Bsil014831.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bruchidius siliquastri
Gene Symbol
-
Assembly
GCA_949316355.1
Location
OX438536.1:4711070-4721769[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 40 0.0006 0.045 14.4 0.2 3 20 5 22 4 23 0.97
2 40 1.7e-05 0.0013 19.2 1.0 1 23 30 53 30 53 0.96
3 40 9.8e-05 0.0073 16.9 3.0 1 23 60 83 60 83 0.97
4 40 0.00079 0.059 14.0 4.9 1 23 88 110 88 110 0.99
5 40 0.0073 0.54 11.0 2.6 1 23 119 142 119 142 0.97
6 40 2.9e-05 0.0022 18.5 0.1 2 23 149 170 148 170 0.97
7 40 6.4e-06 0.00048 20.6 0.1 1 23 176 198 176 198 0.98
8 40 0.00099 0.074 13.7 0.1 1 21 204 224 204 225 0.97
9 40 0.044 3.3 8.5 0.5 6 23 236 253 236 253 0.98
10 40 0.0032 0.24 12.1 0.1 3 20 260 277 260 278 0.97
11 40 0.00015 0.011 16.3 4.2 1 23 285 308 285 308 0.96
12 40 0.00027 0.02 15.5 0.8 1 23 315 338 315 338 0.97
13 40 0.00052 0.039 14.6 0.1 1 23 343 365 343 365 0.95
14 40 0.0023 0.17 12.5 3.2 1 23 374 396 374 396 0.98
15 40 0.0021 0.16 12.7 1.0 3 23 404 424 402 425 0.94
16 40 0.0027 0.2 12.3 0.1 1 23 431 453 431 453 0.97
17 40 3.9e-06 0.00029 21.3 6.2 1 23 474 496 474 496 0.98
18 40 0.00042 0.031 14.9 5.0 1 23 501 524 501 524 0.95
19 40 0.23 17 6.3 3.6 2 23 531 553 528 553 0.89
20 40 0.00012 0.0087 16.6 1.0 3 23 561 582 559 582 0.95
21 40 6.8e-05 0.005 17.4 4.4 1 23 587 609 587 609 0.98
22 40 0.34 25 5.7 2.2 1 23 618 639 618 639 0.96
23 40 1.1e-05 0.0008 19.9 2.4 2 23 648 669 647 669 0.97
24 40 1.1e-07 8e-06 26.2 0.7 1 23 675 697 675 697 0.99
25 40 1.5e-07 1.1e-05 25.8 0.5 1 23 703 725 703 725 0.98
26 40 8.3e-08 6.2e-06 26.5 0.7 1 23 758 780 758 780 0.97
27 40 0.0044 0.33 11.7 1.5 1 23 785 808 785 808 0.92
28 40 0.31 23 5.8 2.8 2 23 815 837 814 837 0.92
29 40 4.1e-05 0.003 18.1 2.9 1 23 843 866 843 866 0.95
30 40 1.1e-05 0.00082 19.9 3.0 1 23 871 893 871 893 0.98
31 40 0.027 2 9.2 1.3 1 23 902 923 902 923 0.97
32 40 5.7e-05 0.0043 17.6 0.9 2 23 932 953 931 953 0.97
33 40 1.2e-06 8.6e-05 22.9 0.4 1 23 959 981 959 981 0.99
34 40 0.63 47 4.9 0.1 2 19 1041 1058 1040 1061 0.92
35 40 0.061 4.6 8.1 2.4 1 23 1067 1089 1067 1089 0.96
36 40 0.22 17 6.3 1.1 1 21 1230 1250 1230 1251 0.95
37 40 0.0068 0.51 11.1 0.5 3 23 1259 1280 1258 1280 0.94
38 40 0.012 0.89 10.3 1.5 2 23 1285 1306 1285 1306 0.97
39 40 0.0045 0.33 11.7 4.1 1 23 1312 1335 1312 1335 0.96
40 40 6.4e-05 0.0048 17.4 2.6 1 23 1340 1362 1340 1362 0.98

Sequence Information

Coding Sequence
ATGGAGCGTCTTTGTCAGATATGCGGAAAGACTTTCATCGGCGAACACTCACTGAAGAGTCACATGGCCTGCGTTCACACAAAACCTCACGTTTGCGAGATCTGTAAAAAGGCCTTCAGGTTGTACTCAGAACTCAAGGTGCACATTAGATACATTCACTTCAACCAACCGAGACCTCATCAATGCAAGCTTTGCGATAAAAGTTTCGACAAGAACACCCATCTGGTCGAGCACGTTAAGGTAGTCCACGAAGGACTGCGTTACACTTGTGACACTTGCGGTAAAACTATGAAATACAAGACACACTATAGAGAACATATCAAAACCCATAAAGATGACTACGTGGAGAAGAAGTACGAATGCAAAATATGCCAAGCTGTGCTGAAAACGTCACATGGCTTCAGCCACCACATGGCTAGGAGCCACTACAACAAGACCCAGGTGGTTTGTGACGTGTGCGGTCAGAAGCTATCTGACAACGCCTCGCTAACCATTCACATGAGGAGACACAACAATGAGAAGCCTTTTGAGTGTCAGGTTTGCGGTAAAGGCTTCCCATCTAAAGGGACGTTGACAGTGCATGGTAGGGTGCATTCCAAAGAGAAGCCCTATCAGTGCAGTTTGTGTCAATCGAGGTTCGCGCAAAATGGGGCCCTTATCATTCATATGAGGTTTgtgcaatttcaaaatttctacaAGAGATGCTGCGGCCTAGGCTTCCGAAGCCTCAAGTCATTCACTAGACACCAAGAAAGCCATGACAGTGGAGAGGTTGGATGTCCAACTTGCGGCAAGGTTTTCATGAGCATTCACGCGTTGAAAAGTCACATTGCTTGCGTTCACTACAAACCCCACATCTGCGAAATGTGTGACAGACAGTTCAGACACCGATCCAAACTGGAGATCCACATTAAGTCTTTCCATTACAATGAACCAAAGCCTCACCAATGCCAGCTTTGTGATAAGAGCTACAACAAGAACGTTCAACTGGTAGAACATGTCAAAGTCGTCCACGAAGGCTTGCGTTACCCTTGTATCATTTGCGGAAAGACATTCGCATATCAGGCGAAATGGAGACAGCATATAAAGGAACATTCGGAGGATTACGtgaggaaaacttacatctgCGAGCTTTGCAGCACTGTGTTTGAGTCTCGACATGGGTACCGGCACCACATGGCAAAGCACCAGAACAAGACTCAAGTCATCTGTGACACGTGCGGGCATGTGGCTTCTGACATCTTCAATTTGAGGATTCATATCCGTAGGCACCACAGCAGCAAAGAGTCTTTTGAGTGCAATGTATGTGCGAAGGTGTTCGCTACCGATACTGGCTTGAGATTGCACAGCAAGATTCATAACGAGGCGAAGCCAGAACCGGTGGAGTCAACCTCAAAGCAGATGGATTGCAGCAAAACCTTCAACTGTCATGAGTGCAAGAAGTCTTTTTCATCTTCCTCTAAACTAAATCGTCATAAAAACACCCACGCCGAACAAAAATTCACCTGCGAAATGTGCAATAAAGTATTCCACAAAAAAGCTAACCTCAAATATCACCAGAACTTCAAACACTTCCGGAAATTCACCTGCAAATGTTCCTACTGCGACCAAGTGTGCTTGAGCAAAAAGGGCCTGAAGGTGCACATCGACAACGTTCACCTGAACAAATACAAATTCGGATGCGACAAGTGCCCCAAAAGTTACAATTCCAGGAGCAAACTGGCCAAACACATCAAGTTCGACCACGAAGGGCTGCGTCACCAGTGCCCCTTGTGCGACAAAGTCTTCAAAGACGAGCGACACTTCAATATGCACACCAACTCGCACGACCCAGGTTACAGCAAGCCGCAGTTCACTTGCGAGGTGTGCCACAAGGTTCTCGGCATGAAATCCTATGATCGACACATGAAGATGCATTCCGGAGACAATTATACGAATATCGTTTGCGATTTGTGCGGTAAATCGATGTCAACGAAGAGCCATTTGACCAATCACAGACGAACGCATACCGGCGAGAAGCCGTACGAGTGCAATTTCTGCGGGAAGACATTCGCTAGGAACGAGACTTTGATAGCTCATAGAAGGACGCACACTAAAGAGAGGCCTTACGTATGTGACGTGTGTTCGAAGGCGTTCACTCAAAAATCTGCGTTGACTATACATATGCGGTATCATACTGGTGAAAGACCTTACGGGTGTGCGATATGTTATAAGAGGTTGCATATAAAGAAGGAAAAATCAGAGCACGCCACTGAACCGAAAGTGAAGTACTACAATTGTCCCGACTGCTCCAAAACATTCTCATCTCCATCGAATTTGAGAAAACACAAGATAGTCCACTCTGACAAAAAGTTTGCGTGCGATCTATGCGACAAAGTCTTCCTACAAAAATACAACCTGGAGTACCACAAAAACTTCAAACACTTCAGAAAGTTTATCTGCAAATGCGACTATTGCGACCAAGTGTGTCTCAACAAGAACGGTCTCAAACTTCACATAGACAATGTCCATCtgaaaaagtacaaattttGCTGCGACAAGTGTCCGAAAGGCTACAACACTCAGAGCGAGCTCACCAAACACATCAAGTTCGACCATGAAGGTGTCAGATACAACTGCCTACTTTGCGGAAAGGAGTTCAAAGACAACAACCATTTCAAAGTGCACATAAAGACGCACGATCCAAACTACATCCCACCACAGTTCACGTGCGAGATATGCCAGAAAGTCTTGTCGATGAAGTCCTATGACCGACACATGAAGATGCATTCTGGCGAGAAGGACTCGAACGTAGTTTGCGACATCTGCGGTTTGGTCATGTCAAGCAGGAGCCATCTGACCAACCACAGACGGACGCACACTGGAGAGAAACCTTACGAGTGTGAGTTTTGTGGGAAGACCTTCGCCAGGAACGAGACCTTGGTGGACCATAGGAGAGTCCATACTAAAGAGAGACCCTACAGGTGCGAGACTAATGTGAGTGGACCTGAAATAGTGTCCAGTGACGTCAAGAATGCTAGTAATGGCTTGTTTATTGCAGAGTTTACCTTTCACTGGTACGACATGGCAGTACAAGATATATACGACGACGATGAcgaatatgaagatctaaacaACATCCAATGCGGAATGTGCAACgtcatttttccaaataaacagAAATTCCTGGACCACTCTTCAAAACTTGTCGGAGGTTTTTACGTATGCTGCAAATGCAAAGCTCGCTTCAAAGACGTGGACGCCCTCTACAACCACTTCGACTCCCACAGACAATCAAACAGCAATGAGATTCTACTCAACTACGACGACCAAGAGGTGCTGATGCAATCATCTGAAGCAAACGATCAATTGTTGTACATCTTAGATGAAGAGACGCAATGCGTCAATGAAGTTGTTGTGGAAGAACAGCAAAGACCCACCAAAGCTATGGAGTTAGTCAACATTGAACATGGCTACGTGATGAACGACGACGAGAAGATAATCGAAGAAGAAGAGCTGGAAGATGAACACGGGAACATCGTAATAAGACGTCGGATATTATCAGGAACTCCAAGGAAGGTGTACAGACGCCAATCTCAGACCCCGAACAAAAGACAACCTCAACCGAAAAAACGGCATGAAGAACCTGACTTCTCAGCGACGAACTATGAATACGTCGAGGCCAATGCGGTTATAGAAGTACCTCATTTCAAATGCATGAGATGTGAGCAGCTTTTCATCAACAAATTCGGCTTCTTCAGACACATCGAGAAAGGCAAATGCTACATAAACAACTGCGATGTTTGCGAAGCGACGTTCACTAAGAACAGCGATTTCTTTGATCATTACATGGAAAATCATACAGATCGCGCTGTTTGCAATTTTTGCTTCAGAACGTTCATGTATGAGAAGAACGTCAAAGAGCACATGTTGCGCCATCTAGATCAGTTCAGGCATCGTTGCGAGGACTGCAATAAAGGGTTCTACACGGTGCGTGAGTACAGGAACCATTACAAGAACAGGCATATGGGAATCAGGCATAAGTGCGAAGTGTGCAGTAGAACTTTTGCTGATGAATACTATTTTAAAAGGCACCTGGCCACACATGCCAAAGCTACTGGGCATGCTGATGGTACAGTCATATCGGATTAG
Protein Sequence
MERLCQICGKTFIGEHSLKSHMACVHTKPHVCEICKKAFRLYSELKVHIRYIHFNQPRPHQCKLCDKSFDKNTHLVEHVKVVHEGLRYTCDTCGKTMKYKTHYREHIKTHKDDYVEKKYECKICQAVLKTSHGFSHHMARSHYNKTQVVCDVCGQKLSDNASLTIHMRRHNNEKPFECQVCGKGFPSKGTLTVHGRVHSKEKPYQCSLCQSRFAQNGALIIHMRFVQFQNFYKRCCGLGFRSLKSFTRHQESHDSGEVGCPTCGKVFMSIHALKSHIACVHYKPHICEMCDRQFRHRSKLEIHIKSFHYNEPKPHQCQLCDKSYNKNVQLVEHVKVVHEGLRYPCIICGKTFAYQAKWRQHIKEHSEDYVRKTYICELCSTVFESRHGYRHHMAKHQNKTQVICDTCGHVASDIFNLRIHIRRHHSSKESFECNVCAKVFATDTGLRLHSKIHNEAKPEPVESTSKQMDCSKTFNCHECKKSFSSSSKLNRHKNTHAEQKFTCEMCNKVFHKKANLKYHQNFKHFRKFTCKCSYCDQVCLSKKGLKVHIDNVHLNKYKFGCDKCPKSYNSRSKLAKHIKFDHEGLRHQCPLCDKVFKDERHFNMHTNSHDPGYSKPQFTCEVCHKVLGMKSYDRHMKMHSGDNYTNIVCDLCGKSMSTKSHLTNHRRTHTGEKPYECNFCGKTFARNETLIAHRRTHTKERPYVCDVCSKAFTQKSALTIHMRYHTGERPYGCAICYKRLHIKKEKSEHATEPKVKYYNCPDCSKTFSSPSNLRKHKIVHSDKKFACDLCDKVFLQKYNLEYHKNFKHFRKFICKCDYCDQVCLNKNGLKLHIDNVHLKKYKFCCDKCPKGYNTQSELTKHIKFDHEGVRYNCLLCGKEFKDNNHFKVHIKTHDPNYIPPQFTCEICQKVLSMKSYDRHMKMHSGEKDSNVVCDICGLVMSSRSHLTNHRRTHTGEKPYECEFCGKTFARNETLVDHRRVHTKERPYRCETNVSGPEIVSSDVKNASNGLFIAEFTFHWYDMAVQDIYDDDDEYEDLNNIQCGMCNVIFPNKQKFLDHSSKLVGGFYVCCKCKARFKDVDALYNHFDSHRQSNSNEILLNYDDQEVLMQSSEANDQLLYILDEETQCVNEVVVEEQQRPTKAMELVNIEHGYVMNDDEKIIEEEELEDEHGNIVIRRRILSGTPRKVYRRQSQTPNKRQPQPKKRHEEPDFSATNYEYVEANAVIEVPHFKCMRCEQLFINKFGFFRHIEKGKCYINNCDVCEATFTKNSDFFDHYMENHTDRAVCNFCFRTFMYEKNVKEHMLRHLDQFRHRCEDCNKGFYTVREYRNHYKNRHMGIRHKCEVCSRTFADEYYFKRHLATHAKATGHADGTVISD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-