Basic Information

Insect: Cabera pusaria
Gene Symbol: -
Assembly: GCA_954871355.1
Location: OX940913.1:10419621-10444023[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 33 0.66 95 5.2 0.4 1 23 28 50 28 50 0.89

2 33 0.0032 0.46 12.5 0.2 2 23 78 100 77 100 0.96

3 33 1.8e-05 0.0027 19.5 2.9 2 23 124 145 123 145 0.97

4 33 0.037 5.3 9.1 1.9 2 23 149 170 148 170 0.96

5 33 0.0034 0.48 12.4 2.5 1 23 175 198 175 198 0.96

6 33 1 1.5e+02 4.5 3.7 2 23 210 232 209 232 0.94

7 33 0.00088 0.13 14.2 0.8 1 23 238 261 238 261 0.96

8 33 7.4e-05 0.011 17.6 1.8 2 23 266 287 265 287 0.96

9 33 0.0003 0.044 15.7 2.7 1 23 293 315 293 315 0.97

10 33 0.11 16 7.6 3.1 1 23 368 390 368 390 0.98

11 33 0.031 4.5 9.3 0.2 2 23 418 440 417 440 0.96

12 33 0.1 15 7.7 7.4 1 23 463 485 463 485 0.98

13 33 0.044 6.3 8.9 0.5 2 23 490 511 489 511 0.95

14 33 0.00023 0.033 16.0 1.5 1 23 516 539 516 539 0.92

15 33 0.44 63 5.7 5.4 1 23 589 611 589 611 0.98

16 33 0.3 43 6.2 0.4 2 23 639 661 638 661 0.93

17 33 0.00093 0.13 14.1 6.3 1 23 684 706 684 706 0.98

18 33 0.095 14 7.8 0.7 1 23 710 732 710 732 0.96

19 33 0.00018 0.025 16.4 0.8 1 23 737 760 737 760 0.92

20 33 0.44 63 5.7 5.4 1 23 810 832 810 832 0.98

21 33 0.21 31 6.7 0.2 2 23 860 882 859 882 0.94

22 33 0.0013 0.18 13.7 6.1 1 23 905 927 905 927 0.98

23 33 0.24 35 6.5 0.8 2 23 932 953 931 953 0.96

24 33 0.00018 0.026 16.4 1.5 1 23 958 981 958 981 0.94

25 33 0.44 63 5.7 5.4 1 23 1032 1054 1032 1054 0.98

26 33 0.33 48 6.1 0.3 2 23 1082 1104 1081 1104 0.93

27 33 0.0013 0.18 13.7 6.1 1 23 1127 1149 1127 1149 0.98

28 33 0.22 32 6.7 0.3 2 23 1154 1175 1153 1175 0.95

29 33 0.00071 0.1 14.5 2.1 1 23 1180 1203 1180 1203 0.94

30 33 0.69 99 5.1 3.0 2 23 1213 1235 1212 1235 0.94

31 33 0.00018 0.026 16.4 0.4 1 23 1241 1264 1241 1264 0.97

32 33 0.00056 0.08 14.8 7.8 1 23 1296 1318 1296 1318 0.97

33 33 0.00098 0.14 14.0 0.4 1 23 1327 1350 1327 1350 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	33	0.66	95	5.2	0.4	1	23	28	50	28	50	0.89
2	33	0.0032	0.46	12.5	0.2	2	23	78	100	77	100	0.96
3	33	1.8e-05	0.0027	19.5	2.9	2	23	124	145	123	145	0.97
4	33	0.037	5.3	9.1	1.9	2	23	149	170	148	170	0.96
5	33	0.0034	0.48	12.4	2.5	1	23	175	198	175	198	0.96
6	33	1	1.5e+02	4.5	3.7	2	23	210	232	209	232	0.94
7	33	0.00088	0.13	14.2	0.8	1	23	238	261	238	261	0.96
8	33	7.4e-05	0.011	17.6	1.8	2	23	266	287	265	287	0.96
9	33	0.0003	0.044	15.7	2.7	1	23	293	315	293	315	0.97
10	33	0.11	16	7.6	3.1	1	23	368	390	368	390	0.98
11	33	0.031	4.5	9.3	0.2	2	23	418	440	417	440	0.96
12	33	0.1	15	7.7	7.4	1	23	463	485	463	485	0.98
13	33	0.044	6.3	8.9	0.5	2	23	490	511	489	511	0.95
14	33	0.00023	0.033	16.0	1.5	1	23	516	539	516	539	0.92
15	33	0.44	63	5.7	5.4	1	23	589	611	589	611	0.98
16	33	0.3	43	6.2	0.4	2	23	639	661	638	661	0.93
17	33	0.00093	0.13	14.1	6.3	1	23	684	706	684	706	0.98
18	33	0.095	14	7.8	0.7	1	23	710	732	710	732	0.96
19	33	0.00018	0.025	16.4	0.8	1	23	737	760	737	760	0.92
20	33	0.44	63	5.7	5.4	1	23	810	832	810	832	0.98
21	33	0.21	31	6.7	0.2	2	23	860	882	859	882	0.94
22	33	0.0013	0.18	13.7	6.1	1	23	905	927	905	927	0.98
23	33	0.24	35	6.5	0.8	2	23	932	953	931	953	0.96
24	33	0.00018	0.026	16.4	1.5	1	23	958	981	958	981	0.94
25	33	0.44	63	5.7	5.4	1	23	1032	1054	1032	1054	0.98
26	33	0.33	48	6.1	0.3	2	23	1082	1104	1081	1104	0.93
27	33	0.0013	0.18	13.7	6.1	1	23	1127	1149	1127	1149	0.98
28	33	0.22	32	6.7	0.3	2	23	1154	1175	1153	1175	0.95
29	33	0.00071	0.1	14.5	2.1	1	23	1180	1203	1180	1203	0.94
30	33	0.69	99	5.1	3.0	2	23	1213	1235	1212	1235	0.94
31	33	0.00018	0.026	16.4	0.4	1	23	1241	1264	1241	1264	0.97
32	33	0.00056	0.08	14.8	7.8	1	23	1296	1318	1296	1318	0.97
33	33	0.00098	0.14	14.0	0.4	1	23	1327	1350	1327	1350	0.96

Sequence Information

Coding Sequence: ATGACTTCATACGAGCGACAAAACGCCGCCACTTTCCTCGAATACACTACCGCCAGGCCCTTCCTCTACCAACAAGCTAACTACAAGTGTTTCTACTGCAGCGAGATCTTCACAGAGGTCCAACCTGTTCTAACTCACACGGCAACTCATGTCACTCCCAGCAGACAATCTCTACTCAAGCAATATCTTAGAAAAGGAAAGCGAGTGATCAAGGTTGACGTTTCTGGATTGAAATGCAATATCTGCAACCTCAAGTACTCAGAATTGGATGATGTTAGAAAGCATTTAATTACTGCACATAAGAAGGAATTCAACTCAGCCGGAAACGGATTAATAGCCTACAATCTAAGCACTTCGAATGGACTTCTTTCCTGTCACAAATGCGGCAAAGAGTTTAACTCCTTTTTCCTATTAAACCGGCATATGAACGTgcattatagcgtagtctgcgAAACCTGTGGTCTCGGATTCATGTCCCACCACAGATTGACAAACCATAGACTAGTCCACCAGAACGGTACCCACAAGTGTGACCAATGCGAGGAAGTCTTCCCAACTAAAATCAAACTTCGCTACCACATCTTCAAAAGGCACGAGAAGACGAATGTGAAGAAATTGAAGCCTCTAAAATGTCCGCATTGTTTGGAGAGGTTCTCCGAGCATTATAAGAAGATGTCGCATTTGAAAGAAGTTCATGGCATCACGTTTACATTTGAATGTCCAACGTGTAAGACTGTCTTTCAGACGAGGCGAGCTCTAACAGACCATACGACTAAAGTGCATACGAGGAAGAAAGAATGCAAAGTTTGCGGGAAATGTTTCGCTACTACCACTTTGCTGAAACTCCATGTGAGAGGGCATACTGGGGAGAGGAATTTCTTCTGTAACATCTGTCAAAAAGCCTATATGCATGAGAGAACTTTGAAATTACACATGAGGGTGCATGGGCCTGTGTGGAAATTGGTGTGTCCGCAATGTGAAacaaacatcgataagaaagcAAGCACCAATCTTTGGGATCTCAGCATATCCGAGAGGACCAACGCGTCCAATATCATCCAGCTCACCACAGCCAAGCCCTTCCTCTTCTGCGGTTACTTTTACaaatgcttcttctgccacgAACAATACTCCGACATCAAGAAACTCCTTGATCACACTGCCACGCACGAAATACCAGACCAAGCGAACATTCTAAAAGAACTACTCAAAAGAGGACGAAGAACAGTCAAAGTCGACATATCAGAATTGAAATGTAGATTCTGTGACATGGAATTTACTGATCTGGATGTGATTAGGAGGCACTTGGCAACAGAACATAAAGTAGTTTTCTCTGAATCTGGGAATGGAGTCGTAGGATACAACTTAGCGACGAAGAACGAGATGTTTTGCTGCCATATTTGTAGCAAGAAATTACATACGTTTATCCTTCTTAACAGGCACATGAATGTCCATTTCAATGACTCAGTTTGTGAGATATGCGGGTCTAGTTTTATGTCGCATGCACGACTTATGCAGCATAAAGAAATACATGCCCCTGGAGGGTACCTTTGCAACCAATGCGGCAAAGTCTACACAACCAGCTCTAACCTTAGATTCCATAAACAAAAAGCTCACGAAGGGAATGGAAAAATGCGAACAAACTCTGATGTGAAAACACGAGCTGTGACAAGTATTTGGGAACTCACCATAACCGAGAGGATGAACGCTTCCATCTTTGTCCAGTTCACCACAGCCAAGCCCTTTGTCTACTGCAGACTCTTCTTCAAATGCTTCTTCTGTCACGAACACTACTCCGACATCAAGAAACTCCTCGACCACACTGCCACGCACAAAATACCAgaccatacaaaaatactaaaagaaaTACTCACAAAAGGAAGAAAAACAGTCAAAGTCGACATCTCAGAATTGAAATGTAGGTTGTGTCAGATGGAATTTACTGATCTGGATGTGATAAGAAGGCATTTGGTATCAAAACATCAAGTGGTTTTTACTGAATCTGGAAATGGTGTCGTAGGATACAACTTAGCGACGAAGAACGAGCAGTTTTGCTGCCATATTTGCAGCAAGAAATTTCAAGATTTTATGTCTCTCAACAGGCATATGAATGTTCATTTCAGTAACTTCGTTTGTGAGGTTTGCGGGGCTGGTTTTATGACGCATCAACGGTTCATGCAGCATAAAGAAGTACATGCCCCCAGAAAATATCCTTGTAAACAATGTGGCAAAGTCTACAAAACCAGCTCTTACCTTAGATTCCATATAGGAAAAGCTCACGAAGGGAATAGAAAAATGCGAGGCAACTTTGATGAGAAAGGACAAGCTGTGACAAGTCGTTGGGAACTCACCATATCCGAGAGGATTAACGCGTCCACCTTCGTCCAGTTCACCACAGCCAAGCCCTTCGTCTTCTGCAGATACTTTTTTaaatgcttcttctgccacgAACATTACTCCGACATCAAGAAACTTCTCGACCACACTGCCACGCACGAAATACCAGACCAAGCAAAAATGCGGAAAGAAATACTCCCAAGAGGACGAAGAATAGTTAAAGTCGACATATCCGTATTAAAATGTAGATTCTGTCAGATCGAATTTACTGATCTGGATGTGATTAGAAGGCACTTGGCGTCAGAACATAAAGTAGTTTTCACTGAATCTGGAAACGGAGTCGTAGGATACAACTTAGCCACGAAGAACGACTTGTTTTGCTGCCATATTTGTAGCAAGAAATTTCAGACTTTTATCCTTCTTAACAGGCACATGAATGTTCATTTCAGAAACTCGGTTTGTGAGGTTTGCGGGTCTGGTTTTATGACGCATCAACGACTCGTGCAGCATAAAAAAGTACATACATCCGGAGGACATCCATGTAAACAATGTGGCAAAGTCTATACAACCAGCTCTAGCCTTAGATTCCATATAGAAAAAGCTCACGAAGGGAATAAAAGAAAAATGCGAGCCAACTGTGATGTGAAAAGACGAGCTGTAACAAGTCTTTGGGAACTCACCATATCCGAGAGGATCAACGCGTCCACCTTCGTCCAGTTCACCACAGCCAAGCCTTTCGTCTACTGCAGATACTTCTTTaaatgcttcttctgccacgAACACTACTCCGACATCAAGAAACTCCTCGATCACACTGCCACGCACGAAATACCAGACCAagcaaaaatactaaaagaactACTCAAAAAAGGACGGAGAACACTCAAAGTTGACTTCTCTGGATTGAAATGTAGATTTTGTCAGATGGAATTCACAGATCTGGATGTGATTAGAAGGCATTTAGTATCAGAACATAGAGTAGTTTTCACTGAATCTGGAAATGGAGTCGTAGGATACAACTTAGCCACGAAGAACGACTTGTTTTGCTGTCATATTTGTAGCAAGAAATTTCAGACTTTTATCCTTCTTAACAGGCATATGAATGTTCATTTCAGTAACTCAGTTTGTGAGGTTTGCGGAGCTGGTTTTATGACGCATCAACGGCTCGTGCAGCATAAAGAAATACATGCCCCCGGAGGGCATCCCTGCAAACAATGCAGCAAAGTCTATACAACCAGCTCTAACCTTAGATTCCATATAGAAAAAGCTCACGAGGGCAATAGAAAGATGCGAATGCTACGATGCTCTCAATGCCCTGAGAGATTCACAGAGCATTTTAAGAAGATTAAACATTTGAAAGAATCTCATGGCATTACTTTTACGTATGAATGCGAGGTTTGCAATGCTATCTTCTCTAGTAGAAGAGCGTTGACTACGCATACAAATAGACAGCATTCTGAAAAGACTCAGTGTGAAGTGTGCAAGAAATGCTTTAGTTGCGTCACAACGTTACGAATCCACAAGCTCTGCCATTCAGAAGAGAGAAACCACATCTGTAGTATGTGTCAGAAGTCATATAGACATAAGAAGAGCTTAAAATACCACATGAAAAGTCACGTGAACGGAGATCAGTTAGTTAAGTTCACATGTCCTGAATGTGGCAGTGGGTTTCAAAGTAGAAATGAGTTTAACAAACATGTTAAAGAATGGCATCCAAGTAGTTATTTTGACTACGTTGTGAGCTGA
Protein Sequence: MTSYERQNAATFLEYTTARPFLYQQANYKCFYCSEIFTEVQPVLTHTATHVTPSRQSLLKQYLRKGKRVIKVDVSGLKCNICNLKYSELDDVRKHLITAHKKEFNSAGNGLIAYNLSTSNGLLSCHKCGKEFNSFFLLNRHMNVHYSVVCETCGLGFMSHHRLTNHRLVHQNGTHKCDQCEEVFPTKIKLRYHIFKRHEKTNVKKLKPLKCPHCLERFSEHYKKMSHLKEVHGITFTFECPTCKTVFQTRRALTDHTTKVHTRKKECKVCGKCFATTTLLKLHVRGHTGERNFFCNICQKAYMHERTLKLHMRVHGPVWKLVCPQCETNIDKKASTNLWDLSISERTNASNIIQLTTAKPFLFCGYFYKCFFCHEQYSDIKKLLDHTATHEIPDQANILKELLKRGRRTVKVDISELKCRFCDMEFTDLDVIRRHLATEHKVVFSESGNGVVGYNLATKNEMFCCHICSKKLHTFILLNRHMNVHFNDSVCEICGSSFMSHARLMQHKEIHAPGGYLCNQCGKVYTTSSNLRFHKQKAHEGNGKMRTNSDVKTRAVTSIWELTITERMNASIFVQFTTAKPFVYCRLFFKCFFCHEHYSDIKKLLDHTATHKIPDHTKILKEILTKGRKTVKVDISELKCRLCQMEFTDLDVIRRHLVSKHQVVFTESGNGVVGYNLATKNEQFCCHICSKKFQDFMSLNRHMNVHFSNFVCEVCGAGFMTHQRFMQHKEVHAPRKYPCKQCGKVYKTSSYLRFHIGKAHEGNRKMRGNFDEKGQAVTSRWELTISERINASTFVQFTTAKPFVFCRYFFKCFFCHEHYSDIKKLLDHTATHEIPDQAKMRKEILPRGRRIVKVDISVLKCRFCQIEFTDLDVIRRHLASEHKVVFTESGNGVVGYNLATKNDLFCCHICSKKFQTFILLNRHMNVHFRNSVCEVCGSGFMTHQRLVQHKKVHTSGGHPCKQCGKVYTTSSSLRFHIEKAHEGNKRKMRANCDVKRRAVTSLWELTISERINASTFVQFTTAKPFVYCRYFFKCFFCHEHYSDIKKLLDHTATHEIPDQAKILKELLKKGRRTLKVDFSGLKCRFCQMEFTDLDVIRRHLVSEHRVVFTESGNGVVGYNLATKNDLFCCHICSKKFQTFILLNRHMNVHFSNSVCEVCGAGFMTHQRLVQHKEIHAPGGHPCKQCSKVYTTSSNLRFHIEKAHEGNRKMRMLRCSQCPERFTEHFKKIKHLKESHGITFTYECEVCNAIFSSRRALTTHTNRQHSEKTQCEVCKKCFSCVTTLRIHKLCHSEERNHICSMCQKSYRHKKSLKYHMKSHVNGDQLVKFTCPECGSGFQSRNEFNKHVKEWHPSSYFDYVVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -