Basic Information

Insect: Bruchidius siliquastri
Gene Symbol: Znf672
Assembly: GCA_949316355.1
Location: OX438529.1:9615869-9628165[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3.1e-05 0.0023 18.5 0.7 1 23 190 212 190 212 0.95

2 15 0.00026 0.019 15.5 0.4 3 23 220 240 219 240 0.99

3 15 0.00022 0.016 15.8 0.7 1 23 337 359 337 359 0.98

4 15 0.72 54 4.7 1.9 1 23 366 389 366 389 0.86

5 15 9.3e-07 6.9e-05 23.2 3.9 1 23 414 436 414 436 0.98

6 15 0.011 0.81 10.4 0.0 1 23 449 471 449 471 0.92

7 15 0.066 5 8.0 0.1 1 23 477 500 477 500 0.93

8 15 0.093 7 7.5 1.3 2 19 508 525 508 526 0.95

9 15 1.3e-05 0.00095 19.7 4.5 1 23 535 557 535 557 0.97

10 15 0.0054 0.4 11.4 0.3 2 23 563 584 562 584 0.96

11 15 9.9e-06 0.00074 20.0 0.4 1 23 592 614 592 614 0.98

12 15 0.0043 0.32 11.7 0.2 3 23 622 642 620 642 0.97

13 15 0.00014 0.01 16.4 0.3 1 23 648 670 648 671 0.95

14 15 0.15 12 6.8 1.2 1 23 685 707 685 707 0.96

15 15 0.0015 0.11 13.2 0.1 1 20 1118 1137 1118 1140 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3.1e-05	0.0023	18.5	0.7	1	23	190	212	190	212	0.95
2	15	0.00026	0.019	15.5	0.4	3	23	220	240	219	240	0.99
3	15	0.00022	0.016	15.8	0.7	1	23	337	359	337	359	0.98
4	15	0.72	54	4.7	1.9	1	23	366	389	366	389	0.86
5	15	9.3e-07	6.9e-05	23.2	3.9	1	23	414	436	414	436	0.98
6	15	0.011	0.81	10.4	0.0	1	23	449	471	449	471	0.92
7	15	0.066	5	8.0	0.1	1	23	477	500	477	500	0.93
8	15	0.093	7	7.5	1.3	2	19	508	525	508	526	0.95
9	15	1.3e-05	0.00095	19.7	4.5	1	23	535	557	535	557	0.97
10	15	0.0054	0.4	11.4	0.3	2	23	563	584	562	584	0.96
11	15	9.9e-06	0.00074	20.0	0.4	1	23	592	614	592	614	0.98
12	15	0.0043	0.32	11.7	0.2	3	23	622	642	620	642	0.97
13	15	0.00014	0.01	16.4	0.3	1	23	648	670	648	671	0.95
14	15	0.15	12	6.8	1.2	1	23	685	707	685	707	0.96
15	15	0.0015	0.11	13.2	0.1	1	20	1118	1137	1118	1140	0.93

Sequence Information

Coding Sequence: ATGGAGGAAGACTTTGGATTAACTTGGGAGGACTCAGCAGCTGTCCAGACTGAAGAGGTTATATGTGGTATTGAGTCTGAGATCCTCCCTTCAGACGAATTCCATGGAGGTGGAGAGGTGACAGTGGAAGAAGTAGTAGAGGAAGGAGAGGTGATCCTGACTGATCATGGTCCTGAAGAGGGTGAGGTAATAGAAGAAGTGGATCAGAAGGTGATCAGTAGGGCTCATGATCATGATGGCATGGCTTTATCAAATACTGCATCTGCACAGAGTGACAATGCGACAGCCGCTGCTGCAGAATCCATCATGTACCTCACAGACAACATGCTAATGATGGAACATCAACAAGATGCTGTCACAGAGGAATATATCACCACAGAGGCTATAGAGGAAGAGATAGTGGAACATGTGGTACAAGAAGAAGTAATTTCTGGGGAATGGGGAGAGGGATGCCCTGAGGAGATTGTGGTTGGATCGGAGGAAGCGGTGGGAGCTGCGGATACGAACCAGGACGAATGCGACATCCCTCTGCCCACCGATCAGGATGAATACACGGCGGCGCGGCCGTATCCTTGCGATTTTTGCAGCCGCCGATTCAGGAAGAAGGCCAACCTCATGAACCACATGGTGGCCCATCAGACCGACCGACCTCACGGTTGCAACCTGTGCGGCGTGCGGTACATGAGGAAGAGCGACCTCATGAATCACCTCAAGATACATGCATATATACCTGAAGGGGCTCCTTTGGATGAAGAAATACAAGCAATAGAGATAGATGACGACGATAAGAGAAAGAGAGTAAAAGCACAGCTGgtgaaaaagaagaagaaggggTCCAAAATTAAGGATGAATTTGAAAACCTTGAAGTTGCATCAAGTTCTCGCTCTTATAACTATGTTGCTGAAGATATGGAACAAATAGGGAACAGTGTGCAGAAAGTATATCAATTTTTACCTGATGACCAACAGGAAGGCTCTAGGTTTCCGATAGTTGATCCAAGGAAACCATTTGTGTGTCAGCACTGTGGTGTTGGTTTTGCTAGGGAAAAGGCTCTATATTCTCATACGAGATTGCATGCCGAGGGTGACAGTCCGTTCGAATGCCAGAAGTGCGGTGAAATGTTTTGGGATTCTGGTCGGATGCACGAGCACAAGAAGCAGAAACACGGCGACCTAGAGGAATTCGACGACGCAGACGAAGACGGCGATTATTCGGAGGAGGATTCCAAGTACGGTACATTTTATTGCACCACTTGCGGCCTGTCCTTCCACAGGCAGGACAACCTGCGCAGACACCAGCGCGTTCACGTAAAGGAGGAGTACTCGAACGAGTCTGAGTACGCGCACGTGTGCAACGTGTGTGGAGAATCATTCACCGAAGCTCTAGATGTTCTGGCGCACGCCGAAGTGCACGCCAGGACTACCGAACACCGCTGCATGATATGTGGCGAAGTGTTGCAGGACGAAACGTCGCTGGCGGTACATGTACAGGCAAAACACGGCAAAAGCCTCCCACCCAATACCTGTATGTTATGTGGAAGGGCATGTAAAGATCGTCGTACACTCCTCAAACACTCGTGGGAACATTCGAAAGAAAAGGTTTTCAATTGTCCCAAATGCAACAAGACCTTCCACAACAAAGCGCGACTGAAGAGGCATATGCTGTCACATAGGAACAAAGTGGTCAGCTGCGAGGTGTGCGGCGAAGAGTTCCCCGACGGTCGTACCCTGATGAACCACCGGCACAGCCATTCGAGCGTTAGCGGCAGGCAGTTTCCCTGTCGCGAGTGTGGCAAGACGTTCGGCTCGCGCAGCTCTCAGCAGATCCACATCCGCATCCATACCGGCGAACGGCCGTACGGCTGCCGGTTCTGCTGGAAGGCGTTTGCGGACGGTGGGACGCTGAGGAAACACGAGAGGATACATACCGGAGAGAAGCCTTATGCTTGTGCTGTGTGTCCAAGAGCTTTCAATCAGAGGGTAGTGCTCCGAGAACACATCAGGTCCCATCATTCTGGTCCTGATCCAAAATACTCTAACAGTATGACCCCATATTGTTGTGCGGTATGTTCAGATATGTTCGCCACTTCTCAAGACCTGATTCTCCACTTAATCCATCACTGCGACATGAACACGGCCATGAAGCGTCAACCTCAAGTGGGCCCCAGGAAATACAAGCGACGGAGGAAACTAAAACCTCATGAGTTGGAAGTGATCTCTGGCAGGGTTGAGGGagatgataatgataataatttagaTACGATAGAGGACCACTTCAACCACACGGAAGAGTCTGAAGACGAGCCTGAGCGACGGAGGCGGAGGCGGCAGCCGAAGAAGACTGCAGGCGCGGCGACATCACCCGGGGACGGAGAGGAGCATATGCAAGACCTCATGATGTTCGAAGAACATGATGCCGAGGCCACAGCAGCAGCCGTGGAGAGTCTAACCAACCCTTCTCCCAACTCAACCAAGCAGACACCCACCAAGAACAAGCAGAAGAAGTTCAAAGGAGACCAGAACGTACCTAGCAGACCAAAGATGATCCATACCCAAAAAACCAGAGTGCCAGTCGAAACGTGTGAGGATGGTAGGATTAGACATAAAACTAGAACTCTTGTAACAAGGACGCAACCAACAGAAATCAAATCTAGCACAGGAGACAGAATACGGCCGCGAACAAAAAACGTGAGCTACCATGTGCTGCAACCAGAAAAATTACCTCTAGCTACTTTCCCAGATCTTGACAGAGACACACAGCAAGCTGTGGATAGTATCTTGAAAGAGGAAAACGTAGGTGCAAATGAGACGATATATGACACCCAGCAACATACTAATGGCATTGTGTATATGGATACATTGGATCAGCCGCCAGGGgtGGCTGCCGAACAAACAGTGGAAACTGAAGTTATGAGTGAAGTTATAGAGTCCACAAGGATTCGAACCAGAAGTTCCAGTAGCAATAATAGTGGCAATGCCAGTTTAAAACCTGGAAGGCACGTTATTGGGCCAGGAAGCAAGGTACGCCTGATAAAAGAAGGTATGATAGTTTCTAAAGCAAAAACACTGCGCAGAAGTCAGGATACTGAAACAGAAAACGTATTATCAGATGTCCCAAATACAAATAACGTACCTCCAGTTGTGGTGAAAGGGAATGAATCTCCTACTCCAGAGGCTGGGGAGGAGTATATGCCTGCAGTCATTGTGAAGCAAGAGATCATTATTAAACCTGAGATGGTGAACGTGAAGCAAGAGATGCTCGATCCGTCGCCCCTCCACGAGCTGGCCGAGATATCGATGCAACACGCGAGCGCGAACGCATGCGCCGCCCCCTCAACTGGAGGAGGCTTGTTCAGGTGCGAGATGTGCAGCGAGGTGTTCAACGATAGGGCGCAGCTGCTGGTGCACGTGCCGGTGCACATTTGA
Protein Sequence: MEEDFGLTWEDSAAVQTEEVICGIESEILPSDEFHGGGEVTVEEVVEEGEVILTDHGPEEGEVIEEVDQKVISRAHDHDGMALSNTASAQSDNATAAAAESIMYLTDNMLMMEHQQDAVTEEYITTEAIEEEIVEHVVQEEVISGEWGEGCPEEIVVGSEEAVGAADTNQDECDIPLPTDQDEYTAARPYPCDFCSRRFRKKANLMNHMVAHQTDRPHGCNLCGVRYMRKSDLMNHLKIHAYIPEGAPLDEEIQAIEIDDDDKRKRVKAQLVKKKKKGSKIKDEFENLEVASSSRSYNYVAEDMEQIGNSVQKVYQFLPDDQQEGSRFPIVDPRKPFVCQHCGVGFAREKALYSHTRLHAEGDSPFECQKCGEMFWDSGRMHEHKKQKHGDLEEFDDADEDGDYSEEDSKYGTFYCTTCGLSFHRQDNLRRHQRVHVKEEYSNESEYAHVCNVCGESFTEALDVLAHAEVHARTTEHRCMICGEVLQDETSLAVHVQAKHGKSLPPNTCMLCGRACKDRRTLLKHSWEHSKEKVFNCPKCNKTFHNKARLKRHMLSHRNKVVSCEVCGEEFPDGRTLMNHRHSHSSVSGRQFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHIRSHHSGPDPKYSNSMTPYCCAVCSDMFATSQDLILHLIHHCDMNTAMKRQPQVGPRKYKRRRKLKPHELEVISGRVEGDDNDNNLDTIEDHFNHTEESEDEPERRRRRRQPKKTAGAATSPGDGEEHMQDLMMFEEHDAEATAAAVESLTNPSPNSTKQTPTKNKQKKFKGDQNVPSRPKMIHTQKTRVPVETCEDGRIRHKTRTLVTRTQPTEIKSSTGDRIRPRTKNVSYHVLQPEKLPLATFPDLDRDTQQAVDSILKEENVGANETIYDTQQHTNGIVYMDTLDQPPGVAAEQTVETEVMSEVIESTRIRTRSSSSNNSGNASLKPGRHVIGPGSKVRLIKEGMIVSKAKTLRRSQDTETENVLSDVPNTNNVPPVVVKGNESPTPEAGEEYMPAVIVKQEIIIKPEMVNVKQEMLDPSPLHELAEISMQHASANACAAPSTGGGLFRCEMCSEVFNDRAQLLVHVPVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -