Cpus013737.2
Basic Information
- Insect
- Cabera pusaria
- Gene Symbol
- -
- Assembly
- GCA_954871355.1
- Location
- OX940892.1:20704479-20715681[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.013 1.8 10.5 0.9 3 23 652 673 651 673 0.90 2 24 2.3 3.4e+02 3.4 1.6 3 23 1015 1037 1014 1037 0.85 3 24 0.026 3.7 9.6 0.5 1 21 1042 1062 1042 1063 0.96 4 24 3.1 4.5e+02 3.0 0.3 1 23 1101 1124 1101 1124 0.92 5 24 0.0001 0.015 17.1 1.2 2 22 1134 1154 1133 1154 0.94 6 24 0.69 99 5.1 0.6 2 23 1162 1184 1161 1184 0.92 7 24 0.15 22 7.2 1.2 3 23 1205 1226 1203 1226 0.96 8 24 0.00074 0.11 14.4 0.5 1 23 1232 1255 1232 1255 0.95 9 24 0.13 19 7.4 0.0 1 23 1281 1304 1281 1304 0.90 10 24 0.019 2.8 10.0 3.4 1 23 1309 1331 1309 1331 0.97 11 24 0.14 21 7.2 0.8 1 23 1337 1360 1337 1360 0.95 12 24 0.0068 0.99 11.4 2.1 1 23 1373 1395 1373 1395 0.97 13 24 0.00018 0.027 16.3 1.8 1 23 1444 1467 1444 1467 0.97 14 24 0.0014 0.2 13.6 2.9 1 23 1526 1549 1526 1549 0.96 15 24 0.0021 0.3 13.0 1.5 2 23 1571 1593 1570 1593 0.95 16 24 0.09 13 7.9 0.1 2 23 1599 1621 1598 1621 0.93 17 24 0.01 1.5 10.8 0.2 1 21 1665 1685 1665 1686 0.95 18 24 0.0013 0.18 13.7 0.6 1 23 1696 1718 1696 1718 0.93 19 24 0.00012 0.017 17.0 0.3 2 23 1807 1829 1807 1829 0.93 20 24 3.4e-07 5e-05 24.9 1.4 3 23 1836 1856 1835 1856 0.98 21 24 0.014 2 10.4 0.0 1 23 1877 1900 1877 1900 0.95 22 24 0.14 20 7.3 0.0 1 23 1921 1943 1921 1943 0.98 23 24 0.028 4.1 9.4 0.6 1 23 1949 1972 1949 1972 0.95 24 24 0.00026 0.038 15.8 0.4 1 23 1980 2003 1980 2003 0.96
Sequence Information
- Coding Sequence
- ATGAATGTGAACTGTGATCGTGTTTGTAGACTATGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTCGTCTCGAAAATCAAGGATTGCGTGTCAGTTCAGATAAACGAAAATGACGAACTGCCGACAAATGTCTGCAGGAAATGCATGGACAATGTCAACAACTGGCATATATTCAAGGCTGTGGTTGAAAAGACTCAAAACAAACTAGAGTCTCTGATTAAAAAGGATGGCAGCCTACTAGAAGAGGTGAAAATAAAGAGTGAACCATATTCTGATGAGACTTATGATGAAGGAGTGGTTATTGATGGATCTTATCCAATCATTGAGAATGTGGCCTCTACAAGCAAACTTCAGCCCGAAGGTCCACCTATATTGGCGTCCTTGGGCCTCACGCCTAGGAGTGATAAGACCAATGTGGATCCTCGAATGGACTGGCATCGGGTCCATGCCATACTGAACATGGTGGAAGAAAACAATATCATTGATACACTCCAATCCACAGAAGAGACCGATATCCTTCATCATTCCGACCACGATTCGGAGTCTGAAGGAGAACTCCAATCAGACCTGAATGACACTTACATCCACTGCAGAGAAGGCTACAGGTGCCGAGACCAAAGCGTCTTATCAAAGAACCCTCGCATTTCGGAAAAGGCTAGCGACGCTCGCATAAACGAGGCCAATAAACTGAGAAAACGTAAAGTCGTTGCAACGAAGCATTGTCCTCGACCTAAAAACGCGTGGCAGCTACTGTTCACAGACGATCTACTCGAGCTCATTGTAACGTCGACCAATGagaaaattatgagacacggcAAAGCTTACTCCAAGGTCACCAACGCGGATGAAATAAGGACTCTGATTGGAGTTTTATATCTACACGGAATAATGAGATCGATCTATGAGAATCACGTTGACCTTTGGGACGGACAGTGCGGTCTCCAGTGTGTTAAGAAAGCTATCACTTACGACCGCTTCACCTTCCTCCTTCGATACTTGAGTTTCGATACCGAAAATGATGACAATCTCATCCGCTTCGACAGTATGGGGCGCATAAGAAAAGTCTTCGAGATTTTCGCTCTGAATTGCAGGACGGCCTTCGAAATGGAAACCGTCGCGGTCGTGGACGAGATCATTGTGCCAGTTTACGGACCTTGCCCTTTCCGATACGACATCGATAAGAAATCGCTGAAACGTGGCATCAAAATGGTGATGCTGGTTGATCCGACAAATTTCTATGTGGGGAATATAGATGTCGTGACGGACCCTTACTTCGGTGCCGAGGAGATAGTCAAAAAGATGACTCATCATCTATTCGGGTCAGGAAGAACCATCGTAATGGACAGCTGGTATTTTTCGAAGCGACTCATGTACTCGCTGAAGGCGTACGATCTGTATACGGTGGCAGCGTTGAATCCACAAGATGAAAAAATACCGCCGCTATTTCTGTCCAAATATAGAAAAACCCGCACGTTCATGTCGGGATTCCTAGATGAAGAAGTGTCACTGACATCATATGTGGATTCAAAGTCGAAGTCTATAAACGTGATTACGAACGAGCCGAAGTTCTATAGAAGAGGGTCGAACATCAATCACGTGACTGCAGTGTCAGTTTACAAGAAAAACCAGTCAGCGGTGGAAGTGCTTGATGTTCTCATGCATTACTACACGACGATGCAGCACACAAACGACTGGACTGTTTCTTTGTTCTGCACGTTGTTGAATATAGCTTCAGTCAATGCCCAGGGGGTGGAGAGTGAAAATAATGAAGAAGACTTCGAGGAAGAAATGAACGGGCTTCCAAAACCAGTCAAAGTGCCCAACATGCCTGAAGTGTCCATAACTGTGATGCGACCCACCGGTGAGACCCTTCACGCTCGGCAAGGTATCCAACAACTCGCGTCCAAAGACTGCCTCATCTGCGGACGTTCCTACAGATATTCTCACAATGCCCGTAGGCATGAACTCGCGTCTCACAGCTTCGACCGCTACACCAACAAATTGACAAACAAAAAGGCTCCCAAACTTAGACCGAACCCATTCAATCCCAAAGCGCGACTGATGCCCAATCCCATCAGCCACAAACTGCAATTCATGCCCAAAAATATACCCGCCAAAATTGTACCACAGAAAGTTATCCTCCCACCAAAACCGATACCCATCAAAACTCCTAAAGTACATAATAACTTACCGTATCCTCTCCGCATTAAGGCGCTCAAAGACTTACAGATAAAGAAAAAAGAACCGCAAATTTTGAAAACTCTGCTCACTTCGAAACCCGAAGTTTTAGTTTCCGAACCGGAGATTATGAACTCTGGCCCAGAGAGTCCTGAAACGTTGATATCAGAGCCTGAAATCGCGTCCTTCCAAGTGGAGACCATTTTATCTGAAGACCCGATCGAATACGACCAACATCAAGAGGAGCAAGGCGAGGAACATAATCCATCGACAAATTACGATACAGTGGATATGGAATCTGAACACGAAATCGAGATTGCTCGGCAGCAGGGACACGAAGCTGAAATAGAGGAAATTACTGACGGAAACGAGCTTCAACAAGATAATAATTTGGACGATGGTGACAAACATGAGAGTGAAAACGAAGGAGATCACGATACTGTAGACAGTCAGGAAAATATTGAAATAGATAGCCAAGGGCAGTTGGATATCGACGAGGGTGCAGAAGCTCTCGGCGGCAAAGAGGGTGACGAGAATGTGAAAAATGAAGATCAAGATCATGTGGTCAACCCCGACGCGGAGGAAAACGATGACGACGATATGCCGACGGCTCCTACCGCTGAACTGAACGAAGAAATACAAAACAACTCCTCCAGCGAAATGAACGAGGAAGACGAAGAACTGGATGACACCGCCGGCGGTTTGGACCAAACCGTTGAACCAACTAAAGAACTCAACCCCGACAAAATGTACATCAGTAAAACCCAACGAGATTTCATCATCAGATACCGTGATGTCATCCAGCAAATTAACACTAAGAAATGTCTCTGTTGCGATAAAACTTACCCAAGAAGAAAGGCCGTGGTTCAGCATTTACAGAAAAACGGTCATAAAGTTCCTAAACACACGTGCTACAACTGCGTGACAACGTTCACTCATATCGGCGCCCTGTTGAGTCACATGAGAGCTAACGCTTGCACGGATCTCTGGAAGATCATATACGATGACAACGCTATTCCTGTAGTGGAGGGCGAGCCAAAAGTTAAGGTGCAGTCGAAGGATATTTTCAACGCACGGTCGTACGCGTGCAGATTTTGTCCCGCCAGATTCCAATTGAAACAGTCTATAATGAAACATATTTCAGACGTACATGAGGATGGGCAGTCCTCAGTTCCACTCACTTGCTTGCACTGTCAAATAAAGTTCAAAGACAAATCTCTGCTCAAAAAACACATTCGCGTTGGCGAGTGTACGGTATACATACACTGTGATTTATGCACAGAACAGTTTTCCAACATGCAAGATTTCAGTGACCACGCTCTATCGGTTCACGCAGACCACTTCGAGAATTCGGAAAATCTCAACAAATGTATCGACGGGCGCGTCACCGACTGTTCGATCTGTGGGAAGAAACATAGTAACTACCTGACTCTAGTGAAACATTTGAAGGTGGTTCACAACGAGGATCGGCCGCATTACTGTCAGAATTGTGACGCGAAGTTCGAGCAAGCCGCCGACCTGAACAAGCACATATACGTGGAACATTCGGACCAGGCTCTAGGCCTGCAGCCGCTCGAGCCGGACATGTCTCTCGTCAAAGAAGAAGCCGAAGAGTACCACTACTCGTGCACGGAATGTAACGCCATCTTCGAGACGGTGGATGCGTGGACAGATCACCAGGTGGCGGAGCACAACCAAGTCGCTCATCACTGCGATCAATGCGAAAAGAAGTTCCTAAGGCCGTCGGAACTAGCGGAACACAAAAATACTCACTTGAGGGTTAAGTTTTATCCTTGCAGCGTGTGTGCGAACTCTTACAGCACACCTCAGAAGCTGTCCGACCACGTCCAACAGTGCCACCCAGGAGCGGGCAATACCGCCGGCTCGGAATCAGATTTCTTCTGCGACACCTGTATCAGATCCTTCAAGAGTCGACAAGCCTTCTCCAATCACATGCGCATCCACGCTAAAGTACCCACCACTAACAGAAAGCCGGGTGAGATGAAAGGCTTCGACCCGCGCATCATCGGCAAGCCGATTAAACAGTTTACGATGGTCCAGCCCGGCTTCGTCAATTTCAAACCGAACACGAACGTTCCAAACGCGCCTTACTCCTGCGATATATGTGGCAAGGGCTTCATGCACAAGAAAAATATATGGAAACACAAGAAAGTGTTACATGCAGATATCATTACCGACAGAAACGACAGCGAGGAGAACACGATGCACGCGTCCACCGAAGACGATGACTACAATCCCGACGAAAATGGGGCTCTTTCGACTCCACAGTTCAACAGTTTCAATTTCTCCAACTTCGGCAATAGCACGCCGCTCGCGCAACCCGACCCTATGCCCTACTCCTGTGAACTGTGCCACAAGCGATTCCCGCTCAGAACCAGTCTGTGGAGACACAAACGCGCCAAACACGGCATCGTGAACCCCGGCGCGAACGACAGTACTGCGCAAACGTCAGGCGATGGTGGACGCTCCAGCTGCACTATCTGTAAGATAACTTTCGCGGATAAGAAATCCTACTATCGCCACAGGAAGAATGTTCACAAGAACGCCACGCAAATGTGCAAGATTTGCGGTAAACCTCTCAACTCTACTTTGGAACTGTACGAGCATTTGAAAGCAGCGCACGCCCGCGAGTTGCTAGGGTTCAATGCGAACCAGGGCTCTAGTAAATCACAGGAAGTTACTCAAGATTTGGAACCTGAATACGATCCGGAACCGGAGCCGGTCGACCCCAACATAGATTACCAGGCTCGGTATCCGTGCGACACGTGCGGCAAGCAGTTCGTCGGCTTGCTCGCGTTACAGAACCATCAATGTATAAACCAGCTCCCGACGCAGCCGCAGACTTTCGACTGTGAAATCTGTCATAAAAGTTACACGTCCATAGCTGCGTTGAAGAGCCACCGCGGGTGGCATCTGCGCTCGCCCGACGGCAAAGCGGCGGCCAACAACAGTGGGCTCTGGATGCCACAGCATAAAGTCACCAGCAAAGTGAGCAAGCACGAAGTCGTCGAAGCGGCTGCGGCCGCGCGTCCCGTACTCGCGACTCCCGCTGTTCCCGTAAGCGCTAAACGGAGATTGCCACCTGAGGTCGAAGTGACCGTCGTCAATCCGAACAAAAAGCTGCGATCCGACGACTCCGTAGAAATGGAACTCAACACCGACGGTGTAGAAGGAAGGTACTGCACTATCTGCGACAAGGAATTCACGAAACGCGCCGCGTACCAACGTCACATGGACGAGGTTCACCAGCCTAACTCCGTGTTTTGTCCGGTTTGTGACAAGAGTTTCACGCGGAAGTCGACGCTTCTCGTTCACATGAAGAAGCATTATGAGACCGGAGAGGGTAGTACTTCGGCCAGCGGGCAGATGGAGATCGAAGATGATGGTTACCCTTGCGACGTGTGCGGGGCTTCTTACGATACGGAGAAAGCGTTGAGAGGCCACAAGGCGAGAGCTCACGCGGACGATTCCGCTGAATCGGAAGATGACGGTGCCGTGCAGACGATTCAACCGGGAGAATTCACGTGCGGCCAATGCGGAGACGGAGTTGCCAGTCCACGCGACTTGATCGCTCATCGCTCCATGCACACCACTCCTACCAAATTCTTTTGCAATATCTGCAAGGTTTATTTTGCACGAGCGTTGGACCTCTCCTCCCACACGCGCGCGCGACACTCGGATAATGAAAAAGTGTTCTTTCCCTGTGCCATGTGCGACCGATTCTATATGAACAAGAAGAGTTTACAGCGCCACATTGAGATGGCGCATTGA
- Protein Sequence
- MNVNCDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLVSKIKDCVSVQINENDELPTNVCRKCMDNVNNWHIFKAVVEKTQNKLESLIKKDGSLLEEVKIKSEPYSDETYDEGVVIDGSYPIIENVASTSKLQPEGPPILASLGLTPRSDKTNVDPRMDWHRVHAILNMVEENNIIDTLQSTEETDILHHSDHDSESEGELQSDLNDTYIHCREGYRCRDQSVLSKNPRISEKASDARINEANKLRKRKVVATKHCPRPKNAWQLLFTDDLLELIVTSTNEKIMRHGKAYSKVTNADEIRTLIGVLYLHGIMRSIYENHVDLWDGQCGLQCVKKAITYDRFTFLLRYLSFDTENDDNLIRFDSMGRIRKVFEIFALNCRTAFEMETVAVVDEIIVPVYGPCPFRYDIDKKSLKRGIKMVMLVDPTNFYVGNIDVVTDPYFGAEEIVKKMTHHLFGSGRTIVMDSWYFSKRLMYSLKAYDLYTVAALNPQDEKIPPLFLSKYRKTRTFMSGFLDEEVSLTSYVDSKSKSINVITNEPKFYRRGSNINHVTAVSVYKKNQSAVEVLDVLMHYYTTMQHTNDWTVSLFCTLLNIASVNAQGVESENNEEDFEEEMNGLPKPVKVPNMPEVSITVMRPTGETLHARQGIQQLASKDCLICGRSYRYSHNARRHELASHSFDRYTNKLTNKKAPKLRPNPFNPKARLMPNPISHKLQFMPKNIPAKIVPQKVILPPKPIPIKTPKVHNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIMNSGPESPETLISEPEIASFQVETILSEDPIEYDQHQEEQGEEHNPSTNYDTVDMESEHEIEIARQQGHEAEIEEITDGNELQQDNNLDDGDKHESENEGDHDTVDSQENIEIDSQGQLDIDEGAEALGGKEGDENVKNEDQDHVVNPDAEENDDDDMPTAPTAELNEEIQNNSSSEMNEEDEELDDTAGGLDQTVEPTKELNPDKMYISKTQRDFIIRYRDVIQQINTKKCLCCDKTYPRRKAVVQHLQKNGHKVPKHTCYNCVTTFTHIGALLSHMRANACTDLWKIIYDDNAIPVVEGEPKVKVQSKDIFNARSYACRFCPARFQLKQSIMKHISDVHEDGQSSVPLTCLHCQIKFKDKSLLKKHIRVGECTVYIHCDLCTEQFSNMQDFSDHALSVHADHFENSENLNKCIDGRVTDCSICGKKHSNYLTLVKHLKVVHNEDRPHYCQNCDAKFEQAADLNKHIYVEHSDQALGLQPLEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCANSYSTPQKLSDHVQQCHPGAGNTAGSESDFFCDTCIRSFKSRQAFSNHMRIHAKVPTTNRKPGEMKGFDPRIIGKPIKQFTMVQPGFVNFKPNTNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIITDRNDSEENTMHASTEDDDYNPDENGALSTPQFNSFNFSNFGNSTPLAQPDPMPYSCELCHKRFPLRTSLWRHKRAKHGIVNPGANDSTAQTSGDGGRSSCTICKITFADKKSYYRHRKNVHKNATQMCKICGKPLNSTLELYEHLKAAHARELLGFNANQGSSKSQEVTQDLEPEYDPEPEPVDPNIDYQARYPCDTCGKQFVGLLALQNHQCINQLPTQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVEAAAAARPVLATPAVPVSAKRRLPPEVEVTVVNPNKKLRSDDSVEMELNTDGVEGRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYETGEGSTSASGQMEIEDDGYPCDVCGASYDTEKALRGHKARAHADDSAESEDDGAVQTIQPGEFTCGQCGDGVASPRDLIAHRSMHTTPTKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -