Bhed008062.1
Basic Information
- Insect
- Byasa hedistus
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_029286795.1
- Location
- JAGSMW010000010.1:6235322-6236722[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 4 3.1e+04 -6.9 5.6 15 19 134 138 133 138 0.81 2 10 0.07 5.5e+02 1.5 0.4 4 10 169 175 168 175 0.96 3 10 2.1e-07 0.0016 19.2 15.5 3 19 186 202 185 202 0.95 4 10 1.8e-06 0.014 16.2 12.3 3 19 239 255 227 255 0.91 5 10 1.5 1.2e+04 -2.7 1.2 6 10 280 284 279 284 0.91 6 10 3.1e-09 2.5e-05 25.0 10.6 1 19 290 308 290 308 0.98 7 10 1.9e-06 0.015 16.1 16.1 3 19 345 361 337 361 0.86 8 10 2.1 1.6e+04 -3.2 0.9 5 10 384 389 384 389 0.89 9 10 5.6e-06 0.044 14.6 18.3 1 18 395 412 395 413 0.97 10 10 3.7e-09 2.9e-05 24.8 17.1 1 19 422 440 422 440 0.99
Sequence Information
- Coding Sequence
- atggcTAGAAGGTATCGAGACGCCGCTGCAAAATTGCAGCAAAATGTTCAAAGACATTTACAGGTAATGAAAGACCTCTCCTCGTCAGAGGATGAAGAACCGTTTGAAGCCAGCGTCCTCGACGGTGTATTCCAAAGTTACTGGAGGGGTGGTGGCGATACACAATTGCTAAACAGAACCAAAAATCTCCTGGAAGAAGCTTTAAGCGGCCGTAACATAACCTGTCTCATATGTATCGGTTCAATTAAACGGGTCCACGCTATTTGGAATTGTGATCATTGTTACTCATATTTCCATATTTCCTGCATACAAAAGTGGGCGAACGATTGTGTCAGTCTCAGAAGCGATGACAATCATGGCCCTATTGCTGTTTTCGTACCCAAGAAAATTGAATGGTGTTGTCCAAAATGTCGGCATTCGTACAGCAAAGAAGAGATCCCGCGTAAATATCtctgtttttgtaataaaacggATAATCCACCATTTCATCCATGGCTAATACCACATTCATGTGGGGAAGTCTGCGAAAAGAGACTTTCAACAGGCAATAATTGTAGACACAAATGCCTACTGCTCTGCCACCCTGGCCCTTGTCCACCTTGTCCACAGACTGTTAATGAAGTGTGTTACtgtcaaaaagaaaataaaagagtaAGATGTAGTGCAGGGAAATGGTCTTGTGGGCAACAATGTAGAAAAACATTGCCATGTAAAACACACAAATGCGAAAGTATTTGTCATGAAGATAATTGTCCACCATGCAGTTACACAAGTTTACAATCGTGCCAATGTGGtgctgaaaaattaaaaagaccATGTAATGATGTTGATTGGCATTGTGAGAAAAAATGTGCCAAGCCATTTTCATGCGGCTTTCACAAATGTGAGAAGATATGTCATTCGGGCGACTGTGGTTTATGTCCTAATTCAGGTTTAATGTCATGCCCATGTGGAGCTAATCAGCGTCATGTACAATGTCCTGATATAATGGAGACTTGTTTGGGAACATGTGGCAAGAAAAGAGAAGATTGTGAGCACTATTGCCCTGAAAAATGCCACAAGGGATCTTGCCCTCCTTGTCAGGTAATGGTGGAAAAGATTTGTCAGTGCTCAACACACACCAAGTCTCTACCATGCAGTAAAGAGTTCAAATGTGATTCAAAATGTAGAGGAACTCGGCCATGTGGCAAACATGCATGTGGACGCAAATGCTGCAACGGTAACTGTCCCCCGTGTGAAAAAGTGTGTGACAAGCCGTTACAGTGTGGCAGGCATAAATGCACTTCAGTATGTCATCATGGACCTTGCTATCCATGTCCACGGGAATCTAAAATAACATGCAGATGTAAAGAAACTTACATCACAGTGCCGTGTGGAAGAGAGAAAAACATTGCCATGTAA
- Protein Sequence
- MARRYRDAAAKLQQNVQRHLQVMKDLSSSEDEEPFEASVLDGVFQSYWRGGGDTQLLNRTKNLLEEALSGRNITCLICIGSIKRVHAIWNCDHCYSYFHISCIQKWANDCVSLRSDDNHGPIAVFVPKKIEWCCPKCRHSYSKEEIPRKYLCFCNKTDNPPFHPWLIPHSCGEVCEKRLSTGNNCRHKCLLLCHPGPCPPCPQTVNEVCYCQKENKRVRCSAGKWSCGQQCRKTLPCKTHKCESICHEDNCPPCSYTSLQSCQCGAEKLKRPCNDVDWHCEKKCAKPFSCGFHKCEKICHSGDCGLCPNSGLMSCPCGANQRHVQCPDIMETCLGTCGKKREDCEHYCPEKCHKGSCPPCQVMVEKICQCSTHTKSLPCSKEFKCDSKCRGTRPCGKHACGRKCCNGNCPPCEKVCDKPLQCGRHKCTSVCHHGPCYPCPRESKITCRCKETYITVPCGREKNIAM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -