Bhed024028.1
Basic Information
- Insect
- Byasa hedistus
- Gene Symbol
- -
- Assembly
- GCA_029286795.1
- Location
- JAGSMW010000039.1:831331-837924[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 43 1 1.1e+02 4.4 2.1 1 20 78 97 78 98 0.96 2 43 2.5 2.6e+02 3.1 1.8 3 23 128 148 127 148 0.91 3 43 0.017 1.8 9.9 0.2 2 23 171 192 170 192 0.97 4 43 0.0035 0.38 12.1 0.1 1 23 196 218 196 218 0.96 5 43 0.056 6 8.3 1.4 1 21 223 243 223 246 0.74 6 43 0.01 1.1 10.7 1.1 1 23 252 275 252 275 0.95 7 43 0.0068 0.72 11.2 0.3 1 23 282 305 282 305 0.95 8 43 0.0041 0.44 11.9 2.8 1 23 312 334 312 334 0.94 9 43 8.7e-06 0.00092 20.3 2.9 1 23 340 362 340 362 0.98 10 43 0.0029 0.3 12.4 0.2 2 23 366 388 365 388 0.95 11 43 0.039 4.1 8.8 0.1 1 23 476 499 476 499 0.91 12 43 0.075 7.9 7.9 2.2 1 23 570 592 570 592 0.98 13 43 0.00022 0.023 15.9 0.5 1 23 596 618 596 618 0.97 14 43 0.012 1.3 10.4 0.8 1 23 652 675 652 675 0.91 15 43 0.034 3.6 9.0 1.8 1 23 682 705 682 705 0.95 16 43 1.4 1.5e+02 3.9 0.1 1 14 712 725 712 729 0.86 17 43 0.065 6.8 8.1 0.1 1 23 772 794 772 794 0.90 18 43 0.0001 0.011 16.9 0.5 2 23 820 842 819 842 0.93 19 43 0.4 43 5.6 0.4 1 23 864 886 864 886 0.97 20 43 0.018 1.9 9.9 4.1 1 21 890 910 890 912 0.94 21 43 3.4 3.6e+02 2.7 0.1 3 23 919 940 917 940 0.94 22 43 0.067 7.1 8.1 3.0 1 23 946 969 946 969 0.96 23 43 0.69 73 4.9 0.1 1 23 975 998 975 998 0.95 24 43 0.098 10 7.5 0.1 1 23 1100 1122 1100 1122 0.95 25 43 0.024 2.6 9.5 0.5 2 23 1146 1168 1145 1168 0.96 26 43 0.056 6 8.3 4.7 1 23 1190 1212 1190 1212 0.97 27 43 1.1e-05 0.0012 19.9 2.0 2 23 1217 1238 1217 1238 0.97 28 43 1.2 1.3e+02 4.1 4.4 1 21 1245 1265 1245 1268 0.95 29 43 0.027 2.9 9.3 2.3 1 23 1274 1297 1274 1297 0.97 30 43 0.018 1.9 9.9 3.0 1 23 1303 1326 1303 1326 0.97 31 43 5e-05 0.0053 17.9 0.9 1 23 1332 1354 1332 1354 0.98 32 43 0.0034 0.36 12.1 2.9 1 23 1360 1382 1360 1382 0.98 33 43 0.23 25 6.4 0.2 1 18 1388 1405 1388 1405 0.92 34 43 5.2 5.5e+02 2.1 1.4 1 23 1466 1489 1466 1489 0.93 35 43 0.0039 0.42 11.9 0.4 2 23 1512 1533 1511 1533 0.97 36 43 0.019 2 9.8 2.7 1 23 1555 1577 1555 1577 0.97 37 43 0.00026 0.028 15.7 0.6 1 23 1581 1603 1581 1603 0.98 38 43 0.27 28 6.2 0.1 1 23 1608 1631 1608 1631 0.95 39 43 0.00027 0.029 15.6 2.5 1 23 1637 1660 1637 1660 0.98 40 43 0.011 1.2 10.5 1.0 1 23 1667 1690 1667 1690 0.96 41 43 0.036 3.8 8.9 3.1 1 23 1696 1718 1696 1718 0.93 42 43 2e-06 0.00021 22.3 1.0 1 23 1724 1746 1724 1746 0.99 43 43 5.2e-06 0.00055 21.0 1.0 1 23 1752 1775 1752 1775 0.97
Sequence Information
- Coding Sequence
- ATGCATGAAGCTCACTcaaaactctttttatttttaggattTCAAGGACAAAGTGGAAACGAAACTGTCGTTAAAGTAGAAAGACATGATGATTTAAGATTAAACGGTGTGAAGGAAAAGCGACGGTATGTCAGGAGCGCCCGCGCCGAGGCTAGGATCCTTACAAAGAGAAACGCCAATACCCTCCTGGAGTGTTGGTCCATATGCCCGTTCAGATGGCAGAGGAACCGTTTCAAATGCGCATACTGCGAGGACAGCTTTTTGCATTGCAGCGATCTGAGACGGCACGTCGCCGATTGCTCCTCTGAGCACAGCGTTAAGGATATCTACAGCAAGTTTAAAGAGATGTCTCTCATCAACGTCGACGTGACCGACGCCTCCTGCCGTCTATGCAAATGCCCTTACTCCAACATTAGCCAAATGCGCCAGCACGCCGTCCAACACGGATACCACTTCGATTCGTCTCAACCGGACGGTGTATTGCCTTTTAGCCTTGATAAGGAATGCTGGCGCTGCGTTATATGCCGCGAGGTGTTCAACAACTTCCTCAAACTCTACGAGCATATGAACGTACACTACCAACACTACATCTGCCCGACCTGCGGCAAGGGCTACATGACCGCGCCCCGTCTGAGGAAACATTCTGAGGTGCACATAACAGGCTCGTTTCCCTGCGACAAATGCGGGCGAGTCTTCACTATGCGCGCGGCCCGCGACCATCACAaggcgcacgcgcacgcgaaGGGCCCAAGGTACGAATGCCCGCATTGCAACATGCGTTTCAACGGTTACTACGACAGGATGAACCACCTGAACGAGGCTCATAGGGAGAAGGAGGTCTCTTACCGGTGCACCGTCTGCGAACTGTCGTTTAAGACGAGCGGTAAGCGCGCGATGCACGTGCGCGCCGTCCACCTGCCGCAGCCGCGTAACTTCGCGTGCACGTGCTGCGACTGGCTGTTCAAGACCAGTTACGAGCTGAAGAGGCACATGGTTAAGCACACCGGCGAAAGGAACTTCTGTTGTACTGTATGCGGAAAATCTTACCCGAGGAGCCGCGCTCTGAGGACCCACTTGAAAACCCACGAGGAGCTCACTTGCAAGTGGTGCGGCGAGCTGTTCAAGCAGCGTGCGCAGATGATCTCCCACGTGCGGGCCAATCATCCGGATTTAAACGATTTGATTGCCGTCGAAACAGAAAAGCTCTCGTGTTCCGCTAAAGCGGAAGCGGAGGGAAATGTAGTTAAGCGAGTTAGGAAGTTAAAGGAAAACGTGAGCGCGCGTCAAATGCGAAGACGCAGGCGCGCGAACAACGAGCTGCCGGAGGAATCGGAGAGGCGGATCTCCAAAACTATGATGAGGAGGAACGCCCTGACCATTCTGGAGTGTTCCACCGCGTGGGCTTTCCGCTGGTTTCACAGCGCGTTTTTCTGCTCCTATTGTGACGTAAAGTTCGTTGACACTGCACCCCTGCGGGAACATGTGCTCGCATCCCACATCTCGAATAATCCCACTGCACGCGTATTCTCAAAATTAACCGAGAACAACATGCTTAAAATCGACATCACCAATTTAAGTTGTAGGCTCTGCAGCTTTAATTGCAGCACCATAGACATACTTAAAGATCATTTGATAGTAtcacataaaaagaaaatctggAACGAGCACAGCGATGGTGTTCTACCGTTCAAACTTGATCAGAACGGATTCTACTGTCAAATATGTTACGATTATTTTACCAGTTTTTCTAGATTAAACGAACATATGAATTCgcattatcaaaattatatatgtgaCGCTTGTGGCAAGGCTTTCGTTTCGAAATCTAGATTTAGAACTCATGTACAGTCGCACGAGACCGGTAATTTCTCTTGCGGGGAATGCGACGAGGTTCTACATACGCGGGCTGCCCGTATGTGTCATAGGTTGAAGGTGCACAAGAAGGGTGTTCGGTACACATGTCCGCGGTGCTCCGAAGTTTTCACAACTTACTACACAAGGGCAAAGCATTTGGTGGAAAGGCATGCGCAGCAGAAAAGGGATTATGAGTGCACCGCGTGCGGGAAAGCTTTTGAGACGAGCTGCAAGCGAGCAACGCACTATCGCGCAACCCACAAACCTATCGAGAAACGATACGAGTGCCAGTACTGCTCTTGGTACTTTGTCAggaCCGATGAAATCAATGCAACTGAACCAAAGGAAAAGGTTAAAGTAAAATGGAACAGGAAACGTAAGCTAGCTGAGGATAAATCCAATGCAGCAATCATCTTACAATGTTCAAACGCAGTCACATTCAGATGGAAACGCGGGAGGTTCATGTGCGGTTACTGTCCTCGTGTTTTCCCCAGTATCACCGACATCCGTCTTCACACTGTCGAGCATAAAGATAAGCTCGCTGTTTTCGAAAATTCTAAAGTGCGAAATTCTTTCCCGTTACGAGTAGACATTGCTGATCTGACTTGTAATTATTGCGGACAAAAATTTGACAATTtggataattttaaagttcatCTGTCGGAAGAGCATGACAAGTGTTTCCACTTAAATCATGGTAATGGTCTGTTGCCGTTTGTGCTGTCTGATGGAGAGTTCAGATGCGTCAACTGCAAAAATCAGTACGAAAGTTTTATGGGTCTGTTGGCTCACATGAACGAACATTATGCGACTTTTATCTGTTACATATGCGGCAAGGGTTATTCAGGGAAACATAAACTGCAATCGCACCTAAAGTGCCACGAATCTGGCAAATTCGGGTGCCCTAAGTGTGACAGTGTGTTGCCGAGTAGAACTGCCAAGAGTAGACATCTGTCCGTGGCTCACGGACCTAGAGAACGCTACCGATGTCCACTGTGCGAGGAGCACTTCATCTCTTACCATTCTCGATTACGGCATCTGGATAAGGTACACGGAAGAAAATCCGAGTATAGGTGCAGTGTGTGTTCTTCTGTATTCGCTAGTGGTGCTTTAAGGAATTATCACGTGAGGATTGTGCATAAAGttaagaagaaaattaagtggactgacgatctggtgaaggtcgcgggaaaaaCGCAGGATGTGATCAGCGCAGGATCGTTTGGAGAGGAGATCTTTGAGGGAAGCCTTTGTTTAGCAGTGGGTGTCTATCTGCTGATGATTGATTGTAAGAACCACTGGAGGCAGATCATCCGCTCTCAATggTGCCGGGATAAAAATGTTAGATGGAAACCGAAACGGAAGTTTAACGATCACAGAGATAACGCCAGTATTATTATCGAGTTTTCAAACATTTGCCCGTTTAGATGGAAAAGGGGTGAATTCGCATGTGCCTATTGTCCGATAACATTCGGAGATTTCACCGATGTCAGGCAGCACACGGCGAACCACACCCACAGGTTGGAGGCACTGCGCCACGTGCGTCCAGTAAACTGGATCAAAGCCGACATCACAAATTTGCAATGCGCCCTCTGTTTTGAAAGCACGAAAGATCTAGACGAACTCGTCAATCACTTGTGCACCGGCCACAACAAACCAATCGATAAACAATACGGTTTAGGTATCACCCCATTCTTTCTGAACAGCAAAGAGTTCATTTGCTACCATTGCAATAAGCATTACGACTTATTCACGAATCTCAACATTCACATCAATCAGCATTACAGGAATAACGTGTGCTTCAAATGTGGAAAAACTTTTTCCTCCTCCCATCGGCTAGAGGCCCACATGATCACCCACGAGGGAGCCGATGATTTGTTCAGATGCACAAAGTGCAGCGATACCTTCGCCACTCGCAAGCTCATGAGCAGCCACATGAACTGCAAGCATGGTACACCGTTTAGATACAAGTGCCCTTACTGCCAAGATAAGTTTAAAACATACGGCGACAGATCGAAGCATCTCAAGCAAGACCACGGTAGAAATGTCGAATATCCTTGTCATCTGTGCACTGCTGTTTTCGCTCAATGTAATCAAAGGACGAAACACATTCAGCGTgtccattttaaatttgaacctTATAAATGCCAGTATTGCGATTACAAATCGTCAACGTCGTCCGAGTTGCAGAATCATGCGCTGATACACGCGTCCTCGAAGCAGTTCAAGTGCGACGCGTGCGACAAAGTCTACAATAGGATAACAACATACCGCCAGCACATACACACGCACAATGTAGACAAAAGGTTCGCCTGCGAATTCTGCAACAGGGAATTTGTAAACAAGATCAGTTTGGAAAgGAGAAAAGCTGAAGAGATACAGGTTAAGAGCGAAGTGGAATCTGACAGAGAGAATGTCAGCGCGGCCGTCATGGGGTCTGCTCGTGAAGCTGGCAAGGAGAGACGCGCCGTCTTCCGGAACAACATTAAAACCATAATGGAATCCTGCACCGCGTACCCGTTCAAGTATAGGACGGGCACCTATCTGTGTTTCTTCTGCAAACAATCGTTCCTGGAACCGGAACGTCTGCGCGAGCACACCCGGCAGCAGCACTCGGACGTGAAGCATGTTCTAAAGCCGCGGAAGTACGAACCGCTGAAGATAGACTTTGGGGTCACAACGTGCAAATTATGCGGCGCGTCCATCAAAGATTACGAAACGCTCAAATCGCACCTGCGCGAACACGGGAAGACGCTCGACTGCTCGCACGGAGACAGCGTGCTGCCTTACAACCTGACCAGGGACAACCACCGCTGCCAGATATGCGGCAAGCGTTACGAGGTGTTCCTCAGCCTGCACATACACATGAACGATCACTACGAACACTTCATCTGCGAGACGTGCGGGAAACGTTTCGCTACCTCCCAGCGGATGGTGAACCACGCGCGGACCCACGAGCGAGGGAGCTTCCCGTGCAAACGGTGCCTGGACACTTTCCCTTCGTACGCGTCGCTGAACGCCCACGTCGCCAGGGTCCACAGATCCAACAAGAGGTACAAGTGTCCGATATGCAACGAGAAGTTCGCCTCGTACAAGCACAGGCTGAAGCACCTTAACACGGTGCACGGCGAGAAGACGGCGCTTTTCCCCTGCCCGTCGTGCCCGCGCGTCTTCGACCTGTGCAGCCAGAGGACCGCGCACATACGCTTCCAGCATCTGCAGGAGCGGAACCACTCGTGCCCGCTGTGCTTCATGAAGTTCTTCACAAAGTACGAGCTGAGGGTGCACTCTGTGAAGCATGGCGGTGAGAGGATATACCAGTGCGACGTTTGCAAGAAGTCCTACGCGAGGCTGAAGACGCTGCGGGAGCACATGAGGATCCATAACAACGACAGAAGATTCGTTTGTCCAGTATGTGGGCAGTCGTTCATACAGAACTGTAGTTTGAAGCAGCACGTCAGGGTATACCATCCTAATCAGGAGAAGACTGACGTCTGA
- Protein Sequence
- MHEAHSKLFLFLGFQGQSGNETVVKVERHDDLRLNGVKEKRRYVRSARAEARILTKRNANTLLECWSICPFRWQRNRFKCAYCEDSFLHCSDLRRHVADCSSEHSVKDIYSKFKEMSLINVDVTDASCRLCKCPYSNISQMRQHAVQHGYHFDSSQPDGVLPFSLDKECWRCVICREVFNNFLKLYEHMNVHYQHYICPTCGKGYMTAPRLRKHSEVHITGSFPCDKCGRVFTMRAARDHHKAHAHAKGPRYECPHCNMRFNGYYDRMNHLNEAHREKEVSYRCTVCELSFKTSGKRAMHVRAVHLPQPRNFACTCCDWLFKTSYELKRHMVKHTGERNFCCTVCGKSYPRSRALRTHLKTHEELTCKWCGELFKQRAQMISHVRANHPDLNDLIAVETEKLSCSAKAEAEGNVVKRVRKLKENVSARQMRRRRRANNELPEESERRISKTMMRRNALTILECSTAWAFRWFHSAFFCSYCDVKFVDTAPLREHVLASHISNNPTARVFSKLTENNMLKIDITNLSCRLCSFNCSTIDILKDHLIVSHKKKIWNEHSDGVLPFKLDQNGFYCQICYDYFTSFSRLNEHMNSHYQNYICDACGKAFVSKSRFRTHVQSHETGNFSCGECDEVLHTRAARMCHRLKVHKKGVRYTCPRCSEVFTTYYTRAKHLVERHAQQKRDYECTACGKAFETSCKRATHYRATHKPIEKRYECQYCSWYFVRTDEINATEPKEKVKVKWNRKRKLAEDKSNAAIILQCSNAVTFRWKRGRFMCGYCPRVFPSITDIRLHTVEHKDKLAVFENSKVRNSFPLRVDIADLTCNYCGQKFDNLDNFKVHLSEEHDKCFHLNHGNGLLPFVLSDGEFRCVNCKNQYESFMGLLAHMNEHYATFICYICGKGYSGKHKLQSHLKCHESGKFGCPKCDSVLPSRTAKSRHLSVAHGPRERYRCPLCEEHFISYHSRLRHLDKVHGRKSEYRCSVCSSVFASGALRNYHVRIVHKVKKKIKWTDDLVKVAGKTQDVISAGSFGEEIFEGSLCLAVGVYLLMIDCKNHWRQIIRSQWCRDKNVRWKPKRKFNDHRDNASIIIEFSNICPFRWKRGEFACAYCPITFGDFTDVRQHTANHTHRLEALRHVRPVNWIKADITNLQCALCFESTKDLDELVNHLCTGHNKPIDKQYGLGITPFFLNSKEFICYHCNKHYDLFTNLNIHINQHYRNNVCFKCGKTFSSSHRLEAHMITHEGADDLFRCTKCSDTFATRKLMSSHMNCKHGTPFRYKCPYCQDKFKTYGDRSKHLKQDHGRNVEYPCHLCTAVFAQCNQRTKHIQRVHFKFEPYKCQYCDYKSSTSSELQNHALIHASSKQFKCDACDKVYNRITTYRQHIHTHNVDKRFACEFCNREFVNKISLERRKAEEIQVKSEVESDRENVSAAVMGSAREAGKERRAVFRNNIKTIMESCTAYPFKYRTGTYLCFFCKQSFLEPERLREHTRQQHSDVKHVLKPRKYEPLKIDFGVTTCKLCGASIKDYETLKSHLREHGKTLDCSHGDSVLPYNLTRDNHRCQICGKRYEVFLSLHIHMNDHYEHFICETCGKRFATSQRMVNHARTHERGSFPCKRCLDTFPSYASLNAHVARVHRSNKRYKCPICNEKFASYKHRLKHLNTVHGEKTALFPCPSCPRVFDLCSQRTAHIRFQHLQERNHSCPLCFMKFFTKYELRVHSVKHGGERIYQCDVCKKSYARLKTLREHMRIHNNDRRFVCPVCGQSFIQNCSLKQHVRVYHPNQEKTDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -