Basic Information

Insect: Bruchidius siliquastri
Gene Symbol: -
Assembly: GCA_949316355.1
Location: OX438530.1:13497671-13506086[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00015 0.011 16.3 1.8 2 23 147 168 146 168 0.97

2 16 0.0059 0.44 11.3 2.1 3 23 176 196 175 196 0.96

3 16 0.00061 0.045 14.4 0.9 1 23 203 225 203 225 0.96

4 16 0.00066 0.05 14.3 1.5 1 23 341 363 341 363 0.99

5 16 8.7e-07 6.5e-05 23.3 5.2 2 23 370 391 369 391 0.97

6 16 0.001 0.076 13.7 3.1 2 23 415 437 414 437 0.94

7 16 3.7e-05 0.0028 18.2 1.9 2 23 522 543 521 543 0.96

8 16 4.3e-05 0.0032 18.0 2.1 1 23 549 572 549 572 0.95

9 16 1.4e-06 0.00011 22.7 0.8 1 23 577 599 577 599 0.98

10 16 1.2e-06 9.3e-05 22.8 2.3 2 23 612 633 611 633 0.97

11 16 1.5e-07 1.1e-05 25.7 1.0 1 23 640 662 640 662 0.97

12 16 2.5e-05 0.0019 18.7 1.6 3 23 674 694 672 694 0.92

13 16 8.4e-05 0.0062 17.1 4.4 1 23 700 722 700 722 0.99

14 16 3.5e-05 0.0026 18.3 1.7 1 23 728 750 728 750 0.96

15 16 6.4e-08 4.8e-06 26.9 0.2 1 23 756 778 756 778 0.99

16 16 0.0001 0.0075 16.8 0.1 1 23 784 808 784 808 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00015	0.011	16.3	1.8	2	23	147	168	146	168	0.97
2	16	0.0059	0.44	11.3	2.1	3	23	176	196	175	196	0.96
3	16	0.00061	0.045	14.4	0.9	1	23	203	225	203	225	0.96
4	16	0.00066	0.05	14.3	1.5	1	23	341	363	341	363	0.99
5	16	8.7e-07	6.5e-05	23.3	5.2	2	23	370	391	369	391	0.97
6	16	0.001	0.076	13.7	3.1	2	23	415	437	414	437	0.94
7	16	3.7e-05	0.0028	18.2	1.9	2	23	522	543	521	543	0.96
8	16	4.3e-05	0.0032	18.0	2.1	1	23	549	572	549	572	0.95
9	16	1.4e-06	0.00011	22.7	0.8	1	23	577	599	577	599	0.98
10	16	1.2e-06	9.3e-05	22.8	2.3	2	23	612	633	611	633	0.97
11	16	1.5e-07	1.1e-05	25.7	1.0	1	23	640	662	640	662	0.97
12	16	2.5e-05	0.0019	18.7	1.6	3	23	674	694	672	694	0.92
13	16	8.4e-05	0.0062	17.1	4.4	1	23	700	722	700	722	0.99
14	16	3.5e-05	0.0026	18.3	1.7	1	23	728	750	728	750	0.96
15	16	6.4e-08	4.8e-06	26.9	0.2	1	23	756	778	756	778	0.99
16	16	0.0001	0.0075	16.8	0.1	1	23	784	808	784	808	0.93

Sequence Information

Coding Sequence: atgaataatgaagaTACAGATTTGCTAATAGACAAAATATGCCGCTGTTGCATGTTTCAGAACGAAAATATGCACAATATATTCGAAAGTAAAAATCCGGCAAATCATGGGGCAGTTCTACTATCTGAAATGTTGGTGGCTTGTGCTTCTGTTGaggtgAAAATGGATGATGGTCTACCAAAAAACTTGTGTGAACTATGTAAAGAAAAGCTCAATAATTGCTATGAGTTCAGGACACAATGTCAAAAGTCTGACTCAAAACTCAGAAAACTAAGCACCCCAGAATCAAAAACATCTACCAAATTAGAAGAAGACATTGTAGTTCAGCCTGATGTACTTGACAACCTGTTTgatgaagaagatgaaataCCCCTCATTCACCGTAgggaaaaaaggaaaaaggaTGTTAGAGTGAAAAAGGATGATAGTCATTTGATATCATGTAATGTCTGCCATAAGGTACTTTACACAAGAAAAGGTTTGAAGGTGCATATGCGACAACATACCAGTGATAAAGTTAGGAGCTGTCTATTTTGTGATGCAAAATATGTTCGCACTAACCATTTGATGAGACACATCAGTACTCATGATAAGCCTGGTGTTATTCATCCATGTGAGCAGTGTGACAAGTCTTTTGAGGCAGCCCAAGAGCTTTATAAGCATACTAAGGAACATGAAGAGTGTCATAATAAGGTTGATGGTGACAAAACAATAAAAGTGGAAGTAACTGACATGCCAGCAGAAGTAAAAACAGAAGACATAGAAAATGGTGAAGAACTTCCTAGGGAGCAGCTAAATGAGTCAGTGAATGATTCTGATAAATTGGTGGTGGCAGAACAATTTGAAGATGATGTCATGAATGGTAATGACTTTCCATacagtgatgatgaagatgataGAGGAGATGACAGTGATGCTGATTTTGTCGTGAGTGAGCCTAAAGCTGGACCTAAGAGAAAGACTActgAGAGAAAAGGTAAAAAAGGTAGGAGGAAAAAAGCAGAAGACGACAAGGCACTGTATGAATGTAAGGAATGCAACAAATTTATGActacatatttaggattaaggaTTCATATGAGAAGGCATACTGGCTCTGATTTATCGATGTGCAAGTTGTGTAACAAAACGTTTATAAGACGGAGTCACCTCACGAGGCATATGAAAAGTCACGGAATTGAAGAGGCTGATATTGAGAAGAACATTCAGCCTGCATTTGAGGGAAAAGAAAAAAGGATTATGGAATGTGACTTTTGTGACAGGAAATTCAAGTATAGGAAAAGCTTTCTGCACCACATGCAAGCAGAGCATGCAATGTCCGAGGATAGTGACATTGAAAAGGCTGCTGCAGCAGCTGCAGGGCAGAAAGGTGCTGCTAAGCCTTATGCTGATATAATGAAAGATGTTGAGGATGGTGCCAGTGAGGATCACAATGAAGATGGAATGGAAGAAGGTTACCCTGTGAAAATCCAACCGACTGGTGAGGATGACGAAGAATGGAATTTACCTCTGCCTGATAACACAGAGAATATCGTCACTAAGAAGACTAGGAGTAAGAATCAAGTATGCCACGTGTGTGGGGCTACATTTGCCAGGGTGAATCACCTGACGCGCCACATGACGTTACACCGCAACGTCTTGACCCACCCGTGCGACCGTTGCGACAAGGCGTTCAGTACCGAGGAGCACCTGAAGACTCACGTGGAAAAGGACCACGTGAACAAACCGTACGTGTGCACGGTGTGCAACAAACCCTTCAGCCGCGGCGAGCATCTCATCAGGCACCTGAAAGTGCACCAGTCCGGCAACGAGAAGGAGAGCGTTACGCTATTGAGGTGCTCCATTTGCGATACCACCTTCACCAGGTCAGATCACTTAGCTCGTCACACGAAGATTCATTTGCTGCAGGACAAGCGGCACGTCTGTGTCGATTGTGGTAAAGCATTCAACAGACTAGATAATTTGAAGACTCATCAACGCATCCACACTGGGGTGAAAGATAATTCCAAACTGCATCTCTGTATATATTGTGGCAAAGAATTCAATAATTCTAGTAATATGaTTGTACATATGAGAAGGCATACTGGTGAGAGACCATACAAGTGCAGCGAGTGTGGTAAAGGCTTCCCCAGATCACACGATCTGAAATGCCATGAAAGAACACATTCTGGGGAGAAACCGTATCTGTGTACTCTCTGTGGTAAATCTTTCAACAAAAGCAACAAACTCCTACGTCATAGTCGTGTACACACAGGAGAACGGCCGTATGTATGTAACATTTGCGGCAGGGCATTCACCCAATCAAATGATTTGGCGTTGCACATGCGCAGACACACTGGAGCTCGACCCTATGCTTGCGGAGTTTGCCCTGCTAGGTTCATCCAAAGCGCTCAACTGAAAAACCATCGAAGGACTACAGGTCATTGGATGGATACACAACCTGATCTTAAGGGTGGACATAGAGTGGAACCTGTTACACCTGCTCACGAACCAGCACCAATAAGGTTCAAGTCTTCCAGATGGGCAGCAGAAGATCGGTTAGGGGGGTTGAAGAAAGAAGATGACGCGTCTGAGGTGAGTTCCAAGTCGGAAGGACAGATAATGCTGCAGTCTCAGTCAGGTAATGAAAATACTCCAACGATATCAGTGGATATCCAGCCCATGCAAGGAGGCCAACCTCAACGTATTCTCATGGGTATCATGGGAAACATCAAGTTGCAGAATGAGGTTCAGCCGCTGCTTATCGACGGCACGAAGCTGGTGGAGTTGCACCAGGCGAGCCTCGTGAACCTGAGCACCGTCATCCAGACGAACGCTGGCGAGGAAATCAAGCTCAAATCGGAGGGAAGTGGGGGCGGGTTCACCGTGGCCGCCCCGGATAAGCCAGACGATTCCGAAGCAGGCGGTTCTTTCCAGGATGCCGCAGTCATCTACTCTGCCGAACACACCCCTACCACCTATACGACCAGCGAAGCGTTCAATTTCCAAAACTATCACTAG
Protein Sequence: MNNEDTDLLIDKICRCCMFQNENMHNIFESKNPANHGAVLLSEMLVACASVEVKMDDGLPKNLCELCKEKLNNCYEFRTQCQKSDSKLRKLSTPESKTSTKLEEDIVVQPDVLDNLFDEEDEIPLIHRREKRKKDVRVKKDDSHLISCNVCHKVLYTRKGLKVHMRQHTSDKVRSCLFCDAKYVRTNHLMRHISTHDKPGVIHPCEQCDKSFEAAQELYKHTKEHEECHNKVDGDKTIKVEVTDMPAEVKTEDIENGEELPREQLNESVNDSDKLVVAEQFEDDVMNGNDFPYSDDEDDRGDDSDADFVVSEPKAGPKRKTTERKGKKGRRKKAEDDKALYECKECNKFMTTYLGLRIHMRRHTGSDLSMCKLCNKTFIRRSHLTRHMKSHGIEEADIEKNIQPAFEGKEKRIMECDFCDRKFKYRKSFLHHMQAEHAMSEDSDIEKAAAAAAGQKGAAKPYADIMKDVEDGASEDHNEDGMEEGYPVKIQPTGEDDEEWNLPLPDNTENIVTKKTRSKNQVCHVCGATFARVNHLTRHMTLHRNVLTHPCDRCDKAFSTEEHLKTHVEKDHVNKPYVCTVCNKPFSRGEHLIRHLKVHQSGNEKESVTLLRCSICDTTFTRSDHLARHTKIHLLQDKRHVCVDCGKAFNRLDNLKTHQRIHTGVKDNSKLHLCIYCGKEFNNSSNMIVHMRRHTGERPYKCSECGKGFPRSHDLKCHERTHSGEKPYLCTLCGKSFNKSNKLLRHSRVHTGERPYVCNICGRAFTQSNDLALHMRRHTGARPYACGVCPARFIQSAQLKNHRRTTGHWMDTQPDLKGGHRVEPVTPAHEPAPIRFKSSRWAAEDRLGGLKKEDDASEVSSKSEGQIMLQSQSGNENTPTISVDIQPMQGGQPQRILMGIMGNIKLQNEVQPLLIDGTKLVELHQASLVNLSTVIQTNAGEEIKLKSEGSGGGFTVAAPDKPDDSEAGGSFQDAAVIYSAEHTPTTYTTSEAFNFQNYH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00260816;
90% Identity: -
80% Identity: -