Basic Information

Insect: Bruchidius siliquastri
Gene Symbol: -
Assembly: GCA_949316355.1
Location: OX438535.1:2317981-2341393[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 9.6 7.2e+02 1.2 1.2 1 22 10 31 10 31 0.91

2 16 0.34 25 5.7 0.3 3 23 385 407 383 407 0.91

3 16 0.13 9.5 7.1 2.5 1 22 510 531 510 534 0.90

4 16 7.5 5.6e+02 1.5 3.7 3 19 590 606 589 612 0.88

5 16 0.017 1.2 9.9 0.2 3 23 627 648 626 648 0.95

6 16 1.8 1.3e+02 3.5 0.9 1 23 653 677 653 677 0.90

7 16 0.0004 0.03 14.9 0.3 2 23 692 714 692 714 0.96

8 16 0.0052 0.39 11.4 0.0 2 22 720 740 719 740 0.95

9 16 7.7 5.7e+02 1.5 0.4 1 16 753 768 753 772 0.89

10 16 0.0014 0.11 13.2 0.5 1 23 794 815 794 815 0.89

11 16 1.5e-05 0.0011 19.5 1.7 1 23 821 843 821 843 0.97

12 16 0.049 3.7 8.4 2.2 1 23 856 878 856 878 0.95

13 16 0.31 23 5.9 0.1 1 23 883 907 883 907 0.98

14 16 0.00062 0.046 14.4 4.3 1 23 913 935 913 935 0.99

15 16 9.6e-05 0.0071 16.9 2.8 1 23 940 962 940 962 0.98

16 16 2.9e-05 0.0022 18.5 2.2 1 21 968 988 968 993 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	9.6	7.2e+02	1.2	1.2	1	22	10	31	10	31	0.91
2	16	0.34	25	5.7	0.3	3	23	385	407	383	407	0.91
3	16	0.13	9.5	7.1	2.5	1	22	510	531	510	534	0.90
4	16	7.5	5.6e+02	1.5	3.7	3	19	590	606	589	612	0.88
5	16	0.017	1.2	9.9	0.2	3	23	627	648	626	648	0.95
6	16	1.8	1.3e+02	3.5	0.9	1	23	653	677	653	677	0.90
7	16	0.0004	0.03	14.9	0.3	2	23	692	714	692	714	0.96
8	16	0.0052	0.39	11.4	0.0	2	22	720	740	719	740	0.95
9	16	7.7	5.7e+02	1.5	0.4	1	16	753	768	753	772	0.89
10	16	0.0014	0.11	13.2	0.5	1	23	794	815	794	815	0.89
11	16	1.5e-05	0.0011	19.5	1.7	1	23	821	843	821	843	0.97
12	16	0.049	3.7	8.4	2.2	1	23	856	878	856	878	0.95
13	16	0.31	23	5.9	0.1	1	23	883	907	883	907	0.98
14	16	0.00062	0.046	14.4	4.3	1	23	913	935	913	935	0.99
15	16	9.6e-05	0.0071	16.9	2.8	1	23	940	962	940	962	0.98
16	16	2.9e-05	0.0022	18.5	2.2	1	21	968	988	968	993	0.94

Sequence Information

Coding Sequence: ATGATTACTGAATACGAAGACGATGCCCATTTTTGCCTAAAATGTCACACGACAATCATaggtctggacaattatgtcgACCACAGAAAAACAGGCTGCTCCAGGAACCCAAAGTCGCCCCTACCAAGTCAACTCCTGCCTCCAGATGAGTCTTTTGGACCCAAGGCTGATGATTTCTTCTCTTCATTAGAACTAAGGAGCAGCTCCAAGAAGAATGAAGGTCATCCTTCCACTTCTGGAAAGAGCATTAGTGGGATTTTAACCAGAAGTAAGACAACTGCAGTTATACAGGCTACATCTAGCTCCACAAAAGAACCGGACCCTCCTCAGTCCAAATCAGGTAAAAATGTTTGGATAGGAGGCCACCAACTCAAAGAGCTTGGTCATGGAGATAACCAATCGAAGTTAATTAAAGCAGTTGCGAACCTCGAACGACGGAAAGAAGAGCCAACTAGATTACAAGTGTACGACGAATCAGAAGATGAATCTGACGAATATGACTTTGAAGTCGAAGAATCAAGTAGTGATGACCAAGATCGACCTCCTAGGAACTACACTGGTGGCAAATGGAAGCCCTCTTCGCCCATACACTGGTCTAGGAATGATTGGAACGTACCCCCTCCATCATACACTGGAGGAAAGTGGAAACCTCCCCCCACTCACACAAAAGGTAAGTGGAAGCCTTCCTATGGGAAGGAAGATGACATTCCTCCGTCTAAGAAGCAAGATGAATGCCTGGATATACCTCCACCTACATTCACTGGAAGTAAGTGGGTTTCCTCGAAAAGACAAGAATATCAAGATATCCCACCTCCAAACCATACCAAAGGCAAGTGGAAGCCAAGATGCGAAGATGATGATTATCCTCCACCAAATCATACGAAAGGAAAGTGGAAGCCTGAGTTTCCTCCACCCTCCCACACTAAGGGAAAGTGGAAACCTGCGGATTTTCCACCACCATCGCATACTAAAgGTAAATGGAAGCCCAAGGATGATATAGAACTATCCATGTCCATAGAAACAGAAAAACCTCAAGATGTGGTGAAGGAGCCGAAGCCAGAAGATGACCATTGGATAACTCCATCCACTAGTAAAGACATAAGCATCATGGACCAATCACCAAAAAAATCTAACGATGCTAATCAGTACTGGTGTGGTCTTTGCAACAGAAAGCTTTCATCCAAGGTTGTATACGAGCGACATTTGAAATCGGAGCTGCACTTCAAACGTATGGTCCATGACTTGGACTTTGATGACAACAGCATCCTAACCAGTAAGAGACGCACGAGGATAGCACCTCCTGAAGTGATATTCAGCAACCAGAAAAAAACAACGCCTAAGGGTGAAAGAAAACGAGCTAGgaagaaaatatatgaaagatGTGAAGTCTGCCATTCGAAGGTCTACGCCCATCTAATCGGGAAGCACCTCGTGTCCTACTATCACTGTAGAAGGGGGGATATCAGCTCAGCGACAGCAAAGTGCATGGTCTTGAAAAACATCCATGAGGTTGTTTTAGAGAGTCCCTTCCAATGTAGTATTTGCAAGTTTTATTGCAACACTCAAGAAGACTTCTTGACGCATTGGCTCTCGCAAGGTCATATTGACAACAAGAAACCAGGTTATTTCCACTGTAGTTTTTGCAGCCACAGATGTGAGGACACCAAGCAAATGTATGAACACCTGGTCTCACCTGGTCATTTAGAAGTGGTTTCTGTTATAAACAGGTACATCCCCatagtgattaaaaaaataaacccaGTATTTTGTTCCACTTGCAATAAGGAGTTCCGTCTGAACATTCAGATGTTACAGCATTGCAAAAAATTCAATCACGGTCAAGAAGAAGAACTAAATAAACTCCGAGCTGTGAATTTATGCGATGAATGTGGTGAAAATTTTTTATCCAGCGTTTCATTGCAGAGACACAAGGAGTCGGTTCATGGTGAAAAGTATTATTTCTGCACACCCTGTAACATAAAACTAAAGAGCAAAAAGGAAATAAGAGCCCATCGAAATACTCAGGAACATCTGTATAATTACATGGAGAAGAAAGGTAAGGCTAAACAGAGAGAATGTGAATACTGCAATGAAtcttttggaaattatttattactgAAGAAACACTTGAGGGAGGTGCATCCTGAATACCAAATAAGATGTGGCTTGTGTGGCACCATCTTCGCTGTGGCAGCCGAGTTGGCTGCCCATATACGTCGGAAGGCATGCAAGTTTCCCACTAATGatgaagatatttttcaatGCGAACGTTGTCCCTTCAAAGCCAGTTCCAAAGCGGACCTCTATTTTCACGGTGTATTCCATGACGCAGAACCGATAACGTTTGCAGTGGGAGACGGTGAGAAGGTTGTGTCCAAATACAAATGTCCTTTGTGCTCCAAAATGTTCACCAAGGCTTCTTTGCTTCCGCACATCAGGCAGCATACGAAGGAGAGGCCGTTTGAATGTAAGATCTGCGGGAAGAAGTTCGctaggaaaaataatttgaatttccaTGTCAGAAATCATAAAAACGATTACAAAAGAAAAAGCAAAGAACAGACATTTTTATGCTCTGTATGTGGCGATAGCTTCAACAGAAGATGCATTCTCCAACAACACATGCTCCGTCATACCGGCAAGCCGTTCAAGTGTCCGTCAGTGGGCTGTCTTTACTCCGCTCGTTCAAGCGCGGAAGTGAAAGCCCATTTCTCCACTCACCTTGAcgagaaaaatttcaaatgtgaCCTATGCAAATTTACTACCAAGACCAAGCAACTTCTTCAAAGACATTCCAGGACGCACTCTGAGAGAAAGCATCAATGTCCTAAGTGCAGTTTTGCGGCAATAACAGCTTCGCATCTAAGGAGGCATATCAGGAAGCATACTGGGGCTAAGCCCTTCAAATGTCCTTATTGCGAATATAGCTGTAGCACATTGGAAAACCTGAGGAAGCACATCCTCATAACTTCCAAACACGTAGGCAAAAGCGTGTATGAATGCAAACTCTGCACTAGCAAGGATCAAGAGAAGTTCCAGTCGAACGTGGCTAAGGAGTTTAGGGCTCACCTCCTGACCAGGCACTCAGACATGTTCGCTAACAGCGTCGAGGTGATCAGTTATGTGGCTGGACTGTACAATCTCCACGATGACGTATCTTTGTTGAATGAAGATTTAGATACTCATGCAAGCAATTCAAAATCACCGCCAGCAACAATGGAGGAACAACACGATCACATTCTGAAGCTAAACAGCGACATCGATCCAGTAGTGAGTCAGCTTCCAACCACCTCCTCGAACAAGGACAACTTCGACCAAATGTTCACTATGTTCATCATTCCTAAGGAAGACGGGATCTCTGTAGAGACTCCTGGGGAGTCTTGGAACTTGGTTGGGAGATATGATGTCGAGGAAGAATCCGGAACCTTGATTCCTTTCCAAAGTGAAGAGGACAGTCTTTTTGACGAACATTTTTGA
Protein Sequence: MITEYEDDAHFCLKCHTTIIGLDNYVDHRKTGCSRNPKSPLPSQLLPPDESFGPKADDFFSSLELRSSSKKNEGHPSTSGKSISGILTRSKTTAVIQATSSSTKEPDPPQSKSGKNVWIGGHQLKELGHGDNQSKLIKAVANLERRKEEPTRLQVYDESEDESDEYDFEVEESSSDDQDRPPRNYTGGKWKPSSPIHWSRNDWNVPPPSYTGGKWKPPPTHTKGKWKPSYGKEDDIPPSKKQDECLDIPPPTFTGSKWVSSKRQEYQDIPPPNHTKGKWKPRCEDDDYPPPNHTKGKWKPEFPPPSHTKGKWKPADFPPPSHTKGKWKPKDDIELSMSIETEKPQDVVKEPKPEDDHWITPSTSKDISIMDQSPKKSNDANQYWCGLCNRKLSSKVVYERHLKSELHFKRMVHDLDFDDNSILTSKRRTRIAPPEVIFSNQKKTTPKGERKRARKKIYERCEVCHSKVYAHLIGKHLVSYYHCRRGDISSATAKCMVLKNIHEVVLESPFQCSICKFYCNTQEDFLTHWLSQGHIDNKKPGYFHCSFCSHRCEDTKQMYEHLVSPGHLEVVSVINRYIPIVIKKINPVFCSTCNKEFRLNIQMLQHCKKFNHGQEEELNKLRAVNLCDECGENFLSSVSLQRHKESVHGEKYYFCTPCNIKLKSKKEIRAHRNTQEHLYNYMEKKGKAKQRECEYCNESFGNYLLLKKHLREVHPEYQIRCGLCGTIFAVAAELAAHIRRKACKFPTNDEDIFQCERCPFKASSKADLYFHGVFHDAEPITFAVGDGEKVVSKYKCPLCSKMFTKASLLPHIRQHTKERPFECKICGKKFARKNNLNFHVRNHKNDYKRKSKEQTFLCSVCGDSFNRRCILQQHMLRHTGKPFKCPSVGCLYSARSSAEVKAHFSTHLDEKNFKCDLCKFTTKTKQLLQRHSRTHSERKHQCPKCSFAAITASHLRRHIRKHTGAKPFKCPYCEYSCSTLENLRKHILITSKHVGKSVYECKLCTSKDQEKFQSNVAKEFRAHLLTRHSDMFANSVEVISYVAGLYNLHDDVSLLNEDLDTHASNSKSPPATMEEQHDHILKLNSDIDPVVSQLPTTSSNKDNFDQMFTMFIIPKEDGISVETPGESWNLVGRYDVEEESGTLIPFQSEEDSLFDEHF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -