Bsil014835.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bruchidius siliquastri
Gene Symbol
-
Assembly
GCA_949316355.1
Location
OX438536.1:4750003-4761939[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 42 0.25 19 6.1 0.4 6 20 3 17 2 18 0.94
2 42 2.6e-05 0.0019 18.7 4.0 1 23 26 48 26 48 0.98
3 42 0.0069 0.52 11.0 1.3 1 23 54 76 54 76 0.98
4 42 0.018 1.3 9.7 0.3 2 22 83 103 83 105 0.90
5 42 0.00029 0.022 15.4 1.2 1 23 110 132 110 132 0.98
6 42 8.7e-05 0.0065 17.0 1.9 2 23 143 165 142 165 0.94
7 42 0.00025 0.018 15.6 0.9 1 23 172 194 172 194 0.98
8 42 4.6e-07 3.4e-05 24.2 2.0 2 23 201 222 200 222 0.97
9 42 3.5e-07 2.6e-05 24.6 0.3 1 23 228 250 228 250 0.98
10 42 0.002 0.15 12.8 1.6 1 23 256 279 256 279 0.98
11 42 0.049 3.6 8.4 4.7 1 23 320 342 320 342 0.98
12 42 0.46 34 5.3 0.8 1 23 355 377 355 377 0.98
13 42 0.0019 0.14 12.8 0.2 2 20 384 402 384 406 0.90
14 42 0.00012 0.0089 16.6 1.7 1 23 411 433 411 433 0.96
15 42 0.013 0.94 10.2 4.3 2 23 444 466 443 466 0.96
16 42 1.4e-05 0.001 19.6 1.3 1 23 473 495 473 495 0.97
17 42 1.1e-05 0.0008 19.9 0.4 2 23 502 523 501 523 0.97
18 42 5.9e-07 4.4e-05 23.8 1.4 1 23 529 551 529 551 0.99
19 42 4.3e-05 0.0032 18.0 1.2 1 23 639 661 639 661 0.98
20 42 0.00053 0.04 14.6 2.2 2 23 668 689 667 689 0.93
21 42 1.9 1.4e+02 3.4 6.2 1 23 746 768 746 768 0.97
22 42 0.0019 0.14 12.8 3.3 1 23 804 827 804 827 0.97
23 42 0.0026 0.19 12.4 0.1 1 20 862 881 862 884 0.92
24 42 2.6e-05 0.0019 18.7 1.8 1 23 890 912 890 912 0.97
25 42 0.00091 0.068 13.8 0.3 1 23 918 940 918 940 0.99
26 42 6.3e-05 0.0047 17.5 4.3 1 23 946 968 946 968 0.97
27 42 0.00015 0.012 16.2 4.3 1 23 974 996 974 996 0.97
28 42 0.0095 0.71 10.6 2.0 1 21 1004 1024 1004 1025 0.95
29 42 0.0052 0.39 11.4 8.0 3 23 1038 1058 1037 1058 0.98
30 42 1.2e-06 8.6e-05 22.9 1.5 1 23 1165 1187 1165 1187 0.99
31 42 2.5e-05 0.0019 18.7 2.2 1 21 1194 1214 1194 1215 0.95
32 42 1.8e-05 0.0014 19.2 4.1 1 23 1223 1245 1223 1245 0.98
33 42 0.00019 0.014 16.0 7.8 1 23 1264 1286 1264 1286 0.97
34 42 0.00023 0.017 15.7 2.1 1 23 1292 1314 1292 1314 0.98
35 42 1.2e-05 0.0009 19.7 2.1 1 23 1320 1342 1320 1342 0.99
36 42 1.5e-06 0.00011 22.5 2.8 1 23 1348 1370 1348 1370 0.99
37 42 9.3e-08 7e-06 26.4 0.9 1 23 1376 1398 1376 1398 0.99
38 42 4.9e-05 0.0036 17.8 0.2 1 23 1404 1426 1404 1426 0.98
39 42 1.3e-07 9.8e-06 25.9 3.5 1 23 1432 1454 1432 1454 0.99
40 42 0.00014 0.011 16.3 0.3 1 23 1461 1483 1461 1483 0.98
41 42 0.00088 0.066 13.9 0.8 1 23 1489 1511 1489 1511 0.93
42 42 0.00088 0.066 13.9 5.5 1 23 1517 1540 1517 1540 0.96

Sequence Information

Coding Sequence
ATGTTCTGTGAAAAGCTCTTTAAAAACAATCGTAGTTTGAAAAAACACCTGGTGTGTCATAGTGAAAATAGACCATATGCATGCACAAAATGCGACAGGCGATTCAAGCTCAAACACCAACTGACCAATCATCTGAGAGTTCACACAGATGACGTATGGTACGAATGCGACTTTTGTACAAAGAAGCTGAGATCGAAAGCCTATTGGGCGGTTCATAGAAAAAGACATACCAAGGAATACATTGCTAAATGCGAGGTTTGTGGCCAGGGCTTTGTAACAATCCAAGAATACAACCATCACATTGGCGCGAAACATGGAAACACGACCTACATGTGCTACATTTGTGGCCGAAGCTGCTATGACAAGGCAGTTTTGCAAAACCACTTGGAAACCCACGACGAAGACTATGGCAAAAACAAGCAAATCAAATGCGACCACTGCGACAAGACCTTCACCAGGATGAAGTACCTCAAGGGTCACATCGTCCGAGTCCACAAAGATGGAGGAGAGAGGTTTGTCTGCGATTACTGTGGCAAAGAGGTTCATTCGAAGACCAGTCTCAGGGACCATCTGTTGATCCATAAGGGCGTGAAACCCTTACAATGCCCTGAATGTGATAAGTGCTTCACCATTCGGAGTACCTTGAAGGCCCATCTGCGGACCCACACTGGAGACAGGCCGTACGATTGCAAAGAATGTGGTAAGGCGTTCACGCAGAGATCGCCGTTGATAATTCACATGCGGTACCATACTGGGGAGAGGCCGTACCGCTGCAATTTCTGTCAGAAGGGCTTTGTCAGCAAAGCGGTCATGAATCTGCATCAGAAGAAGTCTCATATTGTCGCattgaaaataaaaaagggaCAGAAAAATACTCGCCGTAGTACGAGAAACACTGTAAGGAATAAATCTTCGGTGGCCTTCAAAAGACGAAATCCTCAAGTGAAGGAGGAGCTGTATAGTTGCGATCAGTGTAAGATTCAATTCAAATGCAAAAGAGAGCTTAACAGACACGTAAAAAGTCACATAGAAGCTCCACCTATCATGACGAAGAAGTCGTCATTCCAGTGTGATTTTTGTATGAAGAATCTTGGCTCCAAAGGTGCCTGGAAGGTGCATAGGAAAAGACATCTACAGGAATACGTTGCAAAGTGTGAGGAGTGTGGCAGAGGTTTTGTAACGAACCAAGAATACAACAACCACGTTGGTGCAAAGCATGGTACTAGTAACCATATTTGCAGCGTATGTGGTAGAGCTTGCTATGATAAAGCGTCATTGCAGAGTCATATGGCTAGACATGCCGACAACTATACTACTAATACGAACATCAAATGTGAGCTGTGCGGTAAGACATTTCTGCAAGAACGATACCTGCGACATCACCACATGCGCATGCATCAGTCTGATGGCAGAAACTATGTTTGTGATCATTGCGGGAAAACTGTCAGTTCGAAACGTAGTCTGAGGGACCATCTTCTTCTCCACGAAGGATTGAAACCAATCGAATGTAAAGAATGTGGTCGTGGTTTCGCACTGCGAACAACATTGAAGCTCCACATGAGAACTCACACTGGTGACAGACCgtacaaatgcaagctttgCGAGAAATCCTTCACCCAGAAAACACCGTTAACAGTCCACATGCGAATTCATACCGGAGAAAGACCCTACTTGTGCATATTCTGTGATTCTGGaCGAAAAAAACAACTACCTGACATGAGCCGCATCCCGATCGATAACGAACCTGATGAAGAGAGTCCAGAGGGATATCACAGCTATAGTGGTGAAAAAATCTATGGACTACGAACTGGGAATAAGATAACATCTGGAATAATAATTCACAGTGAAATAAAACTGCTAAAGGTCTATggaaaacataaacaaaaaccACCACCTATTCAGGACTCGCAACGTTTCACGTGCTTGCAGTGCAAAGAGAACTTCAAATATAAGAGCACACTAGTTGTGCATATTCGCGTTCACGAAGAAAAACGTTTAATCCATTGCAAAAAATGTGGGATTGGTTTCCCGAACAAGAAACAGCTTAAGAAACACAAAGAAGACCATGAGTACGGTGGTAGATGTACTTGGTCACCTACTCCTTCTATAAAGATTGAAGACAGAAGAATAGAAGTTTGTGACCCTTTTCATTTCGTCTGCGAGCTTTGCGATGAAATTATATTAACCAGTATTCAGTTTGCCCTGCATTCAGTGATACACTCGCCAGATGGGTTGTATCACTGCACCTATTGTCTCTTCAACACCAAAAAGTCGAACGAACTATGCTTGCATATGGACAGTCACAGAGAACAAACTCATACGTACTTAGCATGTACGATCTGTAAAGATTTTTTTGACGATGGTGAAGTCTTTGCagaacacaaaaatattcatgatgGTACCATGCCTTTCAAATGTCAGCTGTGTGGCAAGGATTTCATGTTCTCTTGGCTCCTAAGAAGCCATCATCGTCTATTCCACTCAAGAGCAGTAACTGTCTTGAATGATAGAAAAGGAAATGACAATTGTAGCGTAATATCCCATCTCCAAAAGCACAAAATTTTTGAAGGGAAGCGAAATTCATTCGAATGTGTCGAATGTGGCAAGGATTTGAAATCCGAATACAACCTTGCAATGCATATGCCGAAGCACACAGGCGAGAAGCCTTTCATGTGCTTCACTTGCGGTCAAAGCTTCCGGTATAAAGGTAACCTTGCAACTCATCAGCAGTACCACACAGGAGATACTCCGTTCCAGTGTGAGCAATGCGGTGACAGGTTTGCGTTGAAGGCCGTCCTGAAGAAGCACATGGAGACTCACAGTGACATGAAGCCGCATGTGTGCTCGGAGTGTGGGAAGGGCTTCAAGAAGAACTGTCAGTTGACTGTTCATAAGCGCGTTCATACCAATGAAAGGCCGTTCAAGTGCAGCATGTGCGACAAGAGTTTCAAGCAGTGTGGGGCGTTGAGTACCCACTATTTCATGCATGGAGTGAAGCCCACAAAGCGTTATCAGTGTACGgttTGCAAAAAAGATTATGCActgaaaagatcactggagaaACACGTGTGCAAGAAAAAACAGCGCAATTGCTCAGAAAATCtaaatatatgcaaaatatgCCACAGGAGTTTCAGGAAGCACTGCTCGCTAGTCGAACATCTACGGACCCATACTGGGGAAAGACCGTTAAGGTCATCAGATCAACTGATATTCGAGCACATCCATGAGAACTGTTTCTGCTCAGAACTGTACGATGCTACAATCGATATCAATCTTCAACAGATCAAGCACTCCTTGGATGATATGTACTGTTGGGACCTCGCCAACTCCGCTGAACATACCAACAAGGAACGTCCAGCACTCAACGAAGATCGCCAGGAAGAAGACGACATTCTCAAAACCCTGCTTTCAGAACACGAACATCTGTTGAGTCCGGACTTCGATATTCCTATAAGCGACCCATTGTTGGACAACGACACAAGAAAAGACTACAAATGCGACAAATGTGGCAAAGTATTGACCTCAGAGGGCAACTTCAGAAGACATCTACGCAAACATGGAATTACCGAGGAACCTTACAAATGCGAGGCTTGCAACAAATCATTTCGAAGAAAATTCTACCTGAAGAAACACATACTGAGACAGTGCCAAATAAAGAAAACGTACACGTGCCAAAAATGCGACAGGGTTTTCACGAAAATTTCAAACTACGAGAAGCACATGCACATGCACTCTAGGTGCGAGGTCCGTGAACAAGAGGTAGTACTAGAGGCCATTAAAAGGCCTCACAAATGTGACCAGTGCGATAAACATTTCTCCACCAACTTTAACCTCAAGAAGCACAAGTTGAACCATGCTGAAGAAAAGCCATTCAAGTGTAGTAACTGTAGCAGATCTTTTACTGAAAGATACAAGTTGGTATCCCATGAGCGAGTCCATACTGGAGAGAGACCGTTCAAGTGTGCCCAATGtgaaaaatcatttaataaaacaGAATCTCTGACGAACCATTTACGAACCCATACAGGGGAGAAACCTTATAGTTGCAGCCACTGTGGCAAGCGCTTTAGTGCCAGTGGTGGTTTGGCCCATCACATGCGGACTCATAGTGATGAAAAACCGTTTCAGTGCAAAATATGTGGaaagtctttcaaaaaaaaCGATGCGCTTGTGGTACATACCAGAACGCATACCGGCGAAAAACCGTTCGTATGTACGATCTGTGATAGAGGATTCGTCGAGAAGGACAAATTGGTGCAGCATATGACTATCCACACTGGGGAAAGACCTTTCAAATGCCCGAAGTGCGATAAGGCTTTCATCAAGCAGTACCTTCTCACTCACCACATGAGGACCCATTCCAATACTACTAAACCGTACAAATGTCAAAAATGCGGTTGGAGCTTCGTCAGCCAAGCAGGTTTTGATGATCACAATAGGGTTCATCTTCAAGAAAAACCGTACAATTGCACCGTATGTGGCAAGTGTTTCGCAAAAAGTAACGTACTTGTAGATCATATGCCCACTCACACTGGCGAGACGCCTCACAAGTGTCTTATTTGCGATAAAAGTTTTAAATTCAGGAGTGCGCTGTGCATTCACAATAAAAAAGAGCATCCGATGAGATAA
Protein Sequence
MFCEKLFKNNRSLKKHLVCHSENRPYACTKCDRRFKLKHQLTNHLRVHTDDVWYECDFCTKKLRSKAYWAVHRKRHTKEYIAKCEVCGQGFVTIQEYNHHIGAKHGNTTYMCYICGRSCYDKAVLQNHLETHDEDYGKNKQIKCDHCDKTFTRMKYLKGHIVRVHKDGGERFVCDYCGKEVHSKTSLRDHLLIHKGVKPLQCPECDKCFTIRSTLKAHLRTHTGDRPYDCKECGKAFTQRSPLIIHMRYHTGERPYRCNFCQKGFVSKAVMNLHQKKSHIVALKIKKGQKNTRRSTRNTVRNKSSVAFKRRNPQVKEELYSCDQCKIQFKCKRELNRHVKSHIEAPPIMTKKSSFQCDFCMKNLGSKGAWKVHRKRHLQEYVAKCEECGRGFVTNQEYNNHVGAKHGTSNHICSVCGRACYDKASLQSHMARHADNYTTNTNIKCELCGKTFLQERYLRHHHMRMHQSDGRNYVCDHCGKTVSSKRSLRDHLLLHEGLKPIECKECGRGFALRTTLKLHMRTHTGDRPYKCKLCEKSFTQKTPLTVHMRIHTGERPYLCIFCDSGRKKQLPDMSRIPIDNEPDEESPEGYHSYSGEKIYGLRTGNKITSGIIIHSEIKLLKVYGKHKQKPPPIQDSQRFTCLQCKENFKYKSTLVVHIRVHEEKRLIHCKKCGIGFPNKKQLKKHKEDHEYGGRCTWSPTPSIKIEDRRIEVCDPFHFVCELCDEIILTSIQFALHSVIHSPDGLYHCTYCLFNTKKSNELCLHMDSHREQTHTYLACTICKDFFDDGEVFAEHKNIHDGTMPFKCQLCGKDFMFSWLLRSHHRLFHSRAVTVLNDRKGNDNCSVISHLQKHKIFEGKRNSFECVECGKDLKSEYNLAMHMPKHTGEKPFMCFTCGQSFRYKGNLATHQQYHTGDTPFQCEQCGDRFALKAVLKKHMETHSDMKPHVCSECGKGFKKNCQLTVHKRVHTNERPFKCSMCDKSFKQCGALSTHYFMHGVKPTKRYQCTVCKKDYALKRSLEKHVCKKKQRNCSENLNICKICHRSFRKHCSLVEHLRTHTGERPLRSSDQLIFEHIHENCFCSELYDATIDINLQQIKHSLDDMYCWDLANSAEHTNKERPALNEDRQEEDDILKTLLSEHEHLLSPDFDIPISDPLLDNDTRKDYKCDKCGKVLTSEGNFRRHLRKHGITEEPYKCEACNKSFRRKFYLKKHILRQCQIKKTYTCQKCDRVFTKISNYEKHMHMHSRCEVREQEVVLEAIKRPHKCDQCDKHFSTNFNLKKHKLNHAEEKPFKCSNCSRSFTERYKLVSHERVHTGERPFKCAQCEKSFNKTESLTNHLRTHTGEKPYSCSHCGKRFSASGGLAHHMRTHSDEKPFQCKICGKSFKKNDALVVHTRTHTGEKPFVCTICDRGFVEKDKLVQHMTIHTGERPFKCPKCDKAFIKQYLLTHHMRTHSNTTKPYKCQKCGWSFVSQAGFDDHNRVHLQEKPYNCTVCGKCFAKSNVLVDHMPTHTGETPHKCLICDKSFKFRSALCIHNKKEHPMR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-