Bsil017541.1
Basic Information
- Insect
- Bruchidius siliquastri
- Gene Symbol
- SMARCC2
- Assembly
- GCA_949316355.1
- Location
- OX438538.1:6369080-6374303[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7 2.6e+03 -1.2 0.0 31 43 197 210 192 212 0.84 2 2 6.8e-14 6.5e-11 42.3 0.2 3 44 596 637 594 639 0.95
Sequence Information
- Coding Sequence
- ATGTTGTCCGTTGGCCCTAAAATGGATGGGGGACCAAATATCAAGTATTTTGAGTCCCCGGAGACTCTTACAGCTTTGGAAGGAGTGAAACAGTGGCTCCAGAAGAATGCCAAAAAGCATGTACAAAATGATCAACTTACAAACAAGACCTTATCCAGCACAACAATCCAGTTTTTGCAATTTCAAGAAGATTTTTTGGGCAAAAATGCTCATAAGCCTCCAATGACTCGAATTCCTgtGAAGTACTTTATTGACTTCAAACCTGGAGGGGGTTTGTGCCAAATATTTTTAGCTGCTTATCGTTTCAAAAGCGAGCATGGTTGGAGAAGATTTGAATTGCCTTCAGGAAAGaatgtttcAAAGCTGGAAAAGGTATACGAAATGTTCCAGTCAATTGAAAAGGCTCTCATCAATGCCAAGATGTATGCATTACCAATTGTGTATATAAAATCTGATGTGGAAAAAGGTGTACAGCAGAAAGTGAAGGAAATAATTAGGCGTAGAAATGGACAAGTAATAGAAAATGAGGAAACAGCAACTCACATAATATATGGATCTGTTGACCCATTGAAAGAGGAATATGGCAGACCTGTTACAAGACGAGATAAGATGGTAATGATGCACTGGTACTATTTTCCCAATTCATTTGACACATGGGTGAATTTGGAAAGTGTTGGCTTAGATGGACTATCAATGGAAAATGAAAGCCCCAGGTCTGGCCCCTGGAGGGTGAGTTGTACATGGGTATATGATACTGATCAGTACAATGAATGGATGTCAGAAGAAGATTATGAAGTGGATGAAAGTGGTGTGAAGAAGGTCCATCCTAGGCTTATGTCAGTGGAAGATCTTATGAATCCCTCTGAGGacagaaacaagaaaaataaaggGGGTAAAAGGAAAAGATCACCTTCCCCTCCATCATCTAAAGTTGGTAAAAGGAAAAGTGGGAGGAGCCCAGCTGTGGGAAAGAAAACTAGACCTGAAGATCCTGAATCAGAAGATCTGACAAAAGATATGGAGGAACCTACACCAGAGCCAAATATTGTTGAAGTAAATTCAAATGGTTCAAATAGCCAACCTACAAAGAAGGATCATGAGTTACAACCACTTAAAGGAGGCTCTATAACAGATTTAGAAGAATCTGAAGATAGAGGTGAAGATTCTCAAACTGGCAAAAACAGTGACAGTAATACCCAGGATGATGGGCAAGAAGATAATGTTACAGAACAAACTCACCATATAATAATTCCCTCTTATTCAGCATGGTTTGACTACAACTCAATCCATGAAGTCGAGAAAAGGGCGTTGCCAGAGTTTTTCAATGGTAGAAACAAGTCAAAAACACCTGAAATCTATCTTGCTTATAGAAACTTCATGATTGACACTTACCGTCTCAATCCCACTGAATATATAACTAGTACAGCATGTAGACGTAACTTAGCAGGTGATGTGTGTGCTATCATGAGAGTACATGCCTTTTTAGAGCAATGGGGACTGATCAATTATCAAGTTGACACAGACTCTAGACCTACTGCCATGGGTCCTCCACCCACCTCACATTTCCATATTTTGTCTGATACACCTTCAGGCTTACAACCTGTAAATCCTCCAAAAACTCCACAACCTAGTGCTGCAAAAACACTGTTAGACTTGGATAAGCCCCAAGAAACTAAAAAACCAGAAGCAACTGCTCCAGAAATGTCAAGCTTTGGTCTGAAGTTGGATCAGTATGCTAAAAAGCCAGCTGTCCTCAGAAATAAAAGCGCCGCATCTTTGACTAGGGATTGGACAGAACAAGAAACTTTACTCTTGTTAGAAGGTTTGGAAATGTATAAAGACGATTGGAACAAAGTTTGTGAACATGTGAGTTCACGTACTCAGGACGAGTGTATTCTTCATTTCTTGAGACTCCCCATAGAGGATCCGTATTTGGAAGATCCAGAAGCTGGTGGAGCTCTGGGACCACTAGCCTACCAACCAATTCCTTTTAGTAAAGCTGGAAATCCAATAATGTCAACAGTTGCTTTCCTAGCTTCCATAGTGGATCCCAGAGTAGCAGCTGCTGCTGCCAAATCTGCAATGAATGAATTTGCAAGCATCAAAGATGAAGTACCTGCTGCTGTGATGGATgctcatttgaaaaatgttgaagcTTCAAGTGCAGAAGGTAAATACGACCCCGCCGCTAATCTTGCTCTTACTGGTATTGCTGGAACTGGTCCAGAGAAAGAAGACGATGAAAAAGTCAAGAAAGAGGAAGgcaaagaagaagaaaagtctGAGCAAAAGAAAGCTACTGACGGGCAAGAGGAAAAGTCTAGCGATAAAGTCAAATCTGAGGCTTCAGATAGTGAAAAAGATGAGAAAATGGAAGTATCTGACATGAAAACAGAGAAGACTATCAAAGATAGTGAGATGCAAAGTGCAGCTGCTGCAGCACTAGCAGCTGCCGCCGTGAAAGCTAAACACTTGGCCGCTGTAGAAGAGAGGAAAATTAAATCCTTGGTCGCTTTGCTTGTTGAAACGCAAATGAAAAAGTTAGAAATCAAACTAAGACATTTTGAAGAGCTAGAGACAACAATGGAAAGGGAGCGAGAAGGCCTTGAATACCAGAGGCAACAGTTGATCACAGAACGTCAACAGTTCCACTTGGAACAGCTGAAGGCAGCTGAATTCAGAGCAAGGCAACAGGCACATCAAAGACTCCAAGCTGAGCAAGGGCAATGGCCTGCCCAACAGCAACAAACAGCTCATAGTGCACCAACTGGAGAAAGTGGACCCAGTACTACACCAACACCACCATCTCCACAAGCATCAGCTGTAGCCTCTCCACAAGCTCCTCCTCACCACCATATATAG
- Protein Sequence
- MLSVGPKMDGGPNIKYFESPETLTALEGVKQWLQKNAKKHVQNDQLTNKTLSSTTIQFLQFQEDFLGKNAHKPPMTRIPVKYFIDFKPGGGLCQIFLAAYRFKSEHGWRRFELPSGKNVSKLEKVYEMFQSIEKALINAKMYALPIVYIKSDVEKGVQQKVKEIIRRRNGQVIENEETATHIIYGSVDPLKEEYGRPVTRRDKMVMMHWYYFPNSFDTWVNLESVGLDGLSMENESPRSGPWRVSCTWVYDTDQYNEWMSEEDYEVDESGVKKVHPRLMSVEDLMNPSEDRNKKNKGGKRKRSPSPPSSKVGKRKSGRSPAVGKKTRPEDPESEDLTKDMEEPTPEPNIVEVNSNGSNSQPTKKDHELQPLKGGSITDLEESEDRGEDSQTGKNSDSNTQDDGQEDNVTEQTHHIIIPSYSAWFDYNSIHEVEKRALPEFFNGRNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDTDSRPTAMGPPPTSHFHILSDTPSGLQPVNPPKTPQPSAAKTLLDLDKPQETKKPEATAPEMSSFGLKLDQYAKKPAVLRNKSAASLTRDWTEQETLLLLEGLEMYKDDWNKVCEHVSSRTQDECILHFLRLPIEDPYLEDPEAGGALGPLAYQPIPFSKAGNPIMSTVAFLASIVDPRVAAAAAKSAMNEFASIKDEVPAAVMDAHLKNVEASSAEGKYDPAANLALTGIAGTGPEKEDDEKVKKEEGKEEEKSEQKKATDGQEEKSSDKVKSEASDSEKDEKMEVSDMKTEKTIKDSEMQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLQAEQGQWPAQQQQTAHSAPTGESGPSTTPTPPSPQASAVASPQAPPHHHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01121544;
- 90% Identity
- -
- 80% Identity
- -