTGTGGAAATTCTTCTATCTGACTCGGAGAGAGACGGGGCTTCTGATTCCACGGAAGAATCGAAGAAGCCGGAAGCGAAGCGGTCGTCGACTCTGCTCTGTCCGTACTGCGAAAGCGCGTTCTCGTCCGCGACTCGTCTCATGTACCATCTCAACAGTCACGGGAAGATATCGCTGGAGGACGGCGTGGACTGCTGCGGCCACGTGTACAACGACAGGAAACATCTCGTGCGTCACCTGCAGGAGATGCACGCCAACAGAGCCCCCGGCGCCGACACTGCGTGCAGGAGCTGCGGGCACCGCGCGCGCTCCGCGGACGAGCTGCGCGCGCACGTCGCGGAGCAGCACGCGGACACGGAGCGCGCGCGGGGGGGCGGGCTGGAGAGCGGCCGGAATCAAAAGACGATCCCGGCGGTCTGCCCCGAGTGCAACAAGACGTTCTCCAACAAATACAACATGTTCGCGCACATGCGAGCGCACTCGCGCTGCGAGGCGCACCGGTGCGCGCGGTGCCCCCGCTCGTACAGCACGCGCGGCAACCTGGCGGCGCACGAGCGGCTGGCGCACGGCGGCGCGTTGCCGGTGCGATGCGCGCGCTGCGGCGAGCGCTTCCCGACGCGCGCCGCGCGAGACACGCACCAACGCGCGCACGACGCCGCGCGCCCCTACCGCTGCCACCTGTGCGACAAGCGCTTCCCCGCCAAGAACTCGCTCGACCGGCACCGCGACATGCACCTCGACGTCCGGAACCACAAGTGTCCCCTCTGCGACCGAGCCTTCCGGAAGAGCTCTCATCTCACCGCGCATGCGCGCACGCACCGTCGAGCCGTCGGGGTCGAGACGCCGGGGCCCCTCGCGCACATCGGACGGATCGAGGACGAGGTCGGCTTCGTGGACGACCCGGGTGGGACCGGGAGCGACACGGACGACGACCGCCCGCTCGCGGACCTCGTGCCGCGGAGGGACGCCGAGTTTCGGACTTTTTACGAGGCGCTGGTGAAGCTGCGAGAGCACATCGTCGAGGAACACGGGCGGTCGGACAAGGAGCCGGCGGAGCGGGCCGGCGATCCCAGCGAGGAGGAGGCGGACGGATACGACGACCTGAGCCCGCGCAACATGCGGCGCGACCGCCTGGACGCGGGCACGCGCCGGGAGCTGGCGGCGGCGCGCGTGCTCGTCGGGCCGCGCCTGCTGTACGCGTGCCCCGACTGCGGCAAGCGGCTCAGCTCGCCGCACACGTACATCTTCCACCGCCGCATCCACACGGGCGAGCGGCCGTGCGTGTGCCACGTGTGCGGCAAGCAGTTCCGCGCGCCCAACGGGCTGCGGCGCCACCTCACGGAGACGCACGAGCGGCGCCGCCGGCCCGCGTGCCGCCGCTGCCTGCGCACCTTCGCCAACTCGCAGAACCTGAAGCAGCACATGCGCACGCACACGGGCGAGCGGCCGTACGAGTGCGGCGCCTGCGGCAAGCGGTTCGCGCAGAGCGGGTCGCTGCACGCGCACCGCGCCACGCACGGCGGCGCGCGGCCGCACGCGTGCGCGGAGTGCGGCGCCGCGTTCCGGCTGCGCGCGGGGCTGGCGCGCCACCGGCTGCGACACTCGGGCGCGCGGCCACACGCGTGCGCCGCCTGCCCGGCCGCCTTCCGCCAGCGCCACGAGCTGGCGGCGCACCGCGCGCTGCACGAGGACGCGCGCCCGCACCGCTGCGCCGCCTGCCCCGCCGCCTTCCGCCAGCGCCGCGCGCTGCGCCACCACCTCAAGCGGCTGCACCACGACCCGCCCCCCGCGCCCGCACCCCCGCCGCCCTACACCTCGCTCTAG
- Protein Sequence
- MDSKQVFIVTSSELNEHNPLQQEFDIPVIDAEEASTSSMCPQPALSPSRERMCRLCASLTEFVVPIFEGEGLQNSLADKIHQHLPIQVSPSDVLPVVMCFQCTSTLLAWHELVLCSVQADSAMRERFNLRFSTTQGQKQQTIEANQHQVKHDKSQLDKNIKSVLSEYSHSLSMEEDGQVQSVCQKCCPNVTLTTAHFVEHLKSEHTAEIQNRNAIHDFIKNYVTFVEILLSDSERDGASDSTEESKKPEAKRSSTLLCPYCESAFSSATRLMYHLNSHGKISLEDGVDCCGHVYNDRKHLVRHLQEMHANRAPGADTACRSCGHRARSADELRAHVAEQHADTERARGGGLESGRNQKTIPAVCPECNKTFSNKYNMFAHMRAHSRCEAHRCARCPRSYSTRGNLAAHERLAHGGALPVRCARCGERFPTRAARDTHQRAHDAARPYRCHLCDKRFPAKNSLDRHRDMHLDVRNHKCPLCDRAFRKSSHLTAHARTHRRAVGVETPGPLAHIGRIEDEVGFVDDPGGTGSDTDDDRPLADLVPRRDAEFRTFYEALVKLREHIVEEHGRSDKEPAERAGDPSEEEADGYDDLSPRNMRRDRLDAGTRRELAAARVLVGPRLLYACPDCGKRLSSPHTYIFHRRIHTGERPCVCHVCGKQFRAPNGLRRHLTETHERRRRPACRRCLRTFANSQNLKQHMRTHTGERPYECGACGKRFAQSGSLHAHRATHGGARPHACAECGAAFRLRAGLARHRLRHSGARPHACAACPAAFRQRHELAAHRALHEDARPHRCAACPAAFRQRRALRHHLKRLHHDPPPAPAPPPPYTSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -