Basic Information

Insect: Byasa hedistus
Gene Symbol: ZEB2_1
Assembly: GCA_029286795.1
Location: JAGSMW010000034.1:327835-334834[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00069 0.073 14.3 2.4 2 23 226 248 225 248 0.95

2 11 0.00067 0.071 14.4 0.2 1 21 254 274 254 275 0.95

3 11 0.16 16 6.9 3.6 1 23 280 302 280 302 0.98

4 11 0.11 12 7.4 1.3 2 23 306 328 305 328 0.95

5 11 0.0006 0.064 14.5 2.0 1 23 331 354 331 354 0.97

6 11 0.0027 0.28 12.5 2.5 1 23 357 379 357 380 0.95

7 11 0.051 5.4 8.4 0.1 3 20 389 406 388 408 0.93

8 11 0.00033 0.035 15.3 0.1 2 23 421 443 420 443 0.94

9 11 2.5e-07 2.6e-05 25.2 1.1 1 23 449 472 449 472 0.98

10 11 0.00033 0.035 15.3 0.4 3 23 483 503 482 503 0.97

11 11 0.00014 0.015 16.5 0.2 1 23 509 532 509 532 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00069	0.073	14.3	2.4	2	23	226	248	225	248	0.95
2	11	0.00067	0.071	14.4	0.2	1	21	254	274	254	275	0.95
3	11	0.16	16	6.9	3.6	1	23	280	302	280	302	0.98
4	11	0.11	12	7.4	1.3	2	23	306	328	305	328	0.95
5	11	0.0006	0.064	14.5	2.0	1	23	331	354	331	354	0.97
6	11	0.0027	0.28	12.5	2.5	1	23	357	379	357	380	0.95
7	11	0.051	5.4	8.4	0.1	3	20	389	406	388	408	0.93
8	11	0.00033	0.035	15.3	0.1	2	23	421	443	420	443	0.94
9	11	2.5e-07	2.6e-05	25.2	1.1	1	23	449	472	449	472	0.98
10	11	0.00033	0.035	15.3	0.4	3	23	483	503	482	503	0.97
11	11	0.00014	0.015	16.5	0.2	1	23	509	532	509	532	0.97

Sequence Information

Coding Sequence: ATGGCTAATGAAATAGAAGTAAATGTAGaaacaataaagaattttagtGAACAGTGTCGTACTTGTCTTAGCATTGGAAGAAAAATGGTGCCATCTGGAGAATTCGCTGACATCTTTAGAAGTATTACATCGGAATGTAAATGTATGccATCAAAAAGAAGCGAGGAATTGTTACTATGCTGGGAATGCCATTCGTTGTTGCGTAAAGTGAAAAGATTTCAAAATCAAGTGCAGAGAgcgaataaacattttatattaggACAGAGCCTGTTATATTCCCTGTCCAATCTGACCACtgttataatgaaaagtaatgaaccaaatcaaatatatatatttgatcaGAAGTTAGAGATGGATGAAGAGACTAATTGTATTTCAACGAACAAAGATCAATCTGATTTTGAATCAATTGGGAGCACTTGTAATTTTAAGAACATTCagaataaaaaagacattgatgttaatttattaaaaaaagaaaaatctaccAATGATAAGAAGAAAATTAGCAAATGGGCAGAAAAGAGGGCAATGCTCAACAAAAaacctaaattcaaaattattgatCGAAAGTCATCTCTGAGCAAAATTTtctcaaataataaattatttgaaaaggatgtatttaataatatcaaaaatcaAATTGTCCACACCAATATTGAACCTTTAAAATGTACAGAATGTGGgattggttttaaaaaaagaaagctGTTGGAGGTTCATACAACAAAATGTCATGGTGagGTCGAGTCTTATATTTGTGATGTGTGTCATAAGAATTTACCgaacaaaaaacaattgaGTGCCCATATAAACAATGATTGCTGTGTGTACAAATGTAGGATTTGTGATGAATTATGCTATGGTAAAAATCAAAGATGGCGTCATTTAAAAAAGCATAAAGTGttgcaatgtttaaaatgtgAATTACTTTTTGGgaCTCGTCAGGATTTCTTCAAACATTACAAACAGTGGCACGAGAAATTCATTTGTGACTATTGCGGTATCAGCTTCAAAATGAGGTACTGCATCGAGGATCATATAAAGAAGCAGCACACACCATTCGAATGCAAGTCGTGTTCGAAGCGTTTCGCCCGGTACAACGGTCTGTGGTTACATAACAAAATCCATCATGGCGGACCGTCCTCGCCAGCGTACTGCGTAGAATGCGACAGGAAGTATCCAGACAGCTACAGGTACAAATGGCACTTGGCGAACAGTACGAAGCACAAGCCGCGCCAAAAACTGAGGATCCCATGTCCGGAATGTAGTAAAGTATTCTCAAAGAACATATATATGAAGGATCACTACAACTTGGTACACTTGAAGAATTTCAAGTATCGATGTGAGGAATGCAACAAGAACTTCATCCGGAACGCGGATCTTACTAAGCACACCCGCAGGATCCACGAAGGTATCATGCCGCCGAAAAACAAGATCTGCTACATGTGCGGACGCGGCTTCACGACAAACAAGATCCTGGCGAATCATCTTCGGACCCACACCGGCGAGCGGCCTTTCGCCTGTGCTCATTGCAAGGCCCGATTTGCGCAATCTGCCGCGCTGGCTTCCCACGTACGAACAGTACACTGCCGGTAG
Protein Sequence: MANEIEVNVETIKNFSEQCRTCLSIGRKMVPSGEFADIFRSITSECKCMPSKRSEELLLCWECHSLLRKVKRFQNQVQRANKHFILGQSLLYSLSNLTTVIMKSNEPNQIYIFDQKLEMDEETNCISTNKDQSDFESIGSTCNFKNIQNKKDIDVNLLKKEKSTNDKKKISKWAEKRAMLNKKPKFKIIDRKSSLSKIFSNNKLFEKDVFNNIKNQIVHTNIEPLKCTECGIGFKKRKLLEVHTTKCHGEVESYICDVCHKNLPNKKQLSAHINNDCCVYKCRICDELCYGKNQRWRHLKKHKVLQCLKCELLFGTRQDFFKHYKQWHEKFICDYCGISFKMRYCIEDHIKKQHTPFECKSCSKRFARYNGLWLHNKIHHGGPSSPAYCVECDRKYPDSYRYKWHLANSTKHKPRQKLRIPCPECSKVFSKNIYMKDHYNLVHLKNFKYRCEECNKNFIRNADLTKHTRRIHEGIMPPKNKICYMCGRGFTTNKILANHLRTHTGERPFACAHCKARFAQSAALASHVRTVHCR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -