Bsil016945.1
Basic Information
- Insect
- Bruchidius siliquastri
- Gene Symbol
- -
- Assembly
- GCA_949316355.1
- Location
- OX438537.1:20701307-20702134[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-11 1.7e-08 34.2 0.3 5 42 1 38 1 39 0.95
Sequence Information
- Coding Sequence
- ATGGCTAAAGCCATTGAAGCTCTTAGAGCGAAAAAACTTGGCCTGAAAAAAGCAAGCAAAACATATAGTGTGCCCAGATCGACGCTTCAAAGACTAGCAAAGGTAAAATACGGCAGCCCTGTGAAATCTTCGCGCACAAGAATTGGAAGGCCCACTGTTTTAAATGAAGTGTTAGAAAATGAGTTAGTTAAATATTGTCTTGCTATGGAGGAATCATTTTTTGGACTAACGCATGCAGACCTGCGAAGAATGGCTGCACAGCTGGCCGTAAGAAACAATCTCAAGCATCCATTTGGTGATGATATGGCTGGAAGAAAGTGGGTCAGGCTGTTTCTTAAACGCTACCAAACAAAGCTCTCCGTAAGAAAGCCTACCGGAACATCTTATTCCAGAGCGCTGGggtttagcaaaaaaaatgtgaaagtcTTCTTCAATCATCTTATGGACCTCTACGAGAAAGGAAAATATACTCCGGATAGAATATTCAACGTCGATGAGAGTGGGATCTCAAGTGTGCAGTCGAAAGTGGCAAGAGTAGTTGGCCTTCGAGGAAAAAGACAAATCATATCTTTGACATCTCCTGAGCGTGGATCCTTAATCACAATTGTTGTATGCATGAATGCTGTAGGAACATTTGTTCCTCCTCTCGTAATCTTTCctagaaaatatgaatgtcCTTCTGGCACTCCTAAATCTACACAAATAGGGGCATCAATGTCTTCTCATGTGAGTCCATTTGAAATAACTCCAATTCCACaagtgtacaaaaaaatttcgaCGAGAGGAAGAAAGGCCTGCAAATCTCATCATTTGCCTCAGGAAAGTTAG
- Protein Sequence
- MAKAIEALRAKKLGLKKASKTYSVPRSTLQRLAKVKYGSPVKSSRTRIGRPTVLNEVLENELVKYCLAMEESFFGLTHADLRRMAAQLAVRNNLKHPFGDDMAGRKWVRLFLKRYQTKLSVRKPTGTSYSRALGFSKKNVKVFFNHLMDLYEKGKYTPDRIFNVDESGISSVQSKVARVVGLRGKRQIISLTSPERGSLITIVVCMNAVGTFVPPLVIFPRKYECPSGTPKSTQIGASMSSHVSPFEITPIPQVYKKISTRGRKACKSHHLPQES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00416103; iTF_00248873; iTF_00248881;
- 90% Identity
- iTF_00248881;
- 80% Identity
- -