Bsil011034.1
Basic Information
- Insect
- Bruchidius siliquastri
- Gene Symbol
- ACP3
- Assembly
- GCA_949316355.1
- Location
- OX438534.1:6445028-6486350[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.0018 0.14 12.9 1.3 2 23 863 885 863 885 0.93 2 20 0.073 5.5 7.8 0.9 1 19 1069 1087 1069 1089 0.97 3 20 0.14 10 7.0 3.6 1 23 1119 1142 1119 1142 0.92 4 20 0.21 16 6.4 0.2 1 23 1175 1198 1175 1198 0.93 5 20 0.00029 0.021 15.4 2.2 3 23 1287 1307 1286 1307 0.98 6 20 0.11 8.5 7.2 0.1 1 23 1321 1343 1321 1343 0.88 7 20 0.0031 0.23 12.2 0.4 3 23 1348 1368 1346 1368 0.96 8 20 0.0029 0.22 12.2 3.6 3 23 1397 1417 1396 1417 0.98 9 20 0.12 9 7.1 1.7 2 23 1441 1463 1440 1463 0.94 10 20 3.4 2.6e+02 2.6 0.2 2 23 1478 1499 1477 1499 0.85 11 20 4.2e-07 3.2e-05 24.3 3.0 1 23 1531 1553 1531 1553 0.98 12 20 0.0059 0.44 11.3 0.1 1 23 1557 1580 1557 1580 0.96 13 20 0.0029 0.22 12.2 0.2 1 23 1607 1629 1607 1629 0.98 14 20 0.0022 0.16 12.6 1.2 3 23 1643 1664 1641 1664 0.94 15 20 0.00076 0.057 14.1 0.8 1 23 1684 1706 1684 1706 0.95 16 20 0.019 1.4 9.7 0.4 1 23 1742 1765 1742 1765 0.95 17 20 0.0058 0.43 11.3 1.6 2 23 1776 1797 1776 1797 0.94 18 20 3.2e-05 0.0024 18.4 1.2 1 23 1826 1848 1826 1849 0.95 19 20 1.9e-05 0.0015 19.1 1.8 1 23 1857 1879 1857 1879 0.99 20 20 0.0024 0.18 12.5 0.1 1 23 1893 1916 1893 1916 0.94
Sequence Information
- Coding Sequence
- ATGTGCAAGTTCATAGCGATATTAGTTGTATTAGCTGCATCCAGTATTTCTGTGGAATCTGATGGTGAATCCAACCTGTTGTCTTTTGTTCAAgaagGCAAGCTACAGTTGATCGAACTAGGCCAATATATTCGTAAGAGATACGCTGACTTCATACCGAAAAACTACAACACAGAATTCTTTAAGATGACGAGTGTCTCTTCCCAGAGAAATATTGACTCAGCGGGGAAATACTTGGAAGGCCTTTATCCGGAGTTTAACGATACTAAAAACGCTGTACATGTCGAAAACCTTGTTCTCAGAACGTTTTTATCTCCAAGCTACATCTTCCAGTATATGAAGCTGGTAGCAACCGATGAAGATATTAGAGGCACCATCAACAAGCATAAACAGCTTTTTATTTACCTACATGAAAAGGCAAGTTTCAGTGTACCGATTCCAGAGAGATTATTTTATGCGTATCTCCTATATGATGATTTGAGTATTGAAGCTAGGAATAACCTAACGCTGCCTGATTGGACTAGATCCGTTTTTCCGGAGAGCCTTTCTTATATTTCAAAAGCTTTCTGTAAAACTATGGGCTATAACCACGAAATGCAAAAGACAGctaCCGGTCCCTTTTTGAACACGATCATCAACCATTTCGACAGAGTCCTAACCAAGTCGACAAATCAAAAGGTCCTTCTGTATAGTGCCCATGACATGAATCTGATGTGTTTGTTGAACACTTTCGGCATATATGAGCAGTTTCACTACGAAGTTCCCGACTTTGCAAGCAGCATGATTTTTGAACTGAGAGAGAAAGACGGAAAACGTTTCGTGAACGGATATTACAAACTTAACCAGGATTTGCATCCTATTACTTTCAGAGGTTGCCCGTTTGATTGTGATTACGATGCGTTTAAACAACGCCTTAGTGAGCTTTTCAGGCATGGTGCTAGAACGCCGattttattctacaaaaatgatCCTTATAAAGACAAGTCCCATTGGGCTGGTTTGGAAAAGGGACAACTCACTGAGgaagGCAAGCTACAGTTGATCGAACTAGGCCAATATATTCGCAAGAGATACGCTGACTTCATACCGAAAAACTACAACACAGAATTCTTTAAGATGACTAGTGTCACTTCCCAGAGAAATATTGACTCTGCAGGGAAATACTTGGAAGGCCTCTATCCGGAGTTTAACGATACTAAAAACGCTGTACACGTCGAAAACCTTGTTCTCAGAACGTTTTTATCCCCAAGCTACATCTTACAGTATACGAAGCTGGTAGCAACCGATAAAGATATTAGAAGCACCATCAACGAGCATGAACAGCTTTTCAGTTACCTACATGAAAAGGCAAGTTTCAGCGTACCGATTCCAGAGAGGTTACTTTATGCGTATCTCCTATATGATGATTTGAGTATCGAAGCCAGGAATAACCTAACGCTGCCTGATTGGACTAAATCCGTTTTTCCGGAGAGTCTTTCTAACATGTCAAAAGCTTTCTGTAAAACTATGGGCTATAACCACGAAATGCAAAAGACAGctaCCGGTCCCTTTTTGAACACGATCATCAACCATTTCGACAGAGTCCTAACCAAGTCGACAAATCAAAAGGTCCTTCTGTATAGTGCCCATGACATAAATCTGATGTGTTTGTTGAACACTTTCGGCATATATGAGAAGTTTCACTACGGAGTTCCCGACTTTGCAAGCAGCATGATTTTTGAACTGAGAGAGAAAGACGGAAAACGTTTCGTGAACGGATATTACAAACTTAACCAGGATTTGCATCCTATTACTTTCAGAGGTTGCCAGTTTGATTGTGATTACGATGCGTTTAAACAACGCCTTAGTGAGCTTAGGTCGACCCTTGAAAGCCCTCACACTCACACACAGCTCAGCGTTGTTGGCGGCCAGCGTCTTTCTAGCCTGAACATCGACCAGGCTCCGTGCCCTGGCCAAGTGGGGAGTCACGGCAGCCGCGATTCAGTGCTCTCTCAATATTCAGCCAAGCCAAGCAAGCCAGCCTTGCCTGCTGTACGCTCCTCTCTTCACAGTGTCAGTGAACGTGGGTTAGTTCAATTCATCATGGAAGAGACTAACGTGAATTTCCAATCATGCTGTAGACTGTGTCTGTGCGAGACGAATGACGCTTTCAAGAATGCAATGGAGGACAGGATTTTGCCCAGGAGGATTCTGGACTCGTTGGCGATTAAGATAAATTCCACAGATCAGATAACAACACTGGTGTGTGAACAGTGCGAGCAAATGGTGAACAAATGGTACGAATATAAGCAGAAATGTGTACAGAACCAATCTAAATTACGACGTTATCTGGTTAAGTTCCTTGTACAAGAAAAAGAAGAACTTAATACTATTGTAAATCCGAGTATTCAAATAAAAGAAGAACCTCTTGAAAATGATGAAAGCTCAACCAGTAACATTCGCATCAAGTCTGAACCAGTCGATGTCGATGATTCAATGAACGGGGAATATAATGAGTTTCCCCCACCACTTTCACCTCACATGCCTGAGCATATGGAGGCCGAATTGCAAAATGGTCATAGTGTATACGTGAATGACAATGACAGGAGGTGTAGGTACTGCGATAAAATATTCAGCAATATATCGAACAGAAAGAAGCACGAGAAGGCAATTCATCCCCCAAATGAGCCGTACGCAAGAAGATCAATGTGTGAAATATCACCGAAGAAGGTCCAGGAACCCAACGAACAAAATCATCCACCGGACACttctgaaaaacctgaagatcaGACAGAAGAGCAAAATGACCAGGAATCATCCGAACAATTGGTAGCAGAACAAAACGAGGAAGCAAGTGAAAAAGCTACAGACGAACCCAAAGAGCAAACAGAAGAACCATCCACGGAACAAACCGCAGATAACGCCGATGAATTACCAAAGGAACAAACAACTGAAACTACCGAAGAACCAATGGACTCTTCCGAACCAAAAGAAGAAGCCGACCAACAGAAGATATTATTCGCCGCAGGTTTGAAGCTTCTCGAGACTAACACCACACCGATCTCCTTCGAGACGCTGTCCAAGATAGAGCTCAGTTACGCGGAAAAGTGCAAAGCTATGGTGAAGATGCACAGAACGCTGGAATGCGCTTGCCACAACGTGAATCATCCGAACCTTAAAGGACTTCTATCCCATTTGAGGTCTCTTCGCATTTGGTTCCCAGTCTTCACTTGCTACAACTGCATGATAACGTTCACCGATCGATCCACCTTCACCAGACACAACGTGAAGTGCCCCAGCGCCTCGCTGGACACCTTGACGAAGCTGAGCAACTTGAGGAAGAGGAGCGAGGTGAAAGTAAGGCTGTACCAGAACTTCAAATGCACATCGTGCAAGTTCATGTTCAGCTTCCATGAGGATTTCATGAAGCACGTCGATGAAGACCATTGTGCCGTTGTTTTGCCTGTGCAGTGCAGTTGCGAAAGGGAGTTTGACAACCTTGAGGATTATAAGGACCACGTCTATCTCAGCTGCTTGGTGGAATTTTACTGTGATATCTGTTTCATTACCACAGACACGGTGGAGGAGTTTCAGAAGCATGCCATGGAAGCTCACGATGAGTCTGAAGGTTTCATATTAAAACAGGATGATGGATACGCAATGCGAAAGGCTATGATGCAGTCGCCTCCCAAGCCAAAGGAAACGGTGGACGAAAATGCCATTGTGACAGGCAAAAGAGAACGAAGGCCTCCAAAACCCATCGAGATATCCGCAACTACTCCTTCTACCACATCCAGAGTGCCCAAAGAAAAGGAAGAACCATACGTCAGCGTTTACAATCATCCTTACTCCATAACCCCGAGGTCGGGTACCAAGGCGTGTCCCATTTGCAACAAGGAGTATTCGAGTTACCACAACATGATGCGGCATTTCAAGACGCACAGCGAAGAAGAGATAAGGAAGTACGAGAACGACTCAGTGTACGCTTGTCCTGATTGCGAAGAGATGTTCAGGCTGCCAGAATGGAGACAGCATTTGGTGTCCAAGCATCAACCGACAGCCTGCGAAGAGTGCGGCAGGACGTTCCAGTTCAGGACAGAGCTGGATCAACATAGAAGCGTGCACTTGAATATTAAAGTGTACAGGGATTCCAAGACGCATTCCCTGAAAACGGCGATGATCAGCCCCGGATCTGAGGTGATGCTGCTCTGTGAGATCTGCGAGGAAACCTTCCACTCGAAAGAAGAGCTGAAACATCACAAGCTCACCCACTTTCAGAACCTGCAAAACGGCGGGATCAAGATAGAGCCGGCGATGGATGAAGATCAACAAAAGACATGGACCTGTACGCCCTGCGACAAGACGTACCACACCTACAGCGGTCTGTGGGACCACAACAGAAGGAAGCACACGGGAGAGGAAAAGTCCATTTCCAGTTCGGAGTATCCGAAGCAATGCAAGTACTGCGAGAAGGTGCTGCTCAGTGGTGCTGCTTATGCCAGGCACAAGATGATCCACGAGAAAGATAGAATCCCAACTGATGCAAACGCAAGGATGATGATGTACACTCACAGTAGAAAAACTGAGACTCCGCCCCGGGAAGAGCCGTACCACAGTTGCCCACAGTGCTCGAAGGTGTTTGGATCCAAGTCGAACCTGAAGAACCACATGAAGACTCATATGCAAGGCTACACTTGTGGCGTATGCAAAGAAGTCTTCGGAACGACCGAAGAGTTGTTACAGCACAACATGATGGAACATCCAGGAGATGCGATGTCTCTGTTGGAAACCGAGATAAAACAGGAACCGGATGATGATATGGAGCAACCGTATATGGTCTATACATGTGACGTATGTGTGGCGACTTTCGAAACGCGAATGGAACTGGTCAGGCATAAGGAGATGCACGCCCAAGAAATGCGACCGACAGCGAGCAAGAATATATTCTGCAAATATTGCAAGATTTCCTTCGATTCTGTGATGAACCTGGCCAAGCATATGCACTTAGAACACGGAGAATCCTCGAAACCAAAGACGATGAAGATCAAGGAGGCGAATCCGGGCCGCAGATTCAGCTGCAGCATTTGTTCTAAGGCGTTCCATACCCAAAACGCACTGTCAACTCACATTGGATGGCATCGAAGAGGAACCAATGACTCTAATACCAAAGTGTCTAAAGTCATCCAACAGGTTGCCAGAGACATTCCAAGACCAGCTCCGATACGGATTCAAAGCTCGCCAACCTTCAGATGTCACACCTGCGCCGGGGAATTTCCCAACAACACTGCGTTGCAAGTCCACATCCTAGAGAAGCACAGAAGTGCGAATAGCATCGTCTTGGTGCCCAGATGTAGTCCCTGCGACAAGGACTTCAAGTCCCAGGACGAGTACGAGAAACATAAACGATTCCACGAATTCTTGGAGAGGCAAAAACAAGCCGAACAACATACGATTCAGCAACAGGAGATTTCGGTGCACAATACGTCCGGGAAGAACTTCCCTTGCAAGTATTGCAACGCAGGGTTCAGTAGATCTGACACTTTGGGTATTCACATGAGGCAGCACCATAAGGAATACGTACCGACTGAATTCAAGTGTAACTACTGCGAAAGAGTGTTCGATAAGCAGAATTCCCTATCGATACATCTGAAGACTCACGAGAAGCAGAGGTTGGCGAACGTTCCTTCAAAGCCAGTGTTTTCCTGCTCGATATGCAATATGGGCTTCGAGATGCCCAAAGATTTGCGAGCGCATACCATAAACGCTCACCCGTTTTGA
- Protein Sequence
- MCKFIAILVVLAASSISVESDGESNLLSFVQEGKLQLIELGQYIRKRYADFIPKNYNTEFFKMTSVSSQRNIDSAGKYLEGLYPEFNDTKNAVHVENLVLRTFLSPSYIFQYMKLVATDEDIRGTINKHKQLFIYLHEKASFSVPIPERLFYAYLLYDDLSIEARNNLTLPDWTRSVFPESLSYISKAFCKTMGYNHEMQKTATGPFLNTIINHFDRVLTKSTNQKVLLYSAHDMNLMCLLNTFGIYEQFHYEVPDFASSMIFELREKDGKRFVNGYYKLNQDLHPITFRGCPFDCDYDAFKQRLSELFRHGARTPILFYKNDPYKDKSHWAGLEKGQLTEEGKLQLIELGQYIRKRYADFIPKNYNTEFFKMTSVTSQRNIDSAGKYLEGLYPEFNDTKNAVHVENLVLRTFLSPSYILQYTKLVATDKDIRSTINEHEQLFSYLHEKASFSVPIPERLLYAYLLYDDLSIEARNNLTLPDWTKSVFPESLSNMSKAFCKTMGYNHEMQKTATGPFLNTIINHFDRVLTKSTNQKVLLYSAHDINLMCLLNTFGIYEKFHYGVPDFASSMIFELREKDGKRFVNGYYKLNQDLHPITFRGCQFDCDYDAFKQRLSELRSTLESPHTHTQLSVVGGQRLSSLNIDQAPCPGQVGSHGSRDSVLSQYSAKPSKPALPAVRSSLHSVSERGLVQFIMEETNVNFQSCCRLCLCETNDAFKNAMEDRILPRRILDSLAIKINSTDQITTLVCEQCEQMVNKWYEYKQKCVQNQSKLRRYLVKFLVQEKEELNTIVNPSIQIKEEPLENDESSTSNIRIKSEPVDVDDSMNGEYNEFPPPLSPHMPEHMEAELQNGHSVYVNDNDRRCRYCDKIFSNISNRKKHEKAIHPPNEPYARRSMCEISPKKVQEPNEQNHPPDTSEKPEDQTEEQNDQESSEQLVAEQNEEASEKATDEPKEQTEEPSTEQTADNADELPKEQTTETTEEPMDSSEPKEEADQQKILFAAGLKLLETNTTPISFETLSKIELSYAEKCKAMVKMHRTLECACHNVNHPNLKGLLSHLRSLRIWFPVFTCYNCMITFTDRSTFTRHNVKCPSASLDTLTKLSNLRKRSEVKVRLYQNFKCTSCKFMFSFHEDFMKHVDEDHCAVVLPVQCSCEREFDNLEDYKDHVYLSCLVEFYCDICFITTDTVEEFQKHAMEAHDESEGFILKQDDGYAMRKAMMQSPPKPKETVDENAIVTGKRERRPPKPIEISATTPSTTSRVPKEKEEPYVSVYNHPYSITPRSGTKACPICNKEYSSYHNMMRHFKTHSEEEIRKYENDSVYACPDCEEMFRLPEWRQHLVSKHQPTACEECGRTFQFRTELDQHRSVHLNIKVYRDSKTHSLKTAMISPGSEVMLLCEICEETFHSKEELKHHKLTHFQNLQNGGIKIEPAMDEDQQKTWTCTPCDKTYHTYSGLWDHNRRKHTGEEKSISSSEYPKQCKYCEKVLLSGAAYARHKMIHEKDRIPTDANARMMMYTHSRKTETPPREEPYHSCPQCSKVFGSKSNLKNHMKTHMQGYTCGVCKEVFGTTEELLQHNMMEHPGDAMSLLETEIKQEPDDDMEQPYMVYTCDVCVATFETRMELVRHKEMHAQEMRPTASKNIFCKYCKISFDSVMNLAKHMHLEHGESSKPKTMKIKEANPGRRFSCSICSKAFHTQNALSTHIGWHRRGTNDSNTKVSKVIQQVARDIPRPAPIRIQSSPTFRCHTCAGEFPNNTALQVHILEKHRSANSIVLVPRCSPCDKDFKSQDEYEKHKRFHEFLERQKQAEQHTIQQQEISVHNTSGKNFPCKYCNAGFSRSDTLGIHMRQHHKEYVPTEFKCNYCERVFDKQNSLSIHLKTHEKQRLANVPSKPVFSCSICNMGFEMPKDLRAHTINAHPF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -